RNA–Protein interactions for RNA: ENST00000617962.1

GADD45A-205, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-205ENST00000617962 FBXO31Q5XUX0 539 aaPredicted RBP39.13■■■■□ 3.85
GADD45A-205ENST00000617962 KDM5DQ9BY66 1539 aa39.13■■■■□ 3.85
GADD45A-205ENST00000617962 TNRQ92752 1358 aa39.11■■■■□ 3.85
GADD45A-205ENST00000617962 ILDR2Q71H61 639 aa39.11■■■■□ 3.85
GADD45A-205ENST00000617962 ARHGEF5Q12774 1597 aa39.09■■■■□ 3.85
GADD45A-205ENST00000617962 PZPP20742 1482 aa39.09■■■■□ 3.85
GADD45A-205ENST00000617962 WASHC2CQ9Y4E1 1318 aa39.09■■■■□ 3.85
GADD45A-205ENST00000617962 FAM135AQ9P2D6 1515 aa39.09■■■■□ 3.85
GADD45A-205ENST00000617962 UBAP1LF5GYI3 381 aa39.06■■■■□ 3.84
GADD45A-205ENST00000617962 SPATA31D1Q6ZQQ2 1576 aa39.06■■■■□ 3.84
GADD45A-205ENST00000617962 TSPY4P0CV99 314 aa39.05■■■■□ 3.84
GADD45A-205ENST00000617962 TSPY10P0CW01 314 aa39.05■■■■□ 3.84
GADD45A-205ENST00000617962 LRRC9Q6ZRR7 1453 aa39.02■■■■□ 3.84
GADD45A-205ENST00000617962 VPS8Q8N3P4 1428 aa39.01■■■■□ 3.84
GADD45A-205ENST00000617962 POLR1AO95602 1720 aaPredicted RBP39■■■■□ 3.83
GADD45A-205ENST00000617962 NEURL4Q96JN8 1562 aa38.97■■■■□ 3.83
GADD45A-205ENST00000617962 LOC105371045A0A1W2PR82 267 aa38.96■■■■□ 3.83
GADD45A-205ENST00000617962 MIA2Q96PC5 1412 aa38.95■■■■□ 3.83
GADD45A-205ENST00000617962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.92■■■■□ 3.822e-33■■□□□ 13.6
GADD45A-205ENST00000617962 NLRP1Q9C000 1473 aa38.91■■■■□ 3.82
GADD45A-205ENST00000617962 MAST1Q9Y2H9 1570 aa38.9■■■■□ 3.82
GADD45A-205ENST00000617962 SOCS7O14512 581 aa38.89■■■■□ 3.82
GADD45A-205ENST00000617962 ANKLE2Q86XL3 938 aa38.89■■■■□ 3.82
GADD45A-205ENST00000617962 THEMISQ8N1K5 641 aaPredicted RBP38.89■■■■□ 3.82
GADD45A-205ENST00000617962 RNF17Q9BXT8 1623 aaKnown RBP38.89■■■■□ 3.82
GADD45A-205ENST00000617962 KANK4Q5T7N3 995 aaPredicted RBP38.88■■■■□ 3.81
GADD45A-205ENST00000617962 UGGT1Q9NYU2 1555 aa38.87■■■■□ 3.81
GADD45A-205ENST00000617962 SHANK2Q9UPX8 1470 aa38.85■■■■□ 3.81
GADD45A-205ENST00000617962 ABCC3O15438 1527 aa38.84■■■■□ 3.81
GADD45A-205ENST00000617962 CPS1P31327 1500 aa38.84■■■■□ 3.81
GADD45A-205ENST00000617962 MAP3K1Q13233 1512 aa38.83■■■■□ 3.81
GADD45A-205ENST00000617962 MYOM3Q5VTT5 1437 aa38.81■■■■□ 3.8
GADD45A-205ENST00000617962 ZC3H13Q5T200 1668 aaKnown RBP38.81■■■■□ 3.8
GADD45A-205ENST00000617962 EIF2AK4Q9P2K8 1649 aaKnown RBP38.81■■■■□ 3.8
GADD45A-205ENST00000617962 NPHP4O75161 1426 aaPredicted RBP38.78■■■■□ 3.8
GADD45A-205ENST00000617962 DEPDC5O75140 1603 aa38.78■■■■□ 3.8
GADD45A-205ENST00000617962 MED14O60244 1454 aa38.76■■■■□ 3.8
GADD45A-205ENST00000617962 VWDEQ8N2E2 1590 aa38.76■■■■□ 3.8
GADD45A-205ENST00000617962 SCAF1Q9H7N4 1312 aaKnown RBP38.76■■■■□ 3.8
GADD45A-205ENST00000617962 MROH1Q8NDA8 1641 aa38.75■■■■□ 3.79
GADD45A-205ENST00000617962 PIP4K2BP78356 416 aa38.73■■■■□ 3.79
GADD45A-205ENST00000617962 ERVK-7P63135 1459 aa38.73■■■■□ 3.79
GADD45A-205ENST00000617962 TOM1O60784 492 aa38.72■■■■□ 3.79
GADD45A-205ENST00000617962 CEP152O94986 1710 aa38.69■■■■□ 3.78
GADD45A-205ENST00000617962 DUOX2Q9NRD8 1548 aa38.69■■■■□ 3.78
GADD45A-205ENST00000617962 IQGAP1P46940 1657 aa38.69■■■■□ 3.78
GADD45A-205ENST00000617962 HSPA1LP34931 641 aa38.67■■■■□ 3.78
GADD45A-205ENST00000617962 CFAP65Q6ZU64 1925 aaKnown RBP38.63■■■■□ 3.77
GADD45A-205ENST00000617962 KIF15Q9NS87 1388 aa38.61■■■■□ 3.77
GADD45A-205ENST00000617962 UBR1Q8IWV7 1749 aa38.58■■■■□ 3.77
GADD45A-205ENST00000617962 ABCC5O15440 1437 aa38.58■■■■□ 3.77
GADD45A-205ENST00000617962 CROCC2H7BZ55 1655 aa38.58■■■■□ 3.77
GADD45A-205ENST00000617962 RRP7BPQ9NSQ0 103 aa38.57■■■■□ 3.76
GADD45A-205ENST00000617962 PTPN23Q9H3S7 1636 aa38.56■■■■□ 3.76
GADD45A-205ENST00000617962 STRCP1A6NGW2 1772 aa38.55■■■■□ 3.76
GADD45A-205ENST00000617962 PRDM15P57071 1507 aaPredicted RBP38.55■■■■□ 3.76
GADD45A-205ENST00000617962 ERBINQ96RT1 1412 aa38.55■■■■□ 3.76
GADD45A-205ENST00000617962 ALKQ9UM73 1620 aa38.53■■■■□ 3.76
GADD45A-205ENST00000617962 APLP2Q06481 763 aa38.53■■■■□ 3.76
GADD45A-205ENST00000617962 ARHGAP31Q2M1Z3 1444 aa38.51■■■■□ 3.76
GADD45A-205ENST00000617962 LRRC7Q96NW7 1537 aa38.5■■■■□ 3.75
GADD45A-205ENST00000617962 MED1Q15648 1581 aaPredicted RBP38.49■■■■□ 3.75
GADD45A-205ENST00000617962 SCAF11Q99590 1463 aaKnown RBP38.49■■■■□ 3.75
GADD45A-205ENST00000617962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.49■■■■□ 3.752e-13■■□□□ 13
GADD45A-205ENST00000617962 DAPK1P53355 1430 aa38.48■■■■□ 3.75
GADD45A-205ENST00000617962 SYNMO15061 1565 aa38.46■■■■□ 3.75
GADD45A-205ENST00000617962 LTKP29376 864 aa38.45■■■■□ 3.75
GADD45A-205ENST00000617962 SLIT1O75093 1534 aa38.44■■■■□ 3.74
GADD45A-205ENST00000617962 ARHGAP23Q9P227 1491 aa38.44■■■■□ 3.74
GADD45A-205ENST00000617962 TXNDC2Q86VQ3 553 aa38.44■■■■□ 3.74
GADD45A-205ENST00000617962 FGD6Q6ZV73 1430 aa38.44■■■■□ 3.74
GADD45A-205ENST00000617962 KANK1Q14678 1352 aa38.4■■■■□ 3.74
GADD45A-205ENST00000617962 CHIC2Q9UKJ5 165 aa38.38■■■■□ 3.73
GADD45A-205ENST00000617962 PIK3C2BO00750 1634 aa38.38■■■■□ 3.73
GADD45A-205ENST00000617962 EID1Q9Y6B2 187 aa38.36■■■■□ 3.73
GADD45A-205ENST00000617962 ANKRD30AQ9BXX3 1397 aa38.35■■■■□ 3.73
GADD45A-205ENST00000617962 SENP3Q9H4L4 574 aaPredicted RBP38.35■■■■□ 3.73
GADD45A-205ENST00000617962 STAG3Q9UJ98 1225 aa38.32■■■■□ 3.72
GADD45A-205ENST00000617962 TMEM2Q9UHN6 1383 aa38.31■■■■□ 3.72
GADD45A-205ENST00000617962 LMTK2Q8IWU2 1503 aa38.3■■■■□ 3.72
GADD45A-205ENST00000617962 IDI1Q13907 227 aa38.26■■■■□ 3.72
GADD45A-205ENST00000617962 EFCAB6Q5THR3 1501 aa38.25■■■■□ 3.71
GADD45A-205ENST00000617962 KDM5AP29375 1690 aaKnown RBP38.23■■■■□ 3.71
GADD45A-205ENST00000617962 PHF23Q9BUL5 403 aaPredicted RBP38.23■■■■□ 3.71
GADD45A-205ENST00000617962 XIRP1Q702N8 1843 aaKnown RBP38.23■■■■□ 3.71
GADD45A-205ENST00000617962 ADGRL2O95490 1459 aa38.17■■■■□ 3.7
GADD45A-205ENST00000617962 NOS1P29475 1434 aa38.17■■■■□ 3.7
GADD45A-205ENST00000617962 FAM50AQ14320 339 aaKnown RBP38.14■■■■□ 3.7
GADD45A-205ENST00000617962 ADGRB3O60242 1522 aa38.12■■■■□ 3.69
GADD45A-205ENST00000617962 SLC26A8Q96RN1 970 aa38.12■■■■□ 3.69
GADD45A-205ENST00000617962 TET3O43151 1660 aa38.11■■■■□ 3.69
GADD45A-205ENST00000617962 TMEM94Q12767 1356 aa38.09■■■■□ 3.69
GADD45A-205ENST00000617962 KCNA6P17658 529 aa38.09■■■■□ 3.69
GADD45A-205ENST00000617962 SLC52A1Q9NWF4 448 aa38.08■■■■□ 3.69
GADD45A-205ENST00000617962 ANKRD50Q9ULJ7 1429 aa38.07■■■■□ 3.69
GADD45A-205ENST00000617962 PROSER2Q86WR7 435 aaPredicted RBP38.03■■■■□ 3.68
GADD45A-205ENST00000617962 RPRD2Q5VT52 1461 aaKnown RBP38.03■■■■□ 3.68
GADD45A-205ENST00000617962 FAM135BQ49AJ0 1406 aa38.02■■■■□ 3.68
GADD45A-205ENST00000617962 RBM33Q96EV2 1170 aaKnown RBP38.01■■■■□ 3.68
GADD45A-205ENST00000617962 BCANQ96GW7 911 aa38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms