RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 LMOD2Q6P5Q4 547 aa8.9□□□□□ -0.99
CSMD2-210ENST00000619121 TXLNBQ8N3L3 684 aa8.9□□□□□ -0.99
CSMD2-210ENST00000619121 MORC1Q86VD1 984 aa8.9□□□□□ -0.99
CSMD2-210ENST00000619121 WASHC2CQ9Y4E1 1318 aa8.89□□□□□ -0.99
CSMD2-210ENST00000619121 DDX58O95786 925 aaKnown RBP8.89□□□□□ -0.99
CSMD2-210ENST00000619121 PPP4R2Q9NY27 417 aa8.89□□□□□ -0.99
CSMD2-210ENST00000619121 VPS8Q8N3P4 1428 aa8.89□□□□□ -0.99
CSMD2-210ENST00000619121 HSP90AB4PQ58FF6 505 aa8.89□□□□□ -0.99
CSMD2-210ENST00000619121 IPO7O95373 1038 aaKnown RBP8.88□□□□□ -0.99
CSMD2-210ENST00000619121 DESP17661 470 aa8.88□□□□□ -0.99
CSMD2-210ENST00000619121 CTDP1Q9Y5B0 961 aaPredicted RBP8.88□□□□□ -0.99
CSMD2-210ENST00000619121 ZBTB7CA1YPR0 619 aa8.88□□□□□ -0.99
CSMD2-210ENST00000619121 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
CSMD2-210ENST00000619121 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
CSMD2-210ENST00000619121 WDHD1O75717 1129 aaPredicted RBP8.88□□□□□ -0.99
CSMD2-210ENST00000619121 EVC2Q86UK5 1308 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 CADPSQ9ULU8 1353 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 EFCAB5A4FU69 1503 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 KIF21AQ7Z4S6 1674 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 DAPK1P53355 1430 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 SMG6Q86US8 1419 aaKnown RBP8.87□□□□□ -0.99
CSMD2-210ENST00000619121 CGNL1Q0VF96 1302 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 CCDC88BA6NC98 1476 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 XBP1P17861 261 aa8.87□□□□□ -0.99
CSMD2-210ENST00000619121 SKOR2Q2VWA4 1001 aaPredicted RBP8.87□□□□□ -0.99
CSMD2-210ENST00000619121 CCDC144AA2RUR9 1427 aa8.86□□□□□ -0.99
CSMD2-210ENST00000619121 DRC7Q8IY82 874 aa8.86□□□□□ -0.99
CSMD2-210ENST00000619121 CECR2Q9BXF3 1484 aa8.86□□□□□ -0.99
CSMD2-210ENST00000619121 ZRSR2Q15696 482 aaKnown RBP8.86□□□□□ -0.99
CSMD2-210ENST00000619121 CAGE1Q8TC20 777 aa8.86□□□□□ -0.99
CSMD2-210ENST00000619121 ARID3CA6NKF2 412 aa8.86□□□□□ -0.99
CSMD2-210ENST00000619121 LAMC3Q9Y6N6 1575 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 CLSTN1O94985 981 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 GTF2E1P29083 439 aaPredicted RBP8.85□□□□□ -0.99
CSMD2-210ENST00000619121 RRP7BPQ9NSQ0 103 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 ERICH2A1L162 156 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 CSB-PGBD3P0DP91 1061 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 OSCARQ8IYS5 282 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 KIF7Q2M1P5 1343 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 EVA1CP58658 441 aa8.85□□□□□ -0.99
CSMD2-210ENST00000619121 R3HCC1Q9Y3T6 440 aaKnown RBP8.85□□□□□ -0.99
CSMD2-210ENST00000619121 HIP1O00291 1037 aa8.84□□□□□ -0.99
CSMD2-210ENST00000619121 BRMS1Q9HCU9 246 aa8.84□□□□□ -0.99
CSMD2-210ENST00000619121 U2SURPO15042 1029 aaKnown RBP8.84□□□□□ -0.99
CSMD2-210ENST00000619121 FRAT2O75474 233 aaPredicted RBP8.84□□□□□ -0.99
CSMD2-210ENST00000619121 ITSN2Q9NZM3 1697 aa8.83□□□□□ -1
CSMD2-210ENST00000619121 SUPT16HQ9Y5B9 1047 aaKnown RBP8.83□□□□□ -1
CSMD2-210ENST00000619121 KIF15Q9NS87 1388 aa8.83□□□□□ -1
CSMD2-210ENST00000619121 SLC3A2P08195 630 aaKnown RBP8.83□□□□□ -1
CSMD2-210ENST00000619121 PSME1Q06323 249 aa8.83□□□□□ -1
CSMD2-210ENST00000619121 HECW1Q76N89 1606 aa8.83□□□□□ -1
CSMD2-210ENST00000619121 RGL3Q3MIN7 710 aa8.83□□□□□ -1
CSMD2-210ENST00000619121 TRDNQ13061 729 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 CENPJQ9HC77 1338 aaPredicted RBP8.82□□□□□ -1
CSMD2-210ENST00000619121 DCAF11Q8TEB1 546 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 ACBD3Q9H3P7 528 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 TRIM29Q14134 588 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 FYCO1Q9BQS8 1478 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 FEZ1Q99689 392 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 AMPHP49418 695 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 MARCH6O60337 910 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 ANKRD18AQ8IVF6 992 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
CSMD2-210ENST00000619121 LUC7LQ9NQ29 371 aaKnown RBP8.82□□□□□ -1
CSMD2-210ENST00000619121 HSP90AA2PQ14568 343 aaPredicted RBP8.82□□□□□ -1
CSMD2-210ENST00000619121 ERICH3Q5RHP9 1530 aa8.81□□□□□ -1
CSMD2-210ENST00000619121 CCDC173Q0VFZ6 552 aa8.81□□□□□ -1
CSMD2-210ENST00000619121 ANKRD30BQ9BXX2 1392 aa8.81□□□□□ -1
CSMD2-210ENST00000619121 PIP4K2AP48426 406 aaPredicted RBP8.81□□□□□ -1
CSMD2-210ENST00000619121 CC2D2AQ9P2K1 1620 aa8.81□□□□□ -1
CSMD2-210ENST00000619121 WIZO95785 1651 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 LAS1LQ9Y4W2 734 aaKnown RBP8.8□□□□□ -1
CSMD2-210ENST00000619121 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 REC8O95072 547 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 SF3B2Q13435 895 aaKnown RBP8.8□□□□□ -1
CSMD2-210ENST00000619121 NLRP13Q86W25 1043 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 PRM3Q9NNZ6 103 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 MYOM3Q5VTT5 1437 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 RASSF8Q8NHQ8 419 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 CCP110O43303 1012 aa8.8□□□□□ -1
CSMD2-210ENST00000619121 NGDNQ8NEJ9 315 aaKnown RBP8.8□□□□□ -1
CSMD2-210ENST00000619121 ZKSCAN1P17029 563 aaPredicted RBP8.8□□□□□ -1
CSMD2-210ENST00000619121 GOLGA6L3A6NEY3 463 aa8.79□□□□□ -1
CSMD2-210ENST00000619121 GOLGA6L19H0YKK7 550 aa8.79□□□□□ -1
CSMD2-210ENST00000619121 COG3Q96JB2 828 aa8.79□□□□□ -1
CSMD2-210ENST00000619121 ISY1Q9ULR0 285 aaKnown RBP8.79□□□□□ -1
CSMD2-210ENST00000619121 PAK3O75914 559 aaPredicted RBP8.79□□□□□ -1
CSMD2-210ENST00000619121 MCM2P49736 904 aa8.79□□□□□ -1
CSMD2-210ENST00000619121 CCDC43Q96MW1 224 aaKnown RBP8.79□□□□□ -1
CSMD2-210ENST00000619121 CHMP5Q9NZZ3 219 aa8.79□□□□□ -1
CSMD2-210ENST00000619121 NINLQ9Y2I6 1382 aa8.79□□□□□ -1
CSMD2-210ENST00000619121 SYNJ2O15056 1496 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 DHX57Q6P158 1386 aaKnown RBP8.78□□□□□ -1
CSMD2-210ENST00000619121 DHX16O60231 1041 aaKnown RBP8.78□□□□□ -1
CSMD2-210ENST00000619121 DCTN1Q14203 1278 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 TPD52L1Q16890 204 aaPredicted RBP8.78□□□□□ -1
CSMD2-210ENST00000619121 ZNF287Q9HBT7 754 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
CSMD2-210ENST00000619121 HMGXB3Q12766 1538 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 SART3Q15020 963 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms