RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 KIF15Q9NS87 1388 aa12.61□□□□□ -0.39
VPS11-206ENST00000614944 VWDEQ8N2E2 1590 aa12.61□□□□□ -0.39
VPS11-206ENST00000614944 DENND4BO75064 1496 aaPredicted RBP12.61□□□□□ -0.39
VPS11-206ENST00000614944 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
VPS11-206ENST00000614944 CCDC136Q96JN2 1154 aa12.6□□□□□ -0.39
VPS11-206ENST00000614944 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
VPS11-206ENST00000614944 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
VPS11-206ENST00000614944 PZPP20742 1482 aa12.59□□□□□ -0.39
VPS11-206ENST00000614944 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.39
VPS11-206ENST00000614944 ITGAEP38570 1179 aa12.58□□□□□ -0.4
VPS11-206ENST00000614944 PRDM15P57071 1507 aaPredicted RBP12.58□□□□□ -0.4
VPS11-206ENST00000614944 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
VPS11-206ENST00000614944 ERICH6BQ5W0A0 696 aa12.56□□□□□ -0.4
VPS11-206ENST00000614944 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
VPS11-206ENST00000614944 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
VPS11-206ENST00000614944 ABCA6Q8N139 1617 aa12.56□□□□□ -0.4
VPS11-206ENST00000614944 LMTK2Q8IWU2 1503 aa12.56□□□□□ -0.4
VPS11-206ENST00000614944 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
VPS11-206ENST00000614944 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
VPS11-206ENST00000614944 MROH1Q8NDA8 1641 aa12.55□□□□□ -0.4
VPS11-206ENST00000614944 ZC3H13Q5T200 1668 aaKnown RBP12.54□□□□□ -0.4
VPS11-206ENST00000614944 DHX29Q7Z478 1369 aaKnown RBP12.54□□□□□ -0.4
VPS11-206ENST00000614944 RRP7BPQ9NSQ0 103 aa12.54□□□□□ -0.4
VPS11-206ENST00000614944 ATP10AO60312 1499 aa12.54□□□□□ -0.4
VPS11-206ENST00000614944 TET3O43151 1660 aa12.53□□□□□ -0.4
VPS11-206ENST00000614944 AGLP35573 1532 aa12.53□□□□□ -0.4
VPS11-206ENST00000614944 NEURL4Q96JN8 1562 aa12.53□□□□□ -0.4
VPS11-206ENST00000614944 CHIC2Q9UKJ5 165 aa12.52□□□□□ -0.4
VPS11-206ENST00000614944 A2MP01023 1474 aa12.52□□□□□ -0.41
VPS11-206ENST00000614944 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
VPS11-206ENST00000614944 FAM69CQ0P6D2 419 aa12.51□□□□□ -0.41
VPS11-206ENST00000614944 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
VPS11-206ENST00000614944 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
VPS11-206ENST00000614944 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
VPS11-206ENST00000614944 MPHOSPH9Q99550 1183 aa12.48□□□□□ -0.41
VPS11-206ENST00000614944 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
VPS11-206ENST00000614944 NEFLP07196 543 aa12.47□□□□□ -0.41
VPS11-206ENST00000614944 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
VPS11-206ENST00000614944 AFAP1Q8N556 730 aa12.47□□□□□ -0.41
VPS11-206ENST00000614944 E9PCH4 1651 aa12.45□□□□□ -0.42
VPS11-206ENST00000614944 EFCAB6Q5THR3 1501 aa12.45□□□□□ -0.42
VPS11-206ENST00000614944 SPHKAPQ2M3C7 1700 aa12.44□□□□□ -0.42
VPS11-206ENST00000614944 NUP155O75694 1391 aa12.44□□□□□ -0.42
VPS11-206ENST00000614944 PTPRTO14522 1441 aa12.43□□□□□ -0.42
VPS11-206ENST00000614944 TRPM2O94759 1503 aa12.43□□□□□ -0.42
VPS11-206ENST00000614944 DIEXFQ68CQ4 756 aaKnown RBP12.43□□□□□ -0.42
VPS11-206ENST00000614944 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
VPS11-206ENST00000614944 ARHGAP31Q2M1Z3 1444 aa12.42□□□□□ -0.42
VPS11-206ENST00000614944 KANK1Q14678 1352 aa12.42□□□□□ -0.42
VPS11-206ENST00000614944 CEP152O94986 1710 aa12.41□□□□□ -0.42
VPS11-206ENST00000614944 CAMSAP1Q5T5Y3 1602 aa12.41□□□□□ -0.42
VPS11-206ENST00000614944 ABCC3O15438 1527 aa12.4□□□□□ -0.42
VPS11-206ENST00000614944 COL17A1Q9UMD9 1497 aaPredicted RBP12.4□□□□□ -0.43
VPS11-206ENST00000614944 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
VPS11-206ENST00000614944 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
VPS11-206ENST00000614944 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
VPS11-206ENST00000614944 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
VPS11-206ENST00000614944 YEATS2Q9ULM3 1422 aa12.38□□□□□ -0.43
VPS11-206ENST00000614944 PLA2R1Q13018 1463 aa12.37□□□□□ -0.43
VPS11-206ENST00000614944 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
VPS11-206ENST00000614944 PDE4CQ08493 712 aa12.37□□□□□ -0.43
VPS11-206ENST00000614944 PIK3C2BO00750 1634 aa12.37□□□□□ -0.43
VPS11-206ENST00000614944 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
VPS11-206ENST00000614944 SIGLEC1Q9BZZ2 1709 aa12.36□□□□□ -0.43
VPS11-206ENST00000614944 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
VPS11-206ENST00000614944 DEKP35659 375 aaKnown RBP12.35□□□□□ -0.43
VPS11-206ENST00000614944 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
VPS11-206ENST00000614944 PKD2Q13563 968 aa12.35□□□□□ -0.43
VPS11-206ENST00000614944 ARXQ96QS3 562 aa12.34□□□□□ -0.43
VPS11-206ENST00000614944 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
VPS11-206ENST00000614944 LAMC1P11047 1609 aa12.33□□□□□ -0.44
VPS11-206ENST00000614944 IFT172Q9UG01 1749 aa12.33□□□□□ -0.44
VPS11-206ENST00000614944 TONSLQ96HA7 1378 aa12.32□□□□□ -0.44
VPS11-206ENST00000614944 CLTCL1P53675 1640 aa12.32□□□□□ -0.44
VPS11-206ENST00000614944 NOS1P29475 1434 aa12.32□□□□□ -0.44
VPS11-206ENST00000614944 STAC3Q96MF2 364 aa12.32□□□□□ -0.44
VPS11-206ENST00000614944 KDM5AP29375 1690 aaKnown RBP12.32□□□□□ -0.44
VPS11-206ENST00000614944 YTHDC1Q96MU7 727 aaKnown RBP12.32□□□□□ -0.44
VPS11-206ENST00000614944 KIF1BO60333 1816 aa12.31□□□□□ -0.44
VPS11-206ENST00000614944 PREX1Q8TCU6 1659 aa12.31□□□□□ -0.44
VPS11-206ENST00000614944 PPP1R15AO75807 674 aaPredicted RBP12.31□□□□□ -0.44
VPS11-206ENST00000614944 KIF3BO15066 747 aa12.3□□□□□ -0.44
VPS11-206ENST00000614944 SUPT16HQ9Y5B9 1047 aaKnown RBP12.3□□□□□ -0.44
VPS11-206ENST00000614944 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
VPS11-206ENST00000614944 KIAA1210Q9ULL0 1709 aa12.3□□□□□ -0.44
VPS11-206ENST00000614944 SPATA31E1Q6ZUB1 1445 aa12.3□□□□□ -0.44
VPS11-206ENST00000614944 SPATA31D1Q6ZQQ2 1576 aa12.29□□□□□ -0.44
VPS11-206ENST00000614944 ADGRB3O60242 1522 aa12.29□□□□□ -0.44
VPS11-206ENST00000614944 NPATQ14207 1427 aa12.29□□□□□ -0.44
VPS11-206ENST00000614944 SIN3AQ96ST3 1273 aa12.29□□□□□ -0.44
VPS11-206ENST00000614944 CLTCQ00610 1675 aaKnown RBP12.27□□□□□ -0.44
VPS11-206ENST00000614944 SYNMO15061 1565 aa12.27□□□□□ -0.44
VPS11-206ENST00000614944 MYOM2P54296 1465 aa12.27□□□□□ -0.45
VPS11-206ENST00000614944 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
VPS11-206ENST00000614944 TRPM1Q7Z4N2 1603 aa12.25□□□□□ -0.45
VPS11-206ENST00000614944 NRXN1Q9ULB1 1477 aa12.24□□□□□ -0.45
VPS11-206ENST00000614944 POLR1AO95602 1720 aaPredicted RBP12.24□□□□□ -0.45
VPS11-206ENST00000614944 PPLO60437 1756 aa12.24□□□□□ -0.45
VPS11-206ENST00000614944 MADDQ8WXG6 1647 aa12.23□□□□□ -0.45
VPS11-206ENST00000614944 ERVK-7P63135 1459 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms