RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 MROH1Q8NDA8 1641 aa9.52□□□□□ -0.89
CBWD3-215ENST00000619322 SSUH2Q9Y2M2 353 aa9.52□□□□□ -0.89
CBWD3-215ENST00000619322 MED14O60244 1454 aa9.52□□□□□ -0.89
CBWD3-215ENST00000619322 LTBP4Q8N2S1 1624 aa9.52□□□□□ -0.89
CBWD3-215ENST00000619322 GCC2Q8IWJ2 1684 aa9.52□□□□□ -0.89
CBWD3-215ENST00000619322 IQGAP3Q86VI3 1631 aa9.51□□□□□ -0.89
CBWD3-215ENST00000619322 PRAG1Q86YV5 1406 aa9.51□□□□□ -0.89
CBWD3-215ENST00000619322 UGGT1Q9NYU2 1555 aa9.5□□□□□ -0.89
CBWD3-215ENST00000619322 TCOF1Q13428 1488 aaKnown RBP9.5□□□□□ -0.89
CBWD3-215ENST00000619322 ATP7AQ04656 1500 aa9.49□□□□□ -0.89
CBWD3-215ENST00000619322 PIK3C2BO00750 1634 aa9.49□□□□□ -0.89
CBWD3-215ENST00000619322 CLIP1P30622 1438 aa9.48□□□□□ -0.89
CBWD3-215ENST00000619322 UNC13BO14795 1591 aa9.48□□□□□ -0.89
CBWD3-215ENST00000619322 CPS1P31327 1500 aa9.48□□□□□ -0.89
CBWD3-215ENST00000619322 DIP2AQ14689 1571 aa9.47□□□□□ -0.89
CBWD3-215ENST00000619322 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
CBWD3-215ENST00000619322 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
CBWD3-215ENST00000619322 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
CBWD3-215ENST00000619322 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
CBWD3-215ENST00000619322 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
CBWD3-215ENST00000619322 PROM2Q8N271 834 aa9.46□□□□□ -0.9
CBWD3-215ENST00000619322 CAMSAP1Q5T5Y3 1602 aa9.45□□□□□ -0.9
CBWD3-215ENST00000619322 ARHGAP31Q2M1Z3 1444 aa9.45□□□□□ -0.9
CBWD3-215ENST00000619322 DNMT1P26358 1616 aaKnown RBP9.44□□□□□ -0.9
CBWD3-215ENST00000619322 ADGRL2O95490 1459 aa9.44□□□□□ -0.9
CBWD3-215ENST00000619322 SLIT1O75093 1534 aa9.44□□□□□ -0.9
CBWD3-215ENST00000619322 CEP170BQ9Y4F5 1589 aaPredicted RBP9.43□□□□□ -0.9
CBWD3-215ENST00000619322 UBR1Q8IWV7 1749 aa9.43□□□□□ -0.9
CBWD3-215ENST00000619322 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
CBWD3-215ENST00000619322 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
CBWD3-215ENST00000619322 MIA2Q96PC5 1412 aa9.42□□□□□ -0.9
CBWD3-215ENST00000619322 ALKQ9UM73 1620 aa9.42□□□□□ -0.9
CBWD3-215ENST00000619322 MBD5Q9P267 1494 aa9.41□□□□□ -0.9
CBWD3-215ENST00000619322 NLRP1Q9C000 1473 aa9.41□□□□□ -0.9
CBWD3-215ENST00000619322 EFCAB6Q5THR3 1501 aa9.41□□□□□ -0.9
CBWD3-215ENST00000619322 NCOA1Q15788 1441 aa9.4□□□□□ -0.9
CBWD3-215ENST00000619322 PZPP20742 1482 aa9.4□□□□□ -0.9
CBWD3-215ENST00000619322 PITPNM1O00562 1244 aa9.4□□□□□ -0.9
CBWD3-215ENST00000619322 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
CBWD3-215ENST00000619322 XIRP1Q702N8 1843 aaKnown RBP9.39□□□□□ -0.91
CBWD3-215ENST00000619322 ARHGAP23Q9P227 1491 aa9.39□□□□□ -0.91
CBWD3-215ENST00000619322 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
CBWD3-215ENST00000619322 GPATCH8Q9UKJ3 1502 aaKnown RBP9.38□□□□□ -0.91
CBWD3-215ENST00000619322 TET3O43151 1660 aa9.38□□□□□ -0.91
CBWD3-215ENST00000619322 IQGAP1P46940 1657 aa9.38□□□□□ -0.91
CBWD3-215ENST00000619322 A2ML1A8K2U0 1454 aa9.37□□□□□ -0.91
CBWD3-215ENST00000619322 RPRD2Q5VT52 1461 aaKnown RBP9.37□□□□□ -0.91
CBWD3-215ENST00000619322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.37□□□□□ -0.91
CBWD3-215ENST00000619322 ABCC3O15438 1527 aa9.36□□□□□ -0.91
CBWD3-215ENST00000619322 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
CBWD3-215ENST00000619322 DUOX2Q9NRD8 1548 aa9.36□□□□□ -0.91
CBWD3-215ENST00000619322 ERBINQ96RT1 1412 aa9.35□□□□□ -0.91
CBWD3-215ENST00000619322 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
CBWD3-215ENST00000619322 CEP152O94986 1710 aa9.34□□□□□ -0.91
CBWD3-215ENST00000619322 KNDC1Q76NI1 1749 aa9.34□□□□□ -0.91
CBWD3-215ENST00000619322 NCOA3Q9Y6Q9 1424 aa9.33□□□□□ -0.92
CBWD3-215ENST00000619322 AKT1S1Q96B36 256 aa9.33□□□□□ -0.92
CBWD3-215ENST00000619322 ARHGAP5Q13017 1502 aa9.33□□□□□ -0.92
CBWD3-215ENST00000619322 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
CBWD3-215ENST00000619322 TRAPPC8Q9Y2L5 1435 aa9.33□□□□□ -0.92
CBWD3-215ENST00000619322 CCDC141Q6ZP82 1450 aa9.32□□□□□ -0.92
CBWD3-215ENST00000619322 SYCP2Q9BX26 1530 aa9.32□□□□□ -0.92
CBWD3-215ENST00000619322 CHADLQ6NUI6 762 aa9.31□□□□□ -0.92
CBWD3-215ENST00000619322 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
CBWD3-215ENST00000619322 SETD1AO15047 1707 aaKnown RBP9.31□□□□□ -0.92
CBWD3-215ENST00000619322 IFT172Q9UG01 1749 aa9.3□□□□□ -0.92
CBWD3-215ENST00000619322 SHPRHQ149N8 1683 aa9.29□□□□□ -0.92
CBWD3-215ENST00000619322 A2MP01023 1474 aa9.29□□□□□ -0.92
CBWD3-215ENST00000619322 RSPH4AQ5TD94 716 aa9.29□□□□□ -0.92
CBWD3-215ENST00000619322 FAM9AQ8IZU1 332 aaPredicted RBP9.29□□□□□ -0.92
CBWD3-215ENST00000619322 LRRC9Q6ZRR7 1453 aa9.28□□□□□ -0.92
CBWD3-215ENST00000619322 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
CBWD3-215ENST00000619322 XRN1Q8IZH2 1706 aaKnown RBP9.27□□□□□ -0.93
CBWD3-215ENST00000619322 STRCP1A6NGW2 1772 aa9.27□□□□□ -0.93
CBWD3-215ENST00000619322 ADGRB3O60242 1522 aa9.27□□□□□ -0.93
CBWD3-215ENST00000619322 NKTRP30414 1462 aaKnown RBP9.25□□□□□ -0.93
CBWD3-215ENST00000619322 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
CBWD3-215ENST00000619322 COL22A1Q8NFW1 1626 aaPredicted RBP9.25□□□□□ -0.93
CBWD3-215ENST00000619322 SCAPERQ9BY12 1400 aa9.24□□□□□ -0.93
CBWD3-215ENST00000619322 UHRF1BP1Q6BDS2 1440 aa9.24□□□□□ -0.93
CBWD3-215ENST00000619322 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.23□□□□□ -0.93
CBWD3-215ENST00000619322 CHRDL2Q6WN34 429 aa9.23□□□□□ -0.93
CBWD3-215ENST00000619322 SETBP1Q9Y6X0 1596 aa9.23□□□□□ -0.93
CBWD3-215ENST00000619322 NHSL1Q5SYE7 1610 aa9.22□□□□□ -0.93
CBWD3-215ENST00000619322 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
CBWD3-215ENST00000619322 AHDC1Q5TGY3 1603 aaPredicted RBP9.22□□□□□ -0.93
CBWD3-215ENST00000619322 SPHKAPQ2M3C7 1700 aa9.21□□□□□ -0.93
CBWD3-215ENST00000619322 TMEM131LA2VDJ0 1609 aa9.2□□□□□ -0.94
CBWD3-215ENST00000619322 VPS8Q8N3P4 1428 aa9.2□□□□□ -0.94
CBWD3-215ENST00000619322 FBXO41Q8TF61 875 aa9.2□□□□□ -0.94
CBWD3-215ENST00000619322 DHX29Q7Z478 1369 aaKnown RBP9.2□□□□□ -0.94
CBWD3-215ENST00000619322 ERVK-7P63135 1459 aa9.19□□□□□ -0.94
CBWD3-215ENST00000619322 MARF1Q9Y4F3 1742 aaKnown RBP9.19□□□□□ -0.94
CBWD3-215ENST00000619322 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
CBWD3-215ENST00000619322 NOS1P29475 1434 aa9.17□□□□□ -0.94
CBWD3-215ENST00000619322 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
CBWD3-215ENST00000619322 SPDYE1Q8NFV5 336 aaPredicted RBP9.17□□□□□ -0.94
CBWD3-215ENST00000619322 ROCK1Q13464 1354 aa9.17□□□□□ -0.94
CBWD3-215ENST00000619322 EFCAB2Q5VUJ9 269 aa9.16□□□□□ -0.94
CBWD3-215ENST00000619322 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms