RNA–Protein interactions for RNA: ENST00000616657.1

CNTNAP3P1-201, Transcript of contactin associated protein-like 3 pseudogene 1, humanhuman

BASIC

Gene CNTNAP3P1, Length 906 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3P1-201ENST00000616657 HSPA2P54652 639 aa10.54□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 SCAPERQ9BY12 1400 aa10.54□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 DIP2CQ9Y2E4 1556 aa10.54□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 C3P01024 1663 aa10.53□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 ATP1B4Q9UN42 357 aaPredicted RBP10.53□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 ZNF518AQ6AHZ1 1483 aa10.53□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 ARHGAP35Q9NRY4 1499 aa10.53□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 CDC42BPAQ5VT25 1732 aa10.53□□□□□ -0.72
CNTNAP3P1-201ENST00000616657 PLCH2O75038 1416 aa10.52□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 STRCQ7RTU9 1775 aa10.52□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 CLIP1P30622 1438 aa10.51□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 PELP1Q8IZL8 1130 aaKnown RBP10.51□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 ABCC1P33527 1531 aa10.51□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 ATP10AO60312 1499 aa10.5□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 TROQ12816 1431 aaPredicted RBP10.49□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 REREQ9P2R6 1566 aa10.48□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 MYT1LQ9UL68 1186 aa10.47□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 UHRF1BP1Q6BDS2 1440 aa10.47□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 VPS8Q8N3P4 1428 aa10.47□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 CCDC18Q5T9S5 1454 aa10.47□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 KIDINS220Q9ULH0 1771 aa10.47□□□□□ -0.73
CNTNAP3P1-201ENST00000616657 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 EFCAB2Q5VUJ9 269 aa10.45□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 MROH2AA6NES4 1674 aa10.44□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 CDK11AQ9UQ88 783 aaPredicted RBP10.44□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 SPATA31D1Q6ZQQ2 1576 aa10.43□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 CLTCQ00610 1675 aaKnown RBP10.43□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 SAMD9LQ8IVG5 1584 aa10.43□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 CERKQ8TCT0 537 aa10.42□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 FYCO1Q9BQS8 1478 aa10.42□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 ZNF142P52746 1687 aaPredicted RBP10.41□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 PAK3O75914 559 aaPredicted RBP10.41□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 CEBPAP49715 358 aaPredicted RBP10.41□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 CLCN6P51797 869 aa10.41□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 PCGF6Q9BYE7 350 aa10.41□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 AGLP35573 1532 aa10.41□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 MLH3Q9UHC1 1453 aa10.41□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 INO80Q9ULG1 1556 aaPredicted RBP10.4□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 POTEIP0CG38 1075 aa10.4□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
CNTNAP3P1-201ENST00000616657 CASKIN1Q8WXD9 1431 aa10.4□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 TRAPPC8Q9Y2L5 1435 aa10.4□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 PHF12Q96QT6 1004 aa10.39□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 ATP7AQ04656 1500 aa10.38□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 ADGBQ8N7X0 1667 aa10.38□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 CAMSAP1Q5T5Y3 1602 aa10.38□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 PKD2Q13563 968 aa10.38□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 PLXNC1O60486 1568 aa10.37□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 POLR1AO95602 1720 aaPredicted RBP10.37□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 DISP3Q9P2K9 1392 aa10.36□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 CEP170BQ9Y4F5 1589 aaPredicted RBP10.35□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 NCOA1Q15788 1441 aa10.34□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 LTBP4Q8N2S1 1624 aa10.34□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 GSE1Q14687 1217 aa10.34□□□□□ -0.75
CNTNAP3P1-201ENST00000616657 PTPRTO14522 1441 aa10.33□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 TIAM1Q13009 1591 aa10.33□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 MAP3K1Q13233 1512 aa10.33□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 ECM2O94769 699 aaPredicted RBP10.32□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 EHBP1L1Q8N3D4 1523 aa10.32□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 NPATQ14207 1427 aa10.32□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 PLEKHH2Q8IVE3 1493 aa10.31□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 GPATCH8Q9UKJ3 1502 aaKnown RBP10.31□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 A2MP01023 1474 aa10.3□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 IQSEC2Q5JU85 1478 aa10.3□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 SPAG9O60271 1321 aaKnown RBP10.3□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 CIZ1Q9ULV3 898 aaPredicted RBP10.29□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 MTUS2Q5JR59 1369 aa10.27□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 CCNB3Q8WWL7 1395 aa10.27□□□□□ -0.76
CNTNAP3P1-201ENST00000616657 PLA2R1Q13018 1463 aa10.27□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 NUBP1P53384 320 aa10.26□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 KDM5DQ9BY66 1539 aa10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 HNRNPMP52272 730 aaKnown RBP eCLIP10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 ILDR2Q71H61 639 aa10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 PPARGC1BQ86YN6 1023 aaKnown RBP10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 RASEFQ8IZ41 740 aa10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 MS4A3Q96HJ5 214 aa10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 ZMYM3Q14202 1370 aa10.25□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 PTPRKQ15262 1439 aa10.24□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
CNTNAP3P1-201ENST00000616657 NEURL4Q96JN8 1562 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms