RNA–Protein interactions for RNA: ENST00000617484.4

PPARGC1A-218, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-218ENST00000617484 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
PPARGC1A-218ENST00000617484 PTPRTO14522 1441 aa14.07□□□□□ -0.16
PPARGC1A-218ENST00000617484 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
PPARGC1A-218ENST00000617484 NCKAP5LQ9HCH0 1330 aa14.06□□□□□ -0.16
PPARGC1A-218ENST00000617484 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
PPARGC1A-218ENST00000617484 CAMSAP1Q5T5Y3 1602 aa14.05□□□□□ -0.16
PPARGC1A-218ENST00000617484 PTPN23Q9H3S7 1636 aa14.05□□□□□ -0.16
PPARGC1A-218ENST00000617484 PZPP20742 1482 aa14.05□□□□□ -0.16
PPARGC1A-218ENST00000617484 KDM5DQ9BY66 1539 aa14.05□□□□□ -0.16
PPARGC1A-218ENST00000617484 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
PPARGC1A-218ENST00000617484 DAPK1P53355 1430 aa14.04□□□□□ -0.16
PPARGC1A-218ENST00000617484 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
PPARGC1A-218ENST00000617484 MYO3AQ8NEV4 1616 aa14.04□□□□□ -0.16
PPARGC1A-218ENST00000617484 TNRQ92752 1358 aa14.03□□□□□ -0.16
PPARGC1A-218ENST00000617484 CEP170BQ9Y4F5 1589 aaPredicted RBP14.03□□□□□ -0.16
PPARGC1A-218ENST00000617484 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
PPARGC1A-218ENST00000617484 ABCC3O15438 1527 aa14.02□□□□□ -0.16
PPARGC1A-218ENST00000617484 FAM135AQ9P2D6 1515 aa14.02□□□□□ -0.16
PPARGC1A-218ENST00000617484 SHANK2Q9UPX8 1470 aa14.02□□□□□ -0.16
PPARGC1A-218ENST00000617484 KIF15Q9NS87 1388 aa14.02□□□□□ -0.17
PPARGC1A-218ENST00000617484 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
PPARGC1A-218ENST00000617484 DUOX2Q9NRD8 1548 aa14.01□□□□□ -0.17
PPARGC1A-218ENST00000617484 A2ML1A8K2U0 1454 aa14.01□□□□□ -0.17
PPARGC1A-218ENST00000617484 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
PPARGC1A-218ENST00000617484 PLA2R1Q13018 1463 aa14□□□□□ -0.17
PPARGC1A-218ENST00000617484 DNMT1P26358 1616 aaKnown RBP14□□□□□ -0.17
PPARGC1A-218ENST00000617484 LTBP4Q8N2S1 1624 aa14□□□□□ -0.17
PPARGC1A-218ENST00000617484 PKD2Q13563 968 aa13.99□□□□□ -0.17
PPARGC1A-218ENST00000617484 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
PPARGC1A-218ENST00000617484 CROCC2H7BZ55 1655 aa13.98□□□□□ -0.17
PPARGC1A-218ENST00000617484 ERBINQ96RT1 1412 aa13.97□□□□□ -0.17
PPARGC1A-218ENST00000617484 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
PPARGC1A-218ENST00000617484 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
PPARGC1A-218ENST00000617484 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
PPARGC1A-218ENST00000617484 SPATA31D1Q6ZQQ2 1576 aa13.95□□□□□ -0.18
PPARGC1A-218ENST00000617484 ANKRD30AQ9BXX3 1397 aa13.95□□□□□ -0.18
PPARGC1A-218ENST00000617484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.95□□□□□ -0.18
PPARGC1A-218ENST00000617484 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
PPARGC1A-218ENST00000617484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.187e-7■■□□□ 13.1
PPARGC1A-218ENST00000617484 PRDM15P57071 1507 aaPredicted RBP13.94□□□□□ -0.18
PPARGC1A-218ENST00000617484 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
PPARGC1A-218ENST00000617484 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
PPARGC1A-218ENST00000617484 NEURL4Q96JN8 1562 aa13.92□□□□□ -0.18
PPARGC1A-218ENST00000617484 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
PPARGC1A-218ENST00000617484 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
PPARGC1A-218ENST00000617484 CEP152O94986 1710 aa13.91□□□□□ -0.18
PPARGC1A-218ENST00000617484 VWDEQ8N2E2 1590 aa13.91□□□□□ -0.18
PPARGC1A-218ENST00000617484 UGGT1Q9NYU2 1555 aa13.91□□□□□ -0.18
PPARGC1A-218ENST00000617484 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
PPARGC1A-218ENST00000617484 DEPDC5O75140 1603 aa13.9□□□□□ -0.18
PPARGC1A-218ENST00000617484 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
PPARGC1A-218ENST00000617484 LMTK2Q8IWU2 1503 aa13.88□□□□□ -0.19
PPARGC1A-218ENST00000617484 MED14O60244 1454 aa13.87□□□□□ -0.19
PPARGC1A-218ENST00000617484 ANKRD50Q9ULJ7 1429 aa13.87□□□□□ -0.19
PPARGC1A-218ENST00000617484 LTKP29376 864 aa13.86□□□□□ -0.19
PPARGC1A-218ENST00000617484 KANK1Q14678 1352 aa13.85□□□□□ -0.19
PPARGC1A-218ENST00000617484 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
PPARGC1A-218ENST00000617484 IDI1Q13907 227 aa13.85□□□□□ -0.19
PPARGC1A-218ENST00000617484 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
PPARGC1A-218ENST00000617484 NOS1P29475 1434 aa13.84□□□□□ -0.19
PPARGC1A-218ENST00000617484 ARHGAP23Q9P227 1491 aa13.84□□□□□ -0.19
PPARGC1A-218ENST00000617484 CFAP65Q6ZU64 1925 aaKnown RBP13.83□□□□□ -0.2
PPARGC1A-218ENST00000617484 ROCK1Q13464 1354 aa13.83□□□□□ -0.2
PPARGC1A-218ENST00000617484 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
PPARGC1A-218ENST00000617484 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
PPARGC1A-218ENST00000617484 SLIT1O75093 1534 aa13.81□□□□□ -0.2
PPARGC1A-218ENST00000617484 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
PPARGC1A-218ENST00000617484 SYNMO15061 1565 aa13.81□□□□□ -0.2
PPARGC1A-218ENST00000617484 ITGAEP38570 1179 aa13.81□□□□□ -0.2
PPARGC1A-218ENST00000617484 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
PPARGC1A-218ENST00000617484 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
PPARGC1A-218ENST00000617484 TMEM2Q9UHN6 1383 aa13.8□□□□□ -0.2
PPARGC1A-218ENST00000617484 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
PPARGC1A-218ENST00000617484 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
PPARGC1A-218ENST00000617484 SCAF11Q99590 1463 aaKnown RBP13.79□□□□□ -0.2
PPARGC1A-218ENST00000617484 IQGAP1P46940 1657 aa13.77□□□□□ -0.21
PPARGC1A-218ENST00000617484 RRBP1Q9P2E9 1410 aaKnown RBP13.77□□□□□ -0.21
PPARGC1A-218ENST00000617484 CPS1P31327 1500 aa13.76□□□□□ -0.21
PPARGC1A-218ENST00000617484 SLC52A1Q9NWF4 448 aa13.76□□□□□ -0.21
PPARGC1A-218ENST00000617484 UNC13BO14795 1591 aa13.75□□□□□ -0.21
PPARGC1A-218ENST00000617484 RPRD2Q5VT52 1461 aaKnown RBP13.75□□□□□ -0.21
PPARGC1A-218ENST00000617484 STRCP1A6NGW2 1772 aa13.75□□□□□ -0.21
PPARGC1A-218ENST00000617484 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
PPARGC1A-218ENST00000617484 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
PPARGC1A-218ENST00000617484 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
PPARGC1A-218ENST00000617484 NUP155O75694 1391 aa13.73□□□□□ -0.21
PPARGC1A-218ENST00000617484 TET3O43151 1660 aa13.73□□□□□ -0.21
PPARGC1A-218ENST00000617484 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
PPARGC1A-218ENST00000617484 ADGRB3O60242 1522 aa13.71□□□□□ -0.21
PPARGC1A-218ENST00000617484 KDM5AP29375 1690 aaKnown RBP13.71□□□□□ -0.21
PPARGC1A-218ENST00000617484 ZFYVE9O95405 1425 aa13.71□□□□□ -0.22
PPARGC1A-218ENST00000617484 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
PPARGC1A-218ENST00000617484 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
PPARGC1A-218ENST00000617484 E9PCH4 1651 aa13.69□□□□□ -0.22
PPARGC1A-218ENST00000617484 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
PPARGC1A-218ENST00000617484 NAIPQ13075 1403 aa13.69□□□□□ -0.22
PPARGC1A-218ENST00000617484 TOM1O60784 492 aa13.68□□□□□ -0.22
PPARGC1A-218ENST00000617484 HSPA1LP34931 641 aa13.68□□□□□ -0.22
PPARGC1A-218ENST00000617484 TMEM131LA2VDJ0 1609 aa13.68□□□□□ -0.22
PPARGC1A-218ENST00000617484 RIMS2Q9UQ26 1411 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms