RNA–Protein interactions for RNA: ENST00000617548.1

ACACA-239, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,063 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-239ENST00000617548 RRP7BPQ9NSQ0 103 aa35.6■■■■□ 3.29
ACACA-239ENST00000617548 DUOX2Q9NRD8 1548 aa35.6■■■■□ 3.29
ACACA-239ENST00000617548 KDM5DQ9BY66 1539 aa35.59■■■■□ 3.29
ACACA-239ENST00000617548 KIF15Q9NS87 1388 aa35.59■■■■□ 3.29
ACACA-239ENST00000617548 PPARGC1BQ86YN6 1023 aaKnown RBP35.58■■■■□ 3.29
ACACA-239ENST00000617548 CHIC2Q9UKJ5 165 aa35.58■■■■□ 3.29
ACACA-239ENST00000617548 EIF2AK4Q9P2K8 1649 aaKnown RBP35.57■■■■□ 3.29
ACACA-239ENST00000617548 FAM135AQ9P2D6 1515 aa35.57■■■■□ 3.28
ACACA-239ENST00000617548 PTPRKQ15262 1439 aa35.57■■■■□ 3.28
ACACA-239ENST00000617548 RNF17Q9BXT8 1623 aaKnown RBP35.54■■■■□ 3.28
ACACA-239ENST00000617548 ANKRD30AQ9BXX3 1397 aa35.52■■■■□ 3.28
ACACA-239ENST00000617548 ERBINQ96RT1 1412 aa35.48■■■■□ 3.27
ACACA-239ENST00000617548 PZPP20742 1482 aa35.45■■■■□ 3.27
ACACA-239ENST00000617548 MYO3AQ8NEV4 1616 aa35.45■■■■□ 3.27
ACACA-239ENST00000617548 FBXO31Q5XUX0 539 aaPredicted RBP35.44■■■■□ 3.26
ACACA-239ENST00000617548 ZC3H13Q5T200 1668 aaKnown RBP35.43■■■■□ 3.26
ACACA-239ENST00000617548 NCOA1Q15788 1441 aa35.42■■■■□ 3.26
ACACA-239ENST00000617548 ABCC3O15438 1527 aa35.42■■■■□ 3.26
ACACA-239ENST00000617548 MROH1Q8NDA8 1641 aa35.41■■■■□ 3.26
ACACA-239ENST00000617548 STRCQ7RTU9 1775 aa35.41■■■■□ 3.26
ACACA-239ENST00000617548 DMRT2Q9Y5R5 561 aa35.4■■■■□ 3.26
ACACA-239ENST00000617548 TNRQ92752 1358 aa35.38■■■■□ 3.26
ACACA-239ENST00000617548 ADGRL2O95490 1459 aa35.38■■■■□ 3.25
ACACA-239ENST00000617548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.38■■■■□ 3.258e-12■■□□□ 12.6
ACACA-239ENST00000617548 CEP170BQ9Y4F5 1589 aaPredicted RBP35.38■■■■□ 3.25
ACACA-239ENST00000617548 ZNF142P52746 1687 aaPredicted RBP35.37■■■■□ 3.25
ACACA-239ENST00000617548 CAMSAP1Q5T5Y3 1602 aa35.35■■■■□ 3.25
ACACA-239ENST00000617548 CEP152O94986 1710 aa35.35■■■■□ 3.25
ACACA-239ENST00000617548 PRDM15P57071 1507 aaPredicted RBP35.33■■■■□ 3.25
ACACA-239ENST00000617548 A2ML1A8K2U0 1454 aa35.31■■■■□ 3.24
ACACA-239ENST00000617548 KANK1Q14678 1352 aa35.31■■■■□ 3.24
ACACA-239ENST00000617548 DEPDC5O75140 1603 aa35.29■■■■□ 3.24
ACACA-239ENST00000617548 ITGAEP38570 1179 aa35.29■■■■□ 3.24
ACACA-239ENST00000617548 ILDR1Q86SU0 546 aaPredicted RBP35.25■■■■□ 3.23
ACACA-239ENST00000617548 ANKRD50Q9ULJ7 1429 aa35.24■■■■□ 3.23
ACACA-239ENST00000617548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.24■■■■□ 3.23
ACACA-239ENST00000617548 PTPRTO14522 1441 aa35.23■■■■□ 3.23
ACACA-239ENST00000617548 NCKAP5LQ9HCH0 1330 aa35.23■■■■□ 3.23
ACACA-239ENST00000617548 NLRP1Q9C000 1473 aa35.22■■■■□ 3.23
ACACA-239ENST00000617548 PLA2R1Q13018 1463 aa35.22■■■■□ 3.23
ACACA-239ENST00000617548 CFAP65Q6ZU64 1925 aaKnown RBP35.21■■■■□ 3.23
ACACA-239ENST00000617548 ERVK-7P63135 1459 aa35.21■■■■□ 3.23
ACACA-239ENST00000617548 SPATA31D1Q6ZQQ2 1576 aa35.21■■■■□ 3.23
ACACA-239ENST00000617548 ROCK1Q13464 1354 aa35.19■■■■□ 3.22
ACACA-239ENST00000617548 PKD2Q13563 968 aa35.18■■■■□ 3.22
ACACA-239ENST00000617548 ARHGAP31Q2M1Z3 1444 aa35.17■■■■□ 3.22
ACACA-239ENST00000617548 THEMISQ8N1K5 641 aaPredicted RBP35.14■■■■□ 3.22
ACACA-239ENST00000617548 VWDEQ8N2E2 1590 aa35.13■■■■□ 3.21
ACACA-239ENST00000617548 UGGT1Q9NYU2 1555 aa35.13■■■■□ 3.21
ACACA-239ENST00000617548 LMTK2Q8IWU2 1503 aa35.12■■■■□ 3.21
ACACA-239ENST00000617548 RRBP1Q9P2E9 1410 aaKnown RBP35.12■■■■□ 3.21
ACACA-239ENST00000617548 CERKQ8TCT0 537 aa35.1■■■■□ 3.21
ACACA-239ENST00000617548 FBXO41Q8TF61 875 aa35.08■■■■□ 3.21
ACACA-239ENST00000617548 ANKLE2Q86XL3 938 aa35.04■■■■□ 3.2
ACACA-239ENST00000617548 EFCAB6Q5THR3 1501 aa35.03■■■■□ 3.2
ACACA-239ENST00000617548 POLR1AO95602 1720 aaPredicted RBP35.03■■■■□ 3.2
ACACA-239ENST00000617548 UNC13BO14795 1591 aa35.01■■■■□ 3.2
ACACA-239ENST00000617548 UBR1Q8IWV7 1749 aa34.96■■■■□ 3.19
ACACA-239ENST00000617548 TET3O43151 1660 aa34.95■■■■□ 3.19
ACACA-239ENST00000617548 STAG3Q9UJ98 1225 aa34.95■■■■□ 3.19
ACACA-239ENST00000617548 NEURL4Q96JN8 1562 aa34.94■■■■□ 3.18
ACACA-239ENST00000617548 RPRD2Q5VT52 1461 aaKnown RBP34.92■■■■□ 3.18
ACACA-239ENST00000617548 ZNF335Q9H4Z2 1342 aaPredicted RBP34.92■■■■□ 3.18
ACACA-239ENST00000617548 LTBP4Q8N2S1 1624 aa34.92■■■■□ 3.18
ACACA-239ENST00000617548 NUP155O75694 1391 aa34.91■■■■□ 3.18
ACACA-239ENST00000617548 PIK3C2BO00750 1634 aa34.91■■■■□ 3.18
ACACA-239ENST00000617548 NOS1P29475 1434 aa34.9■■■■□ 3.18
ACACA-239ENST00000617548 GCC2Q8IWJ2 1684 aa34.9■■■■□ 3.18
ACACA-239ENST00000617548 SYNMO15061 1565 aa34.9■■■■□ 3.18
ACACA-239ENST00000617548 IDI1Q13907 227 aa34.89■■■■□ 3.18
ACACA-239ENST00000617548 NPHP4O75161 1426 aaPredicted RBP34.88■■■■□ 3.17
ACACA-239ENST00000617548 IQGAP3Q86VI3 1631 aa34.88■■■■□ 3.17
ACACA-239ENST00000617548 MED14O60244 1454 aa34.85■■■■□ 3.17
ACACA-239ENST00000617548 SLC52A1Q9NWF4 448 aa34.85■■■■□ 3.17
ACACA-239ENST00000617548 TXNDC2Q86VQ3 553 aa34.82■■■■□ 3.16
ACACA-239ENST00000617548 EID1Q9Y6B2 187 aa34.82■■■■□ 3.16
ACACA-239ENST00000617548 IQGAP1P46940 1657 aa34.82■■■■□ 3.16
ACACA-239ENST00000617548 NAIPQ13075 1403 aa34.81■■■■□ 3.16
ACACA-239ENST00000617548 E9PCH4 1651 aa34.81■■■■□ 3.16
ACACA-239ENST00000617548 SLIT1O75093 1534 aa34.81■■■■□ 3.16
ACACA-239ENST00000617548 SCAF11Q99590 1463 aaKnown RBP34.8■■■■□ 3.16
ACACA-239ENST00000617548 KDM5AP29375 1690 aaKnown RBP34.79■■■■□ 3.16
ACACA-239ENST00000617548 ARHGAP23Q9P227 1491 aa34.79■■■■□ 3.16
ACACA-239ENST00000617548 TMEM2Q9UHN6 1383 aa34.77■■■■□ 3.16
ACACA-239ENST00000617548 LTKP29376 864 aa34.77■■■■□ 3.16
ACACA-239ENST00000617548 ADGRB3O60242 1522 aa34.76■■■■□ 3.15
ACACA-239ENST00000617548 HFM1A2PYH4 1435 aa34.73■■■■□ 3.15
ACACA-239ENST00000617548 IQSEC2Q5JU85 1478 aa34.73■■■■□ 3.15
ACACA-239ENST00000617548 CHGAP10645 457 aaKnown RBP34.68■■■■□ 3.14
ACACA-239ENST00000617548 TRIM52Q96A61 297 aa34.67■■■■□ 3.14
ACACA-239ENST00000617548 CPS1P31327 1500 aa34.66■■■■□ 3.14
ACACA-239ENST00000617548 MYO5BQ9ULV0 1848 aa34.62■■■■□ 3.13
ACACA-239ENST00000617548 TMEM131LA2VDJ0 1609 aa34.61■■■■□ 3.13
ACACA-239ENST00000617548 HDGFP51858 240 aaKnown RBP34.59■■■■□ 3.13
ACACA-239ENST00000617548 BCANQ96GW7 911 aa34.58■■■■□ 3.13
ACACA-239ENST00000617548 SPHKAPQ2M3C7 1700 aa34.58■■■■□ 3.13
ACACA-239ENST00000617548 UBAP1LF5GYI3 381 aa34.56■■■■□ 3.12
ACACA-239ENST00000617548 PPP1R15AO75807 674 aaPredicted RBP34.56■■■■□ 3.12
ACACA-239ENST00000617548 RIMS2Q9UQ26 1411 aa34.55■■■■□ 3.12
ACACA-239ENST00000617548 STRCP1A6NGW2 1772 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms