RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
RFC3-203ENST00000616236 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
RFC3-203ENST00000616236 PLSCR2Q9NRY7 297 aa8.62□□□□□ -1.03
RFC3-203ENST00000616236 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
RFC3-203ENST00000616236 COG6Q9Y2V7 657 aa8.62□□□□□ -1.03
RFC3-203ENST00000616236 TBC1D12O60347 775 aa8.61□□□□□ -1.03
RFC3-203ENST00000616236 EVI5O60447 810 aa8.61□□□□□ -1.03
RFC3-203ENST00000616236 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
RFC3-203ENST00000616236 RETREG2Q8NC44 543 aa8.61□□□□□ -1.03
RFC3-203ENST00000616236 PHOX2BQ99453 314 aa8.61□□□□□ -1.03
RFC3-203ENST00000616236 TMEM121BQ9BXQ6 578 aaPredicted RBP8.61□□□□□ -1.03
RFC3-203ENST00000616236 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
RFC3-203ENST00000616236 BOLA1Q9Y3E2 137 aa8.6□□□□□ -1.03
RFC3-203ENST00000616236 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
RFC3-203ENST00000616236 NPDC1Q9NQX5 325 aaPredicted RBP8.59□□□□□ -1.03
RFC3-203ENST00000616236 ZNF330Q9Y3S2 320 aaPredicted RBP8.59□□□□□ -1.03
RFC3-203ENST00000616236 G3V3G9 751 aa8.57□□□□□ -1.04
RFC3-203ENST00000616236 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
RFC3-203ENST00000616236 SNRKQ9NRH2 765 aa8.57□□□□□ -1.04
RFC3-203ENST00000616236 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
RFC3-203ENST00000616236 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
RFC3-203ENST00000616236 IRF5Q13568 498 aa8.55□□□□□ -1.04
RFC3-203ENST00000616236 TMCO4Q5TGY1 634 aa8.55□□□□□ -1.04
RFC3-203ENST00000616236 BANK1Q8NDB2 785 aa8.55□□□□□ -1.04
RFC3-203ENST00000616236 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
RFC3-203ENST00000616236 GZF1Q9H116 711 aaPredicted RBP8.55□□□□□ -1.04
RFC3-203ENST00000616236 TMEM92Q6UXU6 159 aa8.54□□□□□ -1.04
RFC3-203ENST00000616236 MAP3K7O43318 606 aa8.53□□□□□ -1.04
RFC3-203ENST00000616236 RFC5P40937 340 aa8.53□□□□□ -1.04
RFC3-203ENST00000616236 CLK2P49760 499 aaKnown RBP8.53□□□□□ -1.04
RFC3-203ENST00000616236 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
RFC3-203ENST00000616236 EN1Q05925 392 aaPredicted RBP8.53□□□□□ -1.04
RFC3-203ENST00000616236 NLRP7Q8WX94 980 aa8.53□□□□□ -1.04
RFC3-203ENST00000616236 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
RFC3-203ENST00000616236 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
RFC3-203ENST00000616236 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
RFC3-203ENST00000616236 FBXO31Q5XUX0 539 aaPredicted RBP8.51□□□□□ -1.05
RFC3-203ENST00000616236 RBM33Q96EV2 1170 aaKnown RBP8.51□□□□□ -1.05
RFC3-203ENST00000616236 ANO8Q9HCE9 1232 aaPredicted RBP8.51□□□□□ -1.05
RFC3-203ENST00000616236 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
RFC3-203ENST00000616236 METTL3Q86U44 580 aaKnown RBP8.5□□□□□ -1.05
RFC3-203ENST00000616236 EPAS1Q99814 870 aa8.5□□□□□ -1.05
RFC3-203ENST00000616236 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
RFC3-203ENST00000616236 PPP1R15AO75807 674 aaPredicted RBP8.49□□□□□ -1.05
RFC3-203ENST00000616236 PHF14O94880 888 aa8.49□□□□□ -1.05
RFC3-203ENST00000616236 TSR1Q2NL82 804 aaKnown RBP8.49□□□□□ -1.05
RFC3-203ENST00000616236 TMEM259Q4ZIN3 620 aa8.49□□□□□ -1.05
RFC3-203ENST00000616236 SP7Q8TDD2 431 aaPredicted RBP8.49□□□□□ -1.05
RFC3-203ENST00000616236 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
RFC3-203ENST00000616236 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
RFC3-203ENST00000616236 C19orf67A6NJJ6 358 aa8.48□□□□□ -1.05
RFC3-203ENST00000616236 GALR2O43603 387 aaPredicted RBP8.48□□□□□ -1.05
RFC3-203ENST00000616236 OATP04181 439 aa8.48□□□□□ -1.05
RFC3-203ENST00000616236 ATN1P54259 1190 aaPredicted RBP8.48□□□□□ -1.05
RFC3-203ENST00000616236 CALR3Q96L12 384 aaKnown RBP8.48□□□□□ -1.05
RFC3-203ENST00000616236 FOXD4L5Q5VV16 416 aaPredicted RBP8.47□□□□□ -1.05
RFC3-203ENST00000616236 PTCD2Q8WV60 388 aaKnown RBP8.47□□□□□ -1.05
RFC3-203ENST00000616236 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
RFC3-203ENST00000616236 PPP2R2DQ66LE6 453 aa8.46□□□□□ -1.06
RFC3-203ENST00000616236 WWC1Q8IX03 1113 aa8.46□□□□□ -1.06
RFC3-203ENST00000616236 MTMR14Q8NCE2 650 aa8.46□□□□□ -1.06
RFC3-203ENST00000616236 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
RFC3-203ENST00000616236 ABL2P42684 1182 aa8.45□□□□□ -1.06
RFC3-203ENST00000616236 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
RFC3-203ENST00000616236 PXYLP1Q8TE99 480 aa8.45□□□□□ -1.06
RFC3-203ENST00000616236 FBXW7Q969H0 707 aa8.45□□□□□ -1.06
RFC3-203ENST00000616236 L3MBTL3Q96JM7 780 aaPredicted RBP8.45□□□□□ -1.06
RFC3-203ENST00000616236 POM121CA8CG34 1229 aa8.44□□□□□ -1.06
RFC3-203ENST00000616236 PDE4CQ08493 712 aa8.44□□□□□ -1.06
RFC3-203ENST00000616236 IER5LQ5T953 404 aa8.44□□□□□ -1.06
RFC3-203ENST00000616236 SLAIN1Q8ND83 568 aa8.44□□□□□ -1.06
RFC3-203ENST00000616236 ZNF428Q96B54 188 aa8.44□□□□□ -1.06
RFC3-203ENST00000616236 PCDHGA10Q9Y5H3 936 aa8.44□□□□□ -1.06
RFC3-203ENST00000616236 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
RFC3-203ENST00000616236 PLCG2P16885 1265 aa8.43□□□□□ -1.06
RFC3-203ENST00000616236 RBM25P49756 843 aaKnown RBP8.43□□□□□ -1.06
RFC3-203ENST00000616236 PADI6Q6TGC4 694 aa8.43□□□□□ -1.06
RFC3-203ENST00000616236 RIC3Q7Z5B4 369 aa8.43□□□□□ -1.06
RFC3-203ENST00000616236 GLMNQ92990 594 aa8.43□□□□□ -1.06
RFC3-203ENST00000616236 TYW1BQ6NUM6 668 aa8.42□□□□□ -1.06
RFC3-203ENST00000616236 TBC1D2BQ9UPU7 963 aa8.41□□□□□ -1.06
RFC3-203ENST00000616236 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
RFC3-203ENST00000616236 SPIRE2Q8WWL2 714 aa8.4□□□□□ -1.06
RFC3-203ENST00000616236 PRM3Q9NNZ6 103 aa8.4□□□□□ -1.06
RFC3-203ENST00000616236 PATL2C9JE40 543 aaKnown RBP8.39□□□□□ -1.07
RFC3-203ENST00000616236 SLC34A2O95436 690 aa8.38□□□□□ -1.07
RFC3-203ENST00000616236 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
RFC3-203ENST00000616236 PBXIP1Q96AQ6 731 aa8.38□□□□□ -1.07
RFC3-203ENST00000616236 SOCS7O14512 581 aa8.37□□□□□ -1.07
RFC3-203ENST00000616236 SPTLC1O15269 473 aa8.37□□□□□ -1.07
RFC3-203ENST00000616236 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
RFC3-203ENST00000616236 CERKQ8TCT0 537 aa8.37□□□□□ -1.07
RFC3-203ENST00000616236 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
RFC3-203ENST00000616236 AP1G2O75843 785 aa8.36□□□□□ -1.07
RFC3-203ENST00000616236 BRD1O95696 1058 aa8.36□□□□□ -1.07
RFC3-203ENST00000616236 RFX1P22670 979 aa8.36□□□□□ -1.07
RFC3-203ENST00000616236 KCNA1Q09470 495 aa8.36□□□□□ -1.07
RFC3-203ENST00000616236 ASTLQ6HA08 431 aaPredicted RBP8.36□□□□□ -1.07
RFC3-203ENST00000616236 TTC13Q8NBP0 860 aa8.36□□□□□ -1.07
RFC3-203ENST00000616236 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms