RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 KIDINS220Q9ULH0 1771 aa17.32■□□□□ 0.36
TULP4-206ENST00000616856 KDM5DQ9BY66 1539 aa17.32■□□□□ 0.36
TULP4-206ENST00000616856 KDM5CP41229 1560 aa17.31■□□□□ 0.36
TULP4-206ENST00000616856 KIF13AQ9H1H9 1805 aa17.31■□□□□ 0.36
TULP4-206ENST00000616856 UNC13BO14795 1591 aa17.31■□□□□ 0.36
TULP4-206ENST00000616856 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
TULP4-206ENST00000616856 FAM135AQ9P2D6 1515 aa17.3■□□□□ 0.36
TULP4-206ENST00000616856 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
TULP4-206ENST00000616856 HECW2Q9P2P5 1572 aa17.29■□□□□ 0.36
TULP4-206ENST00000616856 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
TULP4-206ENST00000616856 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
TULP4-206ENST00000616856 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
TULP4-206ENST00000616856 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
TULP4-206ENST00000616856 KIF3BO15066 747 aa17.25■□□□□ 0.35
TULP4-206ENST00000616856 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
TULP4-206ENST00000616856 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
TULP4-206ENST00000616856 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
TULP4-206ENST00000616856 ABCA6Q8N139 1617 aa17.23■□□□□ 0.35
TULP4-206ENST00000616856 A2MP01023 1474 aa17.23■□□□□ 0.35
TULP4-206ENST00000616856 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
TULP4-206ENST00000616856 FRMPD1Q5SYB0 1578 aa17.22■□□□□ 0.35
TULP4-206ENST00000616856 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
TULP4-206ENST00000616856 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
TULP4-206ENST00000616856 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
TULP4-206ENST00000616856 DEPDC5O75140 1603 aa17.2■□□□□ 0.34
TULP4-206ENST00000616856 ANP32CO43423 234 aa17.19■□□□□ 0.34
TULP4-206ENST00000616856 DIP2CQ9Y2E4 1556 aa17.18■□□□□ 0.34
TULP4-206ENST00000616856 YEATS2Q9ULM3 1422 aa17.18■□□□□ 0.34
TULP4-206ENST00000616856 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
TULP4-206ENST00000616856 DNAJC5Q9H3Z4 198 aa17.17■□□□□ 0.34
TULP4-206ENST00000616856 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
TULP4-206ENST00000616856 KANK1Q14678 1352 aa17.17■□□□□ 0.34
TULP4-206ENST00000616856 NBPF8Q3BBV2 869 aa17.16■□□□□ 0.34
TULP4-206ENST00000616856 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
TULP4-206ENST00000616856 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
TULP4-206ENST00000616856 ZMYM4Q5VZL5 1548 aa17.15■□□□□ 0.34
TULP4-206ENST00000616856 GGT6Q6P531 493 aa17.14■□□□□ 0.33
TULP4-206ENST00000616856 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
TULP4-206ENST00000616856 COL17A1Q9UMD9 1497 aaPredicted RBP17.14■□□□□ 0.33
TULP4-206ENST00000616856 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
TULP4-206ENST00000616856 E9PCH4 1651 aa17.12■□□□□ 0.33
TULP4-206ENST00000616856 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
TULP4-206ENST00000616856 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
TULP4-206ENST00000616856 EIF4G2P78344 907 aaKnown RBP eCLIP17.12■□□□□ 0.33
TULP4-206ENST00000616856 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
TULP4-206ENST00000616856 CCDC144AA2RUR9 1427 aa17.11■□□□□ 0.33
TULP4-206ENST00000616856 TET3O43151 1660 aa17.11■□□□□ 0.33
TULP4-206ENST00000616856 CEP152O94986 1710 aa17.09■□□□□ 0.33
TULP4-206ENST00000616856 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.33
TULP4-206ENST00000616856 ATP10AO60312 1499 aa17.07■□□□□ 0.32
TULP4-206ENST00000616856 WASHC2CQ9Y4E1 1318 aa17.06■□□□□ 0.32
TULP4-206ENST00000616856 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
TULP4-206ENST00000616856 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
TULP4-206ENST00000616856 SPHKAPQ2M3C7 1700 aa17.05■□□□□ 0.32
TULP4-206ENST00000616856 SPATA31E1Q6ZUB1 1445 aa17.04■□□□□ 0.32
TULP4-206ENST00000616856 RGL3Q3MIN7 710 aa17.04■□□□□ 0.32
TULP4-206ENST00000616856 LMTK2Q8IWU2 1503 aa17.04■□□□□ 0.32
TULP4-206ENST00000616856 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
TULP4-206ENST00000616856 ABCC3O15438 1527 aa17.02■□□□□ 0.32
TULP4-206ENST00000616856 TRPM2O94759 1503 aa17.02■□□□□ 0.32
TULP4-206ENST00000616856 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
TULP4-206ENST00000616856 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.32
TULP4-206ENST00000616856 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.31
TULP4-206ENST00000616856 PTPRTO14522 1441 aa17.02■□□□□ 0.31
TULP4-206ENST00000616856 ARHGEF40Q8TER5 1519 aa17.01■□□□□ 0.31
TULP4-206ENST00000616856 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
TULP4-206ENST00000616856 NPATQ14207 1427 aa16.99■□□□□ 0.31
TULP4-206ENST00000616856 SIGLEC1Q9BZZ2 1709 aa16.99■□□□□ 0.31
TULP4-206ENST00000616856 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
TULP4-206ENST00000616856 CLTCL1P53675 1640 aa16.99■□□□□ 0.31
TULP4-206ENST00000616856 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
TULP4-206ENST00000616856 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
TULP4-206ENST00000616856 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
TULP4-206ENST00000616856 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
TULP4-206ENST00000616856 MLECQ14165 292 aa16.97■□□□□ 0.31
TULP4-206ENST00000616856 BCANQ96GW7 911 aa16.96■□□□□ 0.31
TULP4-206ENST00000616856 AGLP35573 1532 aa16.95■□□□□ 0.3
TULP4-206ENST00000616856 ZC3H13Q5T200 1668 aaKnown RBP16.95■□□□□ 0.3
TULP4-206ENST00000616856 FKBP8Q14318 412 aa16.94■□□□□ 0.3
TULP4-206ENST00000616856 UHRF1BP1Q6BDS2 1440 aa16.93■□□□□ 0.3
TULP4-206ENST00000616856 NEFLP07196 543 aa16.93■□□□□ 0.3
TULP4-206ENST00000616856 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
TULP4-206ENST00000616856 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
TULP4-206ENST00000616856 USP47Q96K76 1375 aa16.92■□□□□ 0.3
TULP4-206ENST00000616856 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
TULP4-206ENST00000616856 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
TULP4-206ENST00000616856 PRAG1Q86YV5 1406 aa16.89■□□□□ 0.29
TULP4-206ENST00000616856 KIF1BO60333 1816 aa16.89■□□□□ 0.29
TULP4-206ENST00000616856 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
TULP4-206ENST00000616856 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
TULP4-206ENST00000616856 CLTCQ00610 1675 aaKnown RBP16.89■□□□□ 0.29
TULP4-206ENST00000616856 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
TULP4-206ENST00000616856 NOS1P29475 1434 aa16.87■□□□□ 0.29
TULP4-206ENST00000616856 SYNMO15061 1565 aa16.87■□□□□ 0.29
TULP4-206ENST00000616856 MROH2AA6NES4 1674 aa16.86■□□□□ 0.29
TULP4-206ENST00000616856 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
TULP4-206ENST00000616856 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
TULP4-206ENST00000616856 FBXO31Q5XUX0 539 aaPredicted RBP16.85■□□□□ 0.29
TULP4-206ENST00000616856 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
TULP4-206ENST00000616856 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms