RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 MAST1Q9Y2H9 1570 aa23.17■■□□□ 1.3
SEMA3B-213ENST00000618865 RSPH4AQ5TD94 716 aa23.17■■□□□ 1.3
SEMA3B-213ENST00000618865 CARD11Q9BXL7 1154 aa23.15■■□□□ 1.3
SEMA3B-213ENST00000618865 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
SEMA3B-213ENST00000618865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.15■■□□□ 1.32e-7■■□□□ 14.1
SEMA3B-213ENST00000618865 UNC13BO14795 1591 aa23.14■■□□□ 1.29
SEMA3B-213ENST00000618865 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
SEMA3B-213ENST00000618865 PLEKHH2Q8IVE3 1493 aa23.12■■□□□ 1.29
SEMA3B-213ENST00000618865 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
SEMA3B-213ENST00000618865 IRX6P78412 446 aaPredicted RBP23.11■■□□□ 1.29
SEMA3B-213ENST00000618865 PLXNC1O60486 1568 aa23.1■■□□□ 1.29
SEMA3B-213ENST00000618865 ST20-MTHFSA0A0A6YYL1 179 aa23.09■■□□□ 1.29
SEMA3B-213ENST00000618865 CCDC144AA2RUR9 1427 aa23.07■■□□□ 1.28
SEMA3B-213ENST00000618865 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
SEMA3B-213ENST00000618865 PLCH2O75038 1416 aa23.06■■□□□ 1.28
SEMA3B-213ENST00000618865 IQGAP3Q86VI3 1631 aa23.06■■□□□ 1.28
SEMA3B-213ENST00000618865 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
SEMA3B-213ENST00000618865 ROCK2O75116 1388 aaKnown RBP23.04■■□□□ 1.28
SEMA3B-213ENST00000618865 PLEKHG5O94827 1062 aa23.04■■□□□ 1.28
SEMA3B-213ENST00000618865 ARID4BQ4LE39 1312 aaPredicted RBP23.04■■□□□ 1.28
SEMA3B-213ENST00000618865 PRAG1Q86YV5 1406 aa23.03■■□□□ 1.28
SEMA3B-213ENST00000618865 TRAPPC8Q9Y2L5 1435 aa23.02■■□□□ 1.28
SEMA3B-213ENST00000618865 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.28
SEMA3B-213ENST00000618865 DUOX2Q9NRD8 1548 aa23.02■■□□□ 1.28
SEMA3B-213ENST00000618865 ZBED9Q6R2W3 1325 aa23.02■■□□□ 1.27
SEMA3B-213ENST00000618865 NBPF1Q3BBV0 1214 aa23.01■■□□□ 1.27
SEMA3B-213ENST00000618865 A2MP01023 1474 aa23.01■■□□□ 1.27
SEMA3B-213ENST00000618865 ABCC1P33527 1531 aa23.01■■□□□ 1.27
SEMA3B-213ENST00000618865 EFCAB2Q5VUJ9 269 aa22.99■■□□□ 1.27
SEMA3B-213ENST00000618865 MAGI2Q86UL8 1455 aa22.98■■□□□ 1.27
SEMA3B-213ENST00000618865 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
SEMA3B-213ENST00000618865 E9PCH4 1651 aa22.96■■□□□ 1.27
SEMA3B-213ENST00000618865 SENP3-EIF4A1A0A087X0R7 540 aa22.96■■□□□ 1.27
SEMA3B-213ENST00000618865 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
SEMA3B-213ENST00000618865 ANP32EQ9BTT0 268 aa22.9■■□□□ 1.26
SEMA3B-213ENST00000618865 ATP10AO60312 1499 aa22.89■■□□□ 1.25
SEMA3B-213ENST00000618865 GPRASP1Q5JY77 1395 aa22.89■■□□□ 1.25
SEMA3B-213ENST00000618865 PNISRQ8TF01 805 aaKnown RBP22.88■■□□□ 1.25
SEMA3B-213ENST00000618865 SPAG9O60271 1321 aaKnown RBP22.88■■□□□ 1.25
SEMA3B-213ENST00000618865 ZFYVE16Q7Z3T8 1539 aa22.87■■□□□ 1.25
SEMA3B-213ENST00000618865 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
SEMA3B-213ENST00000618865 TMC1Q8TDI8 760 aa22.85■■□□□ 1.25
SEMA3B-213ENST00000618865 LAMC1P11047 1609 aa22.84■■□□□ 1.25
SEMA3B-213ENST00000618865 DISP3Q9P2K9 1392 aa22.84■■□□□ 1.25
SEMA3B-213ENST00000618865 TESK2Q96S53 571 aa22.84■■□□□ 1.25
SEMA3B-213ENST00000618865 WDR7Q9Y4E6 1490 aa22.83■■□□□ 1.25
SEMA3B-213ENST00000618865 ARAP3Q8WWN8 1544 aa22.81■■□□□ 1.24
SEMA3B-213ENST00000618865 EIF2AK4Q9P2K8 1649 aaKnown RBP22.81■■□□□ 1.24
SEMA3B-213ENST00000618865 COL17A1Q9UMD9 1497 aaPredicted RBP22.81■■□□□ 1.24
SEMA3B-213ENST00000618865 RBM19Q9Y4C8 960 aaKnown RBP22.81■■□□□ 1.24
SEMA3B-213ENST00000618865 MYBBP1AQ9BQG0 1328 aaKnown RBP22.81■■□□□ 1.24
SEMA3B-213ENST00000618865 ANO8Q9HCE9 1232 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-213ENST00000618865 RTEL1-TNFRSF6BF6WH68 1400 aa22.8■■□□□ 1.24
SEMA3B-213ENST00000618865 SMG6Q86US8 1419 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-213ENST00000618865 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
SEMA3B-213ENST00000618865 FANCAO15360 1455 aa22.79■■□□□ 1.24
SEMA3B-213ENST00000618865 RNF17Q9BXT8 1623 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-213ENST00000618865 PER1O15534 1290 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-213ENST00000618865 RALBP1Q15311 655 aa22.78■■□□□ 1.24
SEMA3B-213ENST00000618865 LRPPRCP42704 1394 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-213ENST00000618865 DEPDC5O75140 1603 aa22.77■■□□□ 1.24
SEMA3B-213ENST00000618865 PPP4R2Q9NY27 417 aa22.77■■□□□ 1.24
SEMA3B-213ENST00000618865 BRD4O60885 1362 aaPredicted RBP22.76■■□□□ 1.23
SEMA3B-213ENST00000618865 SPHKAPQ2M3C7 1700 aa22.76■■□□□ 1.23
SEMA3B-213ENST00000618865 INO80Q9ULG1 1556 aaPredicted RBP22.76■■□□□ 1.23
SEMA3B-213ENST00000618865 ATP7AQ04656 1500 aa22.76■■□□□ 1.23
SEMA3B-213ENST00000618865 CLTCL1P53675 1640 aa22.75■■□□□ 1.23
SEMA3B-213ENST00000618865 MADDQ8WXG6 1647 aa22.75■■□□□ 1.23
SEMA3B-213ENST00000618865 ERICH6BQ5W0A0 696 aa22.75■■□□□ 1.23
SEMA3B-213ENST00000618865 TRPM2O94759 1503 aa22.75■■□□□ 1.23
SEMA3B-213ENST00000618865 NUDCQ9Y266 331 aa22.75■■□□□ 1.23
SEMA3B-213ENST00000618865 PARD3Q8TEW0 1356 aa22.74■■□□□ 1.23
SEMA3B-213ENST00000618865 CEP152O94986 1710 aa22.74■■□□□ 1.23
SEMA3B-213ENST00000618865 B4GALNT3Q6L9W6 998 aa22.74■■□□□ 1.23
SEMA3B-213ENST00000618865 KTN1Q86UP2 1357 aaKnown RBP22.74■■□□□ 1.23
SEMA3B-213ENST00000618865 SCAPERQ9BY12 1400 aa22.72■■□□□ 1.23
SEMA3B-213ENST00000618865 ADGRL1O94910 1474 aa22.71■■□□□ 1.23
SEMA3B-213ENST00000618865 PTPRTO14522 1441 aa22.71■■□□□ 1.23
SEMA3B-213ENST00000618865 TET3O43151 1660 aa22.71■■□□□ 1.23
SEMA3B-213ENST00000618865 ASXL2Q76L83 1435 aa22.71■■□□□ 1.23
SEMA3B-213ENST00000618865 PANK3Q9H999 370 aa22.71■■□□□ 1.23
SEMA3B-213ENST00000618865 CC2D1BQ5T0F9 858 aaKnown RBP22.7■■□□□ 1.22
SEMA3B-213ENST00000618865 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.22
SEMA3B-213ENST00000618865 KIF3BO15066 747 aa22.7■■□□□ 1.22
SEMA3B-213ENST00000618865 VWDEQ8N2E2 1590 aa22.68■■□□□ 1.22
SEMA3B-213ENST00000618865 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
SEMA3B-213ENST00000618865 TMF1P82094 1093 aa22.68■■□□□ 1.22
SEMA3B-213ENST00000618865 NLRP13Q86W25 1043 aa22.68■■□□□ 1.22
SEMA3B-213ENST00000618865 MROH1Q8NDA8 1641 aa22.67■■□□□ 1.22
SEMA3B-213ENST00000618865 UGGT1Q9NYU2 1555 aa22.65■■□□□ 1.22
SEMA3B-213ENST00000618865 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
SEMA3B-213ENST00000618865 SALL2Q9Y467 1007 aaPredicted RBP22.64■■□□□ 1.22
SEMA3B-213ENST00000618865 KIDINS220Q9ULH0 1771 aa22.63■■□□□ 1.21
SEMA3B-213ENST00000618865 KANK1Q14678 1352 aa22.62■■□□□ 1.21
SEMA3B-213ENST00000618865 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
SEMA3B-213ENST00000618865 SCAF11Q99590 1463 aaKnown RBP22.57■■□□□ 1.2
SEMA3B-213ENST00000618865 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
SEMA3B-213ENST00000618865 EFCAB6Q5THR3 1501 aa22.54■■□□□ 1.2
SEMA3B-213ENST00000618865 MROH2AA6NES4 1674 aa22.54■■□□□ 1.2
SEMA3B-213ENST00000618865 UBE2Q2Q8WVN8 375 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms