RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 AKNAQ7Z591 1439 aa19.46■□□□□ 0.71
PTPRT-210ENST00000617474 FGD1P98174 961 aa19.45■□□□□ 0.7
PTPRT-210ENST00000617474 CCDC144AA2RUR9 1427 aa19.45■□□□□ 0.7
PTPRT-210ENST00000617474 NAP1L2Q9ULW6 460 aaPredicted RBP19.44■□□□□ 0.7
PTPRT-210ENST00000617474 NBPF8Q3BBV2 869 aa19.43■□□□□ 0.7
PTPRT-210ENST00000617474 NOL8Q76FK4 1167 aaKnown RBP19.43■□□□□ 0.7
PTPRT-210ENST00000617474 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
PTPRT-210ENST00000617474 MSH5O43196 834 aa19.43■□□□□ 0.7
PTPRT-210ENST00000617474 NFKBIBQ15653 356 aa19.43■□□□□ 0.7
PTPRT-210ENST00000617474 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
PTPRT-210ENST00000617474 FOXD4L5Q5VV16 416 aaPredicted RBP19.42■□□□□ 0.7
PTPRT-210ENST00000617474 FOXD4L4Q8WXT5 416 aaPredicted RBP19.42■□□□□ 0.7
PTPRT-210ENST00000617474 GOLGA6L4A6NEF3 574 aa19.42■□□□□ 0.7
PTPRT-210ENST00000617474 IL27Q8NEV9 243 aa19.41■□□□□ 0.7
PTPRT-210ENST00000617474 MYOM3Q5VTT5 1437 aa19.4■□□□□ 0.7
PTPRT-210ENST00000617474 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
PTPRT-210ENST00000617474 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
PTPRT-210ENST00000617474 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
PTPRT-210ENST00000617474 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
PTPRT-210ENST00000617474 FGD5Q6ZNL6 1462 aa19.39■□□□□ 0.69
PTPRT-210ENST00000617474 E9PSI1 815 aa19.39■□□□□ 0.69
PTPRT-210ENST00000617474 MCCP23508 829 aa19.38■□□□□ 0.69
PTPRT-210ENST00000617474 CALD1Q05682 793 aaKnown RBP19.37■□□□□ 0.69
PTPRT-210ENST00000617474 ADAMTS8Q9UP79 889 aa19.37■□□□□ 0.69
PTPRT-210ENST00000617474 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
PTPRT-210ENST00000617474 BRPF3Q9ULD4 1205 aa19.36■□□□□ 0.69
PTPRT-210ENST00000617474 SLC4A10Q6U841 1118 aa19.35■□□□□ 0.69
PTPRT-210ENST00000617474 SPAG9O60271 1321 aaKnown RBP19.35■□□□□ 0.69
PTPRT-210ENST00000617474 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
PTPRT-210ENST00000617474 PANK1Q8TE04 598 aa19.35■□□□□ 0.69
PTPRT-210ENST00000617474 RTF1Q92541 710 aaKnown RBP19.35■□□□□ 0.69
PTPRT-210ENST00000617474 EIF3AQ14152 1382 aaKnown RBP19.35■□□□□ 0.69
PTPRT-210ENST00000617474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.35■□□□□ 0.69
PTPRT-210ENST00000617474 ANKRD45Q5TZF3 282 aa19.34■□□□□ 0.69
PTPRT-210ENST00000617474 FOXD4L6Q3SYB3 417 aaPredicted RBP19.33■□□□□ 0.69
PTPRT-210ENST00000617474 FOXD4L3Q6VB84 417 aaPredicted RBP19.33■□□□□ 0.69
PTPRT-210ENST00000617474 DRC7Q8IY82 874 aa19.33■□□□□ 0.69
PTPRT-210ENST00000617474 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
PTPRT-210ENST00000617474 CHAF1AQ13111 956 aaPredicted RBP19.32■□□□□ 0.68
PTPRT-210ENST00000617474 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
PTPRT-210ENST00000617474 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
PTPRT-210ENST00000617474 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
PTPRT-210ENST00000617474 FRAT2O75474 233 aaPredicted RBP19.31■□□□□ 0.68
PTPRT-210ENST00000617474 ANO8Q9HCE9 1232 aaPredicted RBP19.31■□□□□ 0.68
PTPRT-210ENST00000617474 RSPH4AQ5TD94 716 aa19.3■□□□□ 0.68
PTPRT-210ENST00000617474 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
PTPRT-210ENST00000617474 NUTM2FA1L443 756 aa19.3■□□□□ 0.68
PTPRT-210ENST00000617474 SKAP1Q86WV1 359 aa19.3■□□□□ 0.68
PTPRT-210ENST00000617474 HAP1P54257 671 aaPredicted RBP19.29■□□□□ 0.68
PTPRT-210ENST00000617474 KIAA1211Q6ZU35 1233 aa19.29■□□□□ 0.68
PTPRT-210ENST00000617474 CFTRP13569 1480 aa19.29■□□□□ 0.68
PTPRT-210ENST00000617474 C11orf95C9JLR9 678 aaPredicted RBP19.28■□□□□ 0.68
PTPRT-210ENST00000617474 NBPF1Q3BBV0 1214 aa19.28■□□□□ 0.68
PTPRT-210ENST00000617474 KIAA2012Q0VF49 1180 aa19.28■□□□□ 0.68
PTPRT-210ENST00000617474 HSP90AA2PQ14568 343 aaPredicted RBP19.28■□□□□ 0.68
PTPRT-210ENST00000617474 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
PTPRT-210ENST00000617474 TERF2IPQ9NYB0 399 aa19.28■□□□□ 0.68
PTPRT-210ENST00000617474 RSPH6AQ9H0K4 717 aa19.26■□□□□ 0.67
PTPRT-210ENST00000617474 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
PTPRT-210ENST00000617474 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
PTPRT-210ENST00000617474 DDX11L8A8MPP1 907 aa19.26■□□□□ 0.67
PTPRT-210ENST00000617474 BACH2Q9BYV9 841 aa19.25■□□□□ 0.67
PTPRT-210ENST00000617474 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
PTPRT-210ENST00000617474 PTMSP20962 102 aa19.24■□□□□ 0.67
PTPRT-210ENST00000617474 VSIG10Q8N0Z9 540 aa19.24■□□□□ 0.67
PTPRT-210ENST00000617474 LNPKQ9C0E8 428 aa19.24■□□□□ 0.67
PTPRT-210ENST00000617474 CASKIN1Q8WXD9 1431 aa19.24■□□□□ 0.67
PTPRT-210ENST00000617474 WASHC2CQ9Y4E1 1318 aa19.23■□□□□ 0.67
PTPRT-210ENST00000617474 DZIP1LQ8IYY4 767 aaKnown RBP19.23■□□□□ 0.67
PTPRT-210ENST00000617474 STK31Q9BXU1 1019 aa19.21■□□□□ 0.67
PTPRT-210ENST00000617474 ANKRD50Q9ULJ7 1429 aa19.21■□□□□ 0.67
PTPRT-210ENST00000617474 BCAR3O75815 825 aa19.2■□□□□ 0.66
PTPRT-210ENST00000617474 CHMP5Q9NZZ3 219 aa19.2■□□□□ 0.66
PTPRT-210ENST00000617474 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
PTPRT-210ENST00000617474 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
PTPRT-210ENST00000617474 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
PTPRT-210ENST00000617474 ST18O60284 1047 aa19.2■□□□□ 0.66
PTPRT-210ENST00000617474 HMMRO75330 724 aa19.19■□□□□ 0.66
PTPRT-210ENST00000617474 SYAP1Q96A49 352 aaPredicted RBP19.19■□□□□ 0.66
PTPRT-210ENST00000617474 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
PTPRT-210ENST00000617474 MINK1Q8N4C8 1332 aaPredicted RBP19.18■□□□□ 0.66
PTPRT-210ENST00000617474 NRDCO43847 1150 aa19.17■□□□□ 0.66
PTPRT-210ENST00000617474 RILPL2Q969X0 211 aa19.17■□□□□ 0.66
PTPRT-210ENST00000617474 GOLGA6L6A8MZA4 724 aa19.17■□□□□ 0.66
PTPRT-210ENST00000617474 DDX19BQ9UMR2 479 aa19.16■□□□□ 0.66
PTPRT-210ENST00000617474 RIPK4P57078 832 aa19.16■□□□□ 0.66
PTPRT-210ENST00000617474 HFM1A2PYH4 1435 aa19.16■□□□□ 0.66
PTPRT-210ENST00000617474 CUX1P39880 1505 aa19.15■□□□□ 0.66
PTPRT-210ENST00000617474 PPP2R1AP30153 589 aa19.15■□□□□ 0.66
PTPRT-210ENST00000617474 LTV1Q96GA3 475 aaPredicted RBP19.15■□□□□ 0.66
PTPRT-210ENST00000617474 RUNDC1Q96C34 613 aa19.14■□□□□ 0.65
PTPRT-210ENST00000617474 TCP11L2Q8N4U5 519 aa19.13■□□□□ 0.65
PTPRT-210ENST00000617474 FYCO1Q9BQS8 1478 aa19.13■□□□□ 0.65
PTPRT-210ENST00000617474 CDK11BP21127 795 aaKnown RBP19.13■□□□□ 0.65
PTPRT-210ENST00000617474 SMG6Q86US8 1419 aaKnown RBP19.13■□□□□ 0.65
PTPRT-210ENST00000617474 TMEM132EQ6IEE7 984 aa19.12■□□□□ 0.65
PTPRT-210ENST00000617474 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
PTPRT-210ENST00000617474 PTPRGP23470 1445 aa19.11■□□□□ 0.65
PTPRT-210ENST00000617474 MTHFSP49914 203 aa19.11■□□□□ 0.65
PTPRT-210ENST00000617474 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms