RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 RDXP35241 583 aaKnown RBP17.87■□□□□ 0.45
PTPN9-206ENST00000618819 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
PTPN9-206ENST00000618819 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
PTPN9-206ENST00000618819 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
PTPN9-206ENST00000618819 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
PTPN9-206ENST00000618819 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
PTPN9-206ENST00000618819 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
PTPN9-206ENST00000618819 DHX37Q8IY37 1157 aaKnown RBP17.85■□□□□ 0.45
PTPN9-206ENST00000618819 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
PTPN9-206ENST00000618819 MNS1Q8NEH6 495 aa17.84■□□□□ 0.45
PTPN9-206ENST00000618819 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
PTPN9-206ENST00000618819 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
PTPN9-206ENST00000618819 PDE4AP27815 886 aa17.84■□□□□ 0.45
PTPN9-206ENST00000618819 SKIDA1Q1XH10 827 aa17.84■□□□□ 0.45
PTPN9-206ENST00000618819 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.44
PTPN9-206ENST00000618819 IPO7O95373 1038 aaKnown RBP17.83■□□□□ 0.44
PTPN9-206ENST00000618819 ARGLU1Q9NWB6 273 aaPredicted RBP17.83■□□□□ 0.44
PTPN9-206ENST00000618819 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
PTPN9-206ENST00000618819 KIF3AQ9Y496 699 aa17.82■□□□□ 0.44
PTPN9-206ENST00000618819 HSP90B2PQ58FF3 399 aa17.82■□□□□ 0.44
PTPN9-206ENST00000618819 HMMRO75330 724 aa17.82■□□□□ 0.44
PTPN9-206ENST00000618819 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
PTPN9-206ENST00000618819 NAP1L1P55209 391 aaKnown RBP17.81■□□□□ 0.44
PTPN9-206ENST00000618819 PLEKHD1A6NEE1 506 aa17.8■□□□□ 0.44
PTPN9-206ENST00000618819 CWC15Q9P013 229 aaKnown RBP17.8■□□□□ 0.44
PTPN9-206ENST00000618819 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
PTPN9-206ENST00000618819 STK31Q9BXU1 1019 aa17.8■□□□□ 0.44
PTPN9-206ENST00000618819 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
PTPN9-206ENST00000618819 CHMP7Q8WUX9 453 aaPredicted RBP17.79■□□□□ 0.44
PTPN9-206ENST00000618819 FAM161AQ3B820 660 aa17.79■□□□□ 0.44
PTPN9-206ENST00000618819 ACBD3Q9H3P7 528 aa17.78■□□□□ 0.44
PTPN9-206ENST00000618819 ATP6V1DQ9Y5K8 247 aa17.78■□□□□ 0.44
PTPN9-206ENST00000618819 CDR1P51861 262 aa17.78■□□□□ 0.44
PTPN9-206ENST00000618819 CCDC66A2RUB6 948 aa17.77■□□□□ 0.43
PTPN9-206ENST00000618819 STK26Q9P289 416 aa17.76■□□□□ 0.43
PTPN9-206ENST00000618819 CENPJQ9HC77 1338 aaPredicted RBP17.76■□□□□ 0.43
PTPN9-206ENST00000618819 BICD2Q8TD16 824 aa17.76■□□□□ 0.43
PTPN9-206ENST00000618819 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
PTPN9-206ENST00000618819 TSPYL1Q9H0U9 437 aa17.75■□□□□ 0.43
PTPN9-206ENST00000618819 PLIN1O60240 522 aa17.74■□□□□ 0.43
PTPN9-206ENST00000618819 TTLL5Q6EMB2 1281 aa17.74■□□□□ 0.43
PTPN9-206ENST00000618819 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
PTPN9-206ENST00000618819 AKAP17AQ02040 695 aaKnown RBP17.74■□□□□ 0.43
PTPN9-206ENST00000618819 FOSBP53539 338 aa17.73■□□□□ 0.43
PTPN9-206ENST00000618819 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
PTPN9-206ENST00000618819 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
PTPN9-206ENST00000618819 ANKRD20A12PQ8NF67 263 aa17.72■□□□□ 0.43
PTPN9-206ENST00000618819 G3V3G9 751 aa17.71■□□□□ 0.43
PTPN9-206ENST00000618819 DCAF8Q5TAQ9 597 aa17.71■□□□□ 0.43
PTPN9-206ENST00000618819 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
PTPN9-206ENST00000618819 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.42
PTPN9-206ENST00000618819 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
PTPN9-206ENST00000618819 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
PTPN9-206ENST00000618819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.7■□□□□ 0.425e-6■■■■■ 50.2
PTPN9-206ENST00000618819 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
PTPN9-206ENST00000618819 HDGFL2Q7Z4V5 671 aaPredicted RBP17.7■□□□□ 0.42
PTPN9-206ENST00000618819 DIAPH3Q9NSV4 1193 aa17.7■□□□□ 0.42
PTPN9-206ENST00000618819 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
PTPN9-206ENST00000618819 PDILTQ8N807 584 aa17.69■□□□□ 0.42
PTPN9-206ENST00000618819 RAD21O60216 631 aa17.69■□□□□ 0.42
PTPN9-206ENST00000618819 LEKR1Q6ZMV7 388 aa17.69■□□□□ 0.42
PTPN9-206ENST00000618819 CENPQQ7L2Z9 268 aaPredicted RBP17.69■□□□□ 0.42
PTPN9-206ENST00000618819 FOXD1Q16676 465 aa17.68■□□□□ 0.42
PTPN9-206ENST00000618819 RALBP1Q15311 655 aa17.68■□□□□ 0.42
PTPN9-206ENST00000618819 BRPF3Q9ULD4 1205 aa17.68■□□□□ 0.42
PTPN9-206ENST00000618819 EXOC6Q8TAG9 804 aa17.67■□□□□ 0.42
PTPN9-206ENST00000618819 PRKCSHP14314 528 aaPredicted RBP17.67■□□□□ 0.42
PTPN9-206ENST00000618819 RNF214Q8ND24 703 aa17.67■□□□□ 0.42
PTPN9-206ENST00000618819 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
PTPN9-206ENST00000618819 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
PTPN9-206ENST00000618819 CT47A1Q5JQC4 288 aaPredicted RBP17.67■□□□□ 0.42
PTPN9-206ENST00000618819 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
PTPN9-206ENST00000618819 CCDC39Q9UFE4 941 aa17.66■□□□□ 0.42
PTPN9-206ENST00000618819 TRIM29Q14134 588 aa17.66■□□□□ 0.42
PTPN9-206ENST00000618819 VPS37CA5D8V6 355 aaPredicted RBP17.66■□□□□ 0.42
PTPN9-206ENST00000618819 MTERF4Q7Z6M4 381 aaKnown RBP17.66■□□□□ 0.42
PTPN9-206ENST00000618819 RRP7AQ9Y3A4 280 aaKnown RBP17.66■□□□□ 0.42
PTPN9-206ENST00000618819 NASPP49321 788 aaPredicted RBP17.66■□□□□ 0.42
PTPN9-206ENST00000618819 HSP90AB2PQ58FF8 381 aa17.66■□□□□ 0.42
PTPN9-206ENST00000618819 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
PTPN9-206ENST00000618819 TCEAL9Q9UHQ7 104 aa17.65■□□□□ 0.42
PTPN9-206ENST00000618819 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
PTPN9-206ENST00000618819 CHMP5Q9NZZ3 219 aa17.65■□□□□ 0.42
PTPN9-206ENST00000618819 GOLGA3Q08378 1498 aa17.65■□□□□ 0.42
PTPN9-206ENST00000618819 SYNE3Q6ZMZ3 975 aa17.64■□□□□ 0.41
PTPN9-206ENST00000618819 KRI1Q8N9T8 703 aaKnown RBP17.64■□□□□ 0.41
PTPN9-206ENST00000618819 CCDC47Q96A33 483 aaKnown RBP17.64■□□□□ 0.41
PTPN9-206ENST00000618819 FANCIQ9NVI1 1328 aa17.63■□□□□ 0.41
PTPN9-206ENST00000618819 ODF2Q5BJF6 829 aa17.63■□□□□ 0.41
PTPN9-206ENST00000618819 ZFYVE27Q5T4F4 411 aa17.63■□□□□ 0.41
PTPN9-206ENST00000618819 NFKBIBQ15653 356 aa17.62■□□□□ 0.41
PTPN9-206ENST00000618819 HOOK1Q9UJC3 728 aaKnown RBP17.62■□□□□ 0.41
PTPN9-206ENST00000618819 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
PTPN9-206ENST00000618819 ROCK2O75116 1388 aaKnown RBP17.61■□□□□ 0.41
PTPN9-206ENST00000618819 ERCC4Q92889 916 aaPredicted RBP17.61■□□□□ 0.41
PTPN9-206ENST00000618819 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
PTPN9-206ENST00000618819 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
PTPN9-206ENST00000618819 HDAC5Q9UQL6 1122 aa17.59■□□□□ 0.41
PTPN9-206ENST00000618819 ERICH4A6NGS2 130 aa17.59■□□□□ 0.41
PTPN9-206ENST00000618819 CPLX1O14810 134 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms