RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TPM2P07951 284 aa13.86□□□□□ -0.19
CCDC144B-208ENST00000618081 KRI1Q8N9T8 703 aaKnown RBP13.86□□□□□ -0.19
CCDC144B-208ENST00000618081 TPD52L1Q16890 204 aaPredicted RBP13.85□□□□□ -0.19
CCDC144B-208ENST00000618081 AMOTL1Q8IY63 956 aa13.85□□□□□ -0.19
CCDC144B-208ENST00000618081 TRIM34Q9BYJ4 488 aa13.85□□□□□ -0.19
CCDC144B-208ENST00000618081 TOMM22Q9NS69 142 aa13.85□□□□□ -0.19
CCDC144B-208ENST00000618081 SF3A1Q15459 793 aaKnown RBP13.84□□□□□ -0.19
CCDC144B-208ENST00000618081 GZF1Q9H116 711 aaPredicted RBP13.84□□□□□ -0.19
CCDC144B-208ENST00000618081 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
CCDC144B-208ENST00000618081 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
CCDC144B-208ENST00000618081 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
CCDC144B-208ENST00000618081 NOL10Q9BSC4 688 aaKnown RBP13.84□□□□□ -0.19
CCDC144B-208ENST00000618081 HSPA5P11021 654 aaKnown RBP13.83□□□□□ -0.2
CCDC144B-208ENST00000618081 H3BQV1 296 aa13.83□□□□□ -0.2
CCDC144B-208ENST00000618081 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
CCDC144B-208ENST00000618081 PES1O00541 588 aaKnown RBP13.82□□□□□ -0.2
CCDC144B-208ENST00000618081 MFAP1P55081 439 aaKnown RBP13.82□□□□□ -0.2
CCDC144B-208ENST00000618081 EVA1CP58658 441 aa13.82□□□□□ -0.2
CCDC144B-208ENST00000618081 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
CCDC144B-208ENST00000618081 TPM1P09493 284 aa13.81□□□□□ -0.2
CCDC144B-208ENST00000618081 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
CCDC144B-208ENST00000618081 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
CCDC144B-208ENST00000618081 SLKQ9H2G2 1235 aaPredicted RBP13.81□□□□□ -0.2
CCDC144B-208ENST00000618081 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
CCDC144B-208ENST00000618081 CCDC70Q6NSX1 233 aa13.8□□□□□ -0.2
CCDC144B-208ENST00000618081 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
CCDC144B-208ENST00000618081 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
CCDC144B-208ENST00000618081 GOLGA6L3A6NEY3 463 aa13.79□□□□□ -0.2
CCDC144B-208ENST00000618081 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
CCDC144B-208ENST00000618081 ATP6V1DQ9Y5K8 247 aa13.79□□□□□ -0.2
CCDC144B-208ENST00000618081 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 SYNE3Q6ZMZ3 975 aa13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 FAM184AQ8NB25 1140 aa13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 SOGA1O94964 1423 aa13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 KIF3BO15066 747 aa13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC144B-208ENST00000618081 FOXD1Q16676 465 aa13.77□□□□□ -0.2
CCDC144B-208ENST00000618081 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.2
CCDC144B-208ENST00000618081 GOLGA6L19H0YKK7 550 aa13.77□□□□□ -0.21
CCDC144B-208ENST00000618081 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
CCDC144B-208ENST00000618081 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
CCDC144B-208ENST00000618081 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
CCDC144B-208ENST00000618081 VPS37DQ86XT2 251 aa13.74□□□□□ -0.21
CCDC144B-208ENST00000618081 NOL8Q76FK4 1167 aaKnown RBP13.74□□□□□ -0.21
CCDC144B-208ENST00000618081 HOOK1Q9UJC3 728 aaKnown RBP13.74□□□□□ -0.21
CCDC144B-208ENST00000618081 MSH5O43196 834 aa13.74□□□□□ -0.21
CCDC144B-208ENST00000618081 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
CCDC144B-208ENST00000618081 KIF15Q9NS87 1388 aa13.74□□□□□ -0.21
CCDC144B-208ENST00000618081 MEX3CQ5U5Q3 659 aaKnown RBP13.73□□□□□ -0.21
CCDC144B-208ENST00000618081 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
CCDC144B-208ENST00000618081 TRIM29Q14134 588 aa13.73□□□□□ -0.21
CCDC144B-208ENST00000618081 WIZO95785 1651 aa13.73□□□□□ -0.21
CCDC144B-208ENST00000618081 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 ANKRD20A12PQ8NF67 263 aa13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 ARID3AQ99856 593 aa13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 CCDC47Q96A33 483 aaKnown RBP13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 PDE3BQ13370 1112 aa13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 NLRP13Q86W25 1043 aa13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 RILPL2Q969X0 211 aa13.72□□□□□ -0.21
CCDC144B-208ENST00000618081 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
CCDC144B-208ENST00000618081 GPS2Q13227 327 aa13.71□□□□□ -0.21
CCDC144B-208ENST00000618081 COG3Q96JB2 828 aa13.71□□□□□ -0.21
CCDC144B-208ENST00000618081 CCDC146Q8IYE0 955 aa13.71□□□□□ -0.21
CCDC144B-208ENST00000618081 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
CCDC144B-208ENST00000618081 CWC22Q9HCG8 908 aaKnown RBP13.71□□□□□ -0.21
CCDC144B-208ENST00000618081 RUFY2Q8WXA3 655 aa13.71□□□□□ -0.21
CCDC144B-208ENST00000618081 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 RAD21O60216 631 aa13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 TEFQ10587 303 aa13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 RBM19Q9Y4C8 960 aaKnown RBP13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 BECN2A8MW95 431 aa13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 EVC2Q86UK5 1308 aa13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
CCDC144B-208ENST00000618081 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
CCDC144B-208ENST00000618081 MCTP1Q6DN14 999 aa13.68□□□□□ -0.22
CCDC144B-208ENST00000618081 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
CCDC144B-208ENST00000618081 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
CCDC144B-208ENST00000618081 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC144B-208ENST00000618081 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
CCDC144B-208ENST00000618081 PCMTD1Q96MG8 357 aaPredicted RBP13.67□□□□□ -0.22
CCDC144B-208ENST00000618081 NUTM2DQ5VT03 806 aaPredicted RBP13.67□□□□□ -0.22
CCDC144B-208ENST00000618081 TRDNQ13061 729 aa13.67□□□□□ -0.22
CCDC144B-208ENST00000618081 ERICH2A1L162 156 aa13.67□□□□□ -0.22
CCDC144B-208ENST00000618081 CCAR2Q8N163 923 aaKnown RBP13.66□□□□□ -0.22
CCDC144B-208ENST00000618081 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
CCDC144B-208ENST00000618081 APPP05067 770 aa13.66□□□□□ -0.22
CCDC144B-208ENST00000618081 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
CCDC144B-208ENST00000618081 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
CCDC144B-208ENST00000618081 SKOR2Q2VWA4 1001 aaPredicted RBP13.66□□□□□ -0.22
CCDC144B-208ENST00000618081 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
CCDC144B-208ENST00000618081 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
CCDC144B-208ENST00000618081 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
CCDC144B-208ENST00000618081 REC8O95072 547 aa13.65□□□□□ -0.22
CCDC144B-208ENST00000618081 IPO9Q96P70 1041 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms