RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 MYT1LQ9UL68 1186 aa22.49■■□□□ 1.19
CBWD1-225ENST00000616944 IQGAP3Q86VI3 1631 aa22.48■■□□□ 1.19
CBWD1-225ENST00000616944 PZPP20742 1482 aa22.48■■□□□ 1.19
CBWD1-225ENST00000616944 PRDM15P57071 1507 aaPredicted RBP22.47■■□□□ 1.19
CBWD1-225ENST00000616944 SIGLEC1Q9BZZ2 1709 aa22.47■■□□□ 1.19
CBWD1-225ENST00000616944 ATP10AO60312 1499 aa22.46■■□□□ 1.19
CBWD1-225ENST00000616944 CCER1Q8TC90 406 aaPredicted RBP22.45■■□□□ 1.18
CBWD1-225ENST00000616944 VWDEQ8N2E2 1590 aa22.44■■□□□ 1.18
CBWD1-225ENST00000616944 FAM135AQ9P2D6 1515 aa22.43■■□□□ 1.18
CBWD1-225ENST00000616944 AGLP35573 1532 aa22.41■■□□□ 1.18
CBWD1-225ENST00000616944 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
CBWD1-225ENST00000616944 NUP155O75694 1391 aa22.4■■□□□ 1.18
CBWD1-225ENST00000616944 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
CBWD1-225ENST00000616944 MPHOSPH9Q99550 1183 aa22.37■■□□□ 1.17
CBWD1-225ENST00000616944 KIF3BO15066 747 aa22.36■■□□□ 1.17
CBWD1-225ENST00000616944 CEP152O94986 1710 aa22.36■■□□□ 1.17
CBWD1-225ENST00000616944 TET3O43151 1660 aa22.35■■□□□ 1.17
CBWD1-225ENST00000616944 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
CBWD1-225ENST00000616944 ZC3H13Q5T200 1668 aaKnown RBP22.33■■□□□ 1.16
CBWD1-225ENST00000616944 LMTK2Q8IWU2 1503 aa22.32■■□□□ 1.16
CBWD1-225ENST00000616944 E9PCH4 1651 aa22.32■■□□□ 1.16
CBWD1-225ENST00000616944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.29■■□□□ 1.16
CBWD1-225ENST00000616944 ABCC3O15438 1527 aa22.28■■□□□ 1.16
CBWD1-225ENST00000616944 KANK1Q14678 1352 aa22.28■■□□□ 1.16
CBWD1-225ENST00000616944 EFCAB6Q5THR3 1501 aa22.28■■□□□ 1.16
CBWD1-225ENST00000616944 CAMSAP1Q5T5Y3 1602 aa22.26■■□□□ 1.15
CBWD1-225ENST00000616944 ANKRD30BQ9BXX2 1392 aa22.26■■□□□ 1.15
CBWD1-225ENST00000616944 PKD2Q13563 968 aa22.25■■□□□ 1.15
CBWD1-225ENST00000616944 FOXD1Q16676 465 aa22.24■■□□□ 1.15
CBWD1-225ENST00000616944 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
CBWD1-225ENST00000616944 GGT6Q6P531 493 aa22.22■■□□□ 1.15
CBWD1-225ENST00000616944 CLTCQ00610 1675 aaKnown RBP22.19■■□□□ 1.14
CBWD1-225ENST00000616944 PLA2R1Q13018 1463 aa22.18■■□□□ 1.14
CBWD1-225ENST00000616944 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
CBWD1-225ENST00000616944 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
CBWD1-225ENST00000616944 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
CBWD1-225ENST00000616944 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
CBWD1-225ENST00000616944 NPATQ14207 1427 aa22.16■■□□□ 1.14
CBWD1-225ENST00000616944 ARHGAP31Q2M1Z3 1444 aa22.16■■□□□ 1.14
CBWD1-225ENST00000616944 CFAP65Q6ZU64 1925 aaKnown RBP22.15■■□□□ 1.14
CBWD1-225ENST00000616944 TRPM2O94759 1503 aa22.15■■□□□ 1.14
CBWD1-225ENST00000616944 WASHC2CQ9Y4E1 1318 aa22.15■■□□□ 1.14
CBWD1-225ENST00000616944 PTPRTO14522 1441 aa22.15■■□□□ 1.14
CBWD1-225ENST00000616944 MROH2AA6NES4 1674 aa22.13■■□□□ 1.13
CBWD1-225ENST00000616944 FER1L4A9Z1Z3 1794 aa22.12■■□□□ 1.13
CBWD1-225ENST00000616944 PREX1Q8TCU6 1659 aa22.11■■□□□ 1.13
CBWD1-225ENST00000616944 CLTCL1P53675 1640 aa22.09■■□□□ 1.13
CBWD1-225ENST00000616944 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.13
CBWD1-225ENST00000616944 MLECQ14165 292 aa22.07■■□□□ 1.12
CBWD1-225ENST00000616944 SYNMO15061 1565 aa22.07■■□□□ 1.12
CBWD1-225ENST00000616944 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
CBWD1-225ENST00000616944 NOS1P29475 1434 aa22.06■■□□□ 1.12
CBWD1-225ENST00000616944 PIK3C2BO00750 1634 aa22.06■■□□□ 1.12
CBWD1-225ENST00000616944 KDM4FA0A1W2PPD8 638 aa22.06■■□□□ 1.12
CBWD1-225ENST00000616944 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
CBWD1-225ENST00000616944 CNTLNQ9NXG0 1405 aa22.05■■□□□ 1.12
CBWD1-225ENST00000616944 ADAMTSL3P82987 1691 aa22.05■■□□□ 1.12
CBWD1-225ENST00000616944 TIMELESSQ9UNS1 1208 aa22.04■■□□□ 1.12
CBWD1-225ENST00000616944 SPATA31D1Q6ZQQ2 1576 aa22.03■■□□□ 1.12
CBWD1-225ENST00000616944 UGGT1Q9NYU2 1555 aa22.03■■□□□ 1.12
CBWD1-225ENST00000616944 KIF1BO60333 1816 aa22.02■■□□□ 1.12
CBWD1-225ENST00000616944 MADDQ8WXG6 1647 aa22.02■■□□□ 1.12
CBWD1-225ENST00000616944 ERVK-7P63135 1459 aa22.02■■□□□ 1.11
CBWD1-225ENST00000616944 NEURL4Q96JN8 1562 aa22.01■■□□□ 1.11
CBWD1-225ENST00000616944 C3P01024 1663 aa22.01■■□□□ 1.11
CBWD1-225ENST00000616944 TONSLQ96HA7 1378 aa22■■□□□ 1.11
CBWD1-225ENST00000616944 ZMYM3Q14202 1370 aa21.98■■□□□ 1.11
CBWD1-225ENST00000616944 SPATA31E1Q6ZUB1 1445 aa21.97■■□□□ 1.11
CBWD1-225ENST00000616944 RIMS1Q86UR5 1692 aaKnown RBP21.97■■□□□ 1.11
CBWD1-225ENST00000616944 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
CBWD1-225ENST00000616944 ADGRB3O60242 1522 aa21.94■■□□□ 1.1
CBWD1-225ENST00000616944 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
CBWD1-225ENST00000616944 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
CBWD1-225ENST00000616944 MYO5BQ9ULV0 1848 aa21.92■■□□□ 1.1
CBWD1-225ENST00000616944 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
CBWD1-225ENST00000616944 TMEM131LA2VDJ0 1609 aa21.89■■□□□ 1.1
CBWD1-225ENST00000616944 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
CBWD1-225ENST00000616944 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
CBWD1-225ENST00000616944 KDM5AP29375 1690 aaKnown RBP21.87■■□□□ 1.09
CBWD1-225ENST00000616944 PPLO60437 1756 aa21.86■■□□□ 1.09
CBWD1-225ENST00000616944 PTPRMP28827 1452 aa21.85■■□□□ 1.09
CBWD1-225ENST00000616944 IDI1Q13907 227 aa21.84■■□□□ 1.09
CBWD1-225ENST00000616944 UHRF1BP1Q6BDS2 1440 aa21.83■■□□□ 1.08
CBWD1-225ENST00000616944 TNRQ92752 1358 aa21.82■■□□□ 1.08
CBWD1-225ENST00000616944 UBR1Q8IWV7 1749 aa21.81■■□□□ 1.08
CBWD1-225ENST00000616944 MYO3AQ8NEV4 1616 aa21.81■■□□□ 1.08
CBWD1-225ENST00000616944 CEBPAP49715 358 aaPredicted RBP21.8■■□□□ 1.08
CBWD1-225ENST00000616944 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
CBWD1-225ENST00000616944 NLRP1Q9C000 1473 aa21.79■■□□□ 1.08
CBWD1-225ENST00000616944 SETD1BQ9UPS6 1966 aaKnown RBP21.79■■□□□ 1.08
CBWD1-225ENST00000616944 NEXMIFQ5QGS0 1516 aa21.79■■□□□ 1.08
CBWD1-225ENST00000616944 MYOM2P54296 1465 aa21.78■■□□□ 1.08
CBWD1-225ENST00000616944 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
CBWD1-225ENST00000616944 PRAG1Q86YV5 1406 aa21.77■■□□□ 1.08
CBWD1-225ENST00000616944 TRPM1Q7Z4N2 1603 aa21.77■■□□□ 1.08
CBWD1-225ENST00000616944 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
CBWD1-225ENST00000616944 NBPF8Q3BBV2 869 aa21.76■■□□□ 1.07
CBWD1-225ENST00000616944 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
CBWD1-225ENST00000616944 NRXN1Q9ULB1 1477 aa21.74■■□□□ 1.07
CBWD1-225ENST00000616944 STAC3Q96MF2 364 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms