RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
CBWD3-210ENST00000614398 IQGAP3Q86VI3 1631 aa9.37□□□□□ -0.91
CBWD3-210ENST00000614398 MROH1Q8NDA8 1641 aa9.36□□□□□ -0.91
CBWD3-210ENST00000614398 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
CBWD3-210ENST00000614398 ZC3H13Q5T200 1668 aaKnown RBP9.35□□□□□ -0.91
CBWD3-210ENST00000614398 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
CBWD3-210ENST00000614398 LMTK2Q8IWU2 1503 aa9.35□□□□□ -0.91
CBWD3-210ENST00000614398 YEATS2Q9ULM3 1422 aa9.34□□□□□ -0.91
CBWD3-210ENST00000614398 RAPGEF3O95398 923 aa9.33□□□□□ -0.92
CBWD3-210ENST00000614398 SIGLEC1Q9BZZ2 1709 aa9.32□□□□□ -0.92
CBWD3-210ENST00000614398 TET3O43151 1660 aa9.32□□□□□ -0.92
CBWD3-210ENST00000614398 ITGAEP38570 1179 aa9.32□□□□□ -0.92
CBWD3-210ENST00000614398 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
CBWD3-210ENST00000614398 PZPP20742 1482 aa9.31□□□□□ -0.92
CBWD3-210ENST00000614398 RRP7BPQ9NSQ0 103 aa9.31□□□□□ -0.92
CBWD3-210ENST00000614398 CLSPNQ9HAW4 1339 aa9.3□□□□□ -0.92
CBWD3-210ENST00000614398 FOXD1Q16676 465 aa9.3□□□□□ -0.92
CBWD3-210ENST00000614398 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
CBWD3-210ENST00000614398 MROH2AA6NES4 1674 aa9.29□□□□□ -0.92
CBWD3-210ENST00000614398 EFCAB6Q5THR3 1501 aa9.28□□□□□ -0.92
CBWD3-210ENST00000614398 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
CBWD3-210ENST00000614398 ABCC3O15438 1527 aa9.28□□□□□ -0.92
CBWD3-210ENST00000614398 RPRD2Q5VT52 1461 aaKnown RBP9.27□□□□□ -0.93
CBWD3-210ENST00000614398 CAMSAP1Q5T5Y3 1602 aa9.27□□□□□ -0.93
CBWD3-210ENST00000614398 ARHGAP31Q2M1Z3 1444 aa9.27□□□□□ -0.93
CBWD3-210ENST00000614398 CEP152O94986 1710 aa9.27□□□□□ -0.93
CBWD3-210ENST00000614398 E9PCH4 1651 aa9.26□□□□□ -0.93
CBWD3-210ENST00000614398 KANK1Q14678 1352 aa9.26□□□□□ -0.93
CBWD3-210ENST00000614398 NEURL4Q96JN8 1562 aa9.25□□□□□ -0.93
CBWD3-210ENST00000614398 CNTLNQ9NXG0 1405 aa9.25□□□□□ -0.93
CBWD3-210ENST00000614398 ADAMTSL3P82987 1691 aa9.24□□□□□ -0.93
CBWD3-210ENST00000614398 SPHKAPQ2M3C7 1700 aa9.23□□□□□ -0.93
CBWD3-210ENST00000614398 NUP155O75694 1391 aa9.23□□□□□ -0.93
CBWD3-210ENST00000614398 PTPRTO14522 1441 aa9.23□□□□□ -0.93
CBWD3-210ENST00000614398 TRPM2O94759 1503 aa9.23□□□□□ -0.93
CBWD3-210ENST00000614398 FER1L4A9Z1Z3 1794 aa9.22□□□□□ -0.93
CBWD3-210ENST00000614398 KIF3BO15066 747 aa9.22□□□□□ -0.93
CBWD3-210ENST00000614398 CLTCQ00610 1675 aaKnown RBP9.22□□□□□ -0.93
CBWD3-210ENST00000614398 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.93
CBWD3-210ENST00000614398 MPHOSPH9Q99550 1183 aa9.21□□□□□ -0.94
CBWD3-210ENST00000614398 PIK3C2BO00750 1634 aa9.21□□□□□ -0.94
CBWD3-210ENST00000614398 PREX1Q8TCU6 1659 aa9.2□□□□□ -0.94
CBWD3-210ENST00000614398 SPATA31D1Q6ZQQ2 1576 aa9.2□□□□□ -0.94
CBWD3-210ENST00000614398 ANKRD30BQ9BXX2 1392 aa9.2□□□□□ -0.94
CBWD3-210ENST00000614398 KDM5AP29375 1690 aaKnown RBP9.2□□□□□ -0.94
CBWD3-210ENST00000614398 NOS1P29475 1434 aa9.19□□□□□ -0.94
CBWD3-210ENST00000614398 NPATQ14207 1427 aa9.18□□□□□ -0.94
CBWD3-210ENST00000614398 PLA2R1Q13018 1463 aa9.18□□□□□ -0.94
CBWD3-210ENST00000614398 TRIM52Q96A61 297 aa9.18□□□□□ -0.94
CBWD3-210ENST00000614398 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
CBWD3-210ENST00000614398 C3P01024 1663 aa9.17□□□□□ -0.94
CBWD3-210ENST00000614398 MADDQ8WXG6 1647 aa9.17□□□□□ -0.94
CBWD3-210ENST00000614398 ERVK-7P63135 1459 aa9.17□□□□□ -0.94
CBWD3-210ENST00000614398 SYNMO15061 1565 aa9.17□□□□□ -0.94
CBWD3-210ENST00000614398 CLTCL1P53675 1640 aa9.16□□□□□ -0.94
CBWD3-210ENST00000614398 PKD2Q13563 968 aa9.16□□□□□ -0.94
CBWD3-210ENST00000614398 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
CBWD3-210ENST00000614398 WASHC2CQ9Y4E1 1318 aa9.15□□□□□ -0.94
CBWD3-210ENST00000614398 RIMS1Q86UR5 1692 aaKnown RBP9.14□□□□□ -0.95
CBWD3-210ENST00000614398 ADGRB3O60242 1522 aa9.14□□□□□ -0.95
CBWD3-210ENST00000614398 KIF1BO60333 1816 aa9.14□□□□□ -0.95
CBWD3-210ENST00000614398 GGT6Q6P531 493 aa9.14□□□□□ -0.95
CBWD3-210ENST00000614398 IFT172Q9UG01 1749 aa9.13□□□□□ -0.95
CBWD3-210ENST00000614398 CCER1Q8TC90 406 aaPredicted RBP9.13□□□□□ -0.95
CBWD3-210ENST00000614398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.13□□□□□ -0.95
CBWD3-210ENST00000614398 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
CBWD3-210ENST00000614398 ZEB1P37275 1124 aaPredicted RBP9.13□□□□□ -0.95
CBWD3-210ENST00000614398 ZMYM3Q14202 1370 aa9.12□□□□□ -0.95
CBWD3-210ENST00000614398 CCDC144AA2RUR9 1427 aa9.12□□□□□ -0.95
CBWD3-210ENST00000614398 SPATA31E1Q6ZUB1 1445 aa9.12□□□□□ -0.95
CBWD3-210ENST00000614398 NLRP1Q9C000 1473 aa9.12□□□□□ -0.95
CBWD3-210ENST00000614398 TMEM131LA2VDJ0 1609 aa9.11□□□□□ -0.95
CBWD3-210ENST00000614398 ARID4BQ4LE39 1312 aaPredicted RBP9.11□□□□□ -0.95
CBWD3-210ENST00000614398 MYO3AQ8NEV4 1616 aa9.1□□□□□ -0.95
CBWD3-210ENST00000614398 SLC52A1Q9NWF4 448 aa9.1□□□□□ -0.95
CBWD3-210ENST00000614398 PPLO60437 1756 aa9.09□□□□□ -0.95
CBWD3-210ENST00000614398 MYOM2P54296 1465 aa9.09□□□□□ -0.95
CBWD3-210ENST00000614398 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
CBWD3-210ENST00000614398 UBR1Q8IWV7 1749 aa9.08□□□□□ -0.96
CBWD3-210ENST00000614398 PTPRMP28827 1452 aa9.08□□□□□ -0.96
CBWD3-210ENST00000614398 ESF1Q9H501 851 aaKnown RBP9.08□□□□□ -0.96
CBWD3-210ENST00000614398 UHRF1BP1Q6BDS2 1440 aa9.08□□□□□ -0.96
CBWD3-210ENST00000614398 TNRQ92752 1358 aa9.08□□□□□ -0.96
CBWD3-210ENST00000614398 UGGT1Q9NYU2 1555 aa9.07□□□□□ -0.96
CBWD3-210ENST00000614398 KIAA1210Q9ULL0 1709 aa9.07□□□□□ -0.96
CBWD3-210ENST00000614398 NRXN1Q9ULB1 1477 aa9.07□□□□□ -0.96
CBWD3-210ENST00000614398 SETD1BQ9UPS6 1966 aaKnown RBP9.07□□□□□ -0.96
CBWD3-210ENST00000614398 A2ML1A8K2U0 1454 aa9.07□□□□□ -0.96
CBWD3-210ENST00000614398 ZFYVE9O95405 1425 aa9.06□□□□□ -0.96
CBWD3-210ENST00000614398 NEXMIFQ5QGS0 1516 aa9.06□□□□□ -0.96
CBWD3-210ENST00000614398 RPGRIP1LQ68CZ1 1315 aa9.06□□□□□ -0.96
CBWD3-210ENST00000614398 MYO5BQ9ULV0 1848 aa9.06□□□□□ -0.96
CBWD3-210ENST00000614398 LAMC1P11047 1609 aa9.05□□□□□ -0.96
CBWD3-210ENST00000614398 CFAP65Q6ZU64 1925 aaKnown RBP9.05□□□□□ -0.96
CBWD3-210ENST00000614398 MLECQ14165 292 aa9.05□□□□□ -0.96
CBWD3-210ENST00000614398 CEP170BQ9Y4F5 1589 aaPredicted RBP9.05□□□□□ -0.96
CBWD3-210ENST00000614398 SLIT1O75093 1534 aa9.05□□□□□ -0.96
CBWD3-210ENST00000614398 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
CBWD3-210ENST00000614398 TONSLQ96HA7 1378 aa9.04□□□□□ -0.96
CBWD3-210ENST00000614398 SIN3AQ96ST3 1273 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms