RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 TNRQ92752 1358 aa20.91■□□□□ 0.94
PTPN20CP-201ENST00000614090 GPATCH8Q9UKJ3 1502 aaKnown RBP20.9■□□□□ 0.94
PTPN20CP-201ENST00000614090 CASKIN1Q8WXD9 1431 aa20.9■□□□□ 0.94
PTPN20CP-201ENST00000614090 RGS17Q9UGC6 210 aaPredicted RBP20.9■□□□□ 0.94
PTPN20CP-201ENST00000614090 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.93
PTPN20CP-201ENST00000614090 FAM135AQ9P2D6 1515 aa20.88■□□□□ 0.93
PTPN20CP-201ENST00000614090 NPHP4O75161 1426 aaPredicted RBP20.88■□□□□ 0.93
PTPN20CP-201ENST00000614090 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
PTPN20CP-201ENST00000614090 ANKLE2Q86XL3 938 aa20.88■□□□□ 0.93
PTPN20CP-201ENST00000614090 PZPP20742 1482 aa20.88■□□□□ 0.93
PTPN20CP-201ENST00000614090 LRRC7Q96NW7 1537 aa20.87■□□□□ 0.93
PTPN20CP-201ENST00000614090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.86■□□□□ 0.93
PTPN20CP-201ENST00000614090 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
PTPN20CP-201ENST00000614090 KDM5DQ9BY66 1539 aa20.84■□□□□ 0.93
PTPN20CP-201ENST00000614090 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
PTPN20CP-201ENST00000614090 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
PTPN20CP-201ENST00000614090 THEMISQ8N1K5 641 aaPredicted RBP20.82■□□□□ 0.92
PTPN20CP-201ENST00000614090 FBXO31Q5XUX0 539 aaPredicted RBP20.81■□□□□ 0.92
PTPN20CP-201ENST00000614090 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
PTPN20CP-201ENST00000614090 ZC3H13Q5T200 1668 aaKnown RBP20.78■□□□□ 0.92
PTPN20CP-201ENST00000614090 CFDP1Q9UEE9 299 aaPredicted RBP20.78■□□□□ 0.92
PTPN20CP-201ENST00000614090 MIA2Q96PC5 1412 aa20.78■□□□□ 0.92
PTPN20CP-201ENST00000614090 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
PTPN20CP-201ENST00000614090 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
PTPN20CP-201ENST00000614090 XIRP1Q702N8 1843 aaKnown RBP20.76■□□□□ 0.91
PTPN20CP-201ENST00000614090 SETD1AO15047 1707 aaKnown RBP20.76■□□□□ 0.91
PTPN20CP-201ENST00000614090 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
PTPN20CP-201ENST00000614090 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
PTPN20CP-201ENST00000614090 POTEAQ6S8J7 498 aa20.74■□□□□ 0.91
PTPN20CP-201ENST00000614090 MBD5Q9P267 1494 aa20.72■□□□□ 0.91
PTPN20CP-201ENST00000614090 KIF3BO15066 747 aa20.69■□□□□ 0.9
PTPN20CP-201ENST00000614090 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
PTPN20CP-201ENST00000614090 FAM135BQ49AJ0 1406 aa20.68■□□□□ 0.9
PTPN20CP-201ENST00000614090 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
PTPN20CP-201ENST00000614090 UBR1Q8IWV7 1749 aa20.65■□□□□ 0.9
PTPN20CP-201ENST00000614090 SCAF11Q99590 1463 aaKnown RBP20.63■□□□□ 0.89
PTPN20CP-201ENST00000614090 ZNF644Q9H582 1327 aaPredicted RBP20.63■□□□□ 0.89
PTPN20CP-201ENST00000614090 ROBO1Q9Y6N7 1651 aa20.63■□□□□ 0.89
PTPN20CP-201ENST00000614090 CCDC141Q6ZP82 1450 aa20.62■□□□□ 0.89
PTPN20CP-201ENST00000614090 ERVK-7P63135 1459 aa20.6■□□□□ 0.89
PTPN20CP-201ENST00000614090 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
PTPN20CP-201ENST00000614090 ABCC3O15438 1527 aa20.58■□□□□ 0.89
PTPN20CP-201ENST00000614090 SLIT1O75093 1534 aa20.58■□□□□ 0.88
PTPN20CP-201ENST00000614090 ARHGAP23Q9P227 1491 aa20.57■□□□□ 0.88
PTPN20CP-201ENST00000614090 CFAP65Q6ZU64 1925 aaKnown RBP20.57■□□□□ 0.88
PTPN20CP-201ENST00000614090 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
PTPN20CP-201ENST00000614090 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
PTPN20CP-201ENST00000614090 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
PTPN20CP-201ENST00000614090 NCOA2Q15596 1464 aa20.55■□□□□ 0.88
PTPN20CP-201ENST00000614090 PHLPP1O60346 1717 aa20.53■□□□□ 0.88
PTPN20CP-201ENST00000614090 CAMSAP2Q08AD1 1489 aa20.52■□□□□ 0.88
PTPN20CP-201ENST00000614090 CEP152O94986 1710 aa20.52■□□□□ 0.88
PTPN20CP-201ENST00000614090 EIF2AK4Q9P2K8 1649 aaKnown RBP20.52■□□□□ 0.88
PTPN20CP-201ENST00000614090 MAP3K1Q13233 1512 aa20.52■□□□□ 0.87
PTPN20CP-201ENST00000614090 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
PTPN20CP-201ENST00000614090 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
PTPN20CP-201ENST00000614090 LTKP29376 864 aa20.5■□□□□ 0.87
PTPN20CP-201ENST00000614090 UPF1Q92900 1129 aaKnown RBP eCLIP20.5■□□□□ 0.87
PTPN20CP-201ENST00000614090 ARHGEF5Q12774 1597 aa20.5■□□□□ 0.87
PTPN20CP-201ENST00000614090 RSPH4AQ5TD94 716 aa20.49■□□□□ 0.87
PTPN20CP-201ENST00000614090 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
PTPN20CP-201ENST00000614090 TXNDC2Q86VQ3 553 aa20.48■□□□□ 0.87
PTPN20CP-201ENST00000614090 JCADQ9P266 1359 aa20.47■□□□□ 0.87
PTPN20CP-201ENST00000614090 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
PTPN20CP-201ENST00000614090 PRDM15P57071 1507 aaPredicted RBP20.43■□□□□ 0.86
PTPN20CP-201ENST00000614090 COL16A1Q07092 1604 aaPredicted RBP20.43■□□□□ 0.86
PTPN20CP-201ENST00000614090 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
PTPN20CP-201ENST00000614090 NWD1Q149M9 1564 aa20.42■□□□□ 0.86
PTPN20CP-201ENST00000614090 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
PTPN20CP-201ENST00000614090 PIK3C2BO00750 1634 aa20.42■□□□□ 0.86
PTPN20CP-201ENST00000614090 KDM5AP29375 1690 aaKnown RBP20.42■□□□□ 0.86
PTPN20CP-201ENST00000614090 LRP6O75581 1613 aa20.4■□□□□ 0.86
PTPN20CP-201ENST00000614090 KCNA6P17658 529 aa20.4■□□□□ 0.86
PTPN20CP-201ENST00000614090 SRCAPQ6ZRS2 3230 aa20.39■□□□□ 0.85
PTPN20CP-201ENST00000614090 TMEM2Q9UHN6 1383 aa20.39■□□□□ 0.85
PTPN20CP-201ENST00000614090 TSPY4P0CV99 314 aa20.39■□□□□ 0.85
PTPN20CP-201ENST00000614090 TSPY10P0CW01 314 aa20.39■□□□□ 0.85
PTPN20CP-201ENST00000614090 ZNF772Q68DY9 489 aaPredicted RBP20.39■□□□□ 0.85
PTPN20CP-201ENST00000614090 ARHGAP31Q2M1Z3 1444 aa20.38■□□□□ 0.85
PTPN20CP-201ENST00000614090 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
PTPN20CP-201ENST00000614090 TET3O43151 1660 aa20.38■□□□□ 0.85
PTPN20CP-201ENST00000614090 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
PTPN20CP-201ENST00000614090 MSH6P52701 1360 aa20.37■□□□□ 0.85
PTPN20CP-201ENST00000614090 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
PTPN20CP-201ENST00000614090 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
PTPN20CP-201ENST00000614090 SHPRHQ149N8 1683 aa20.36■□□□□ 0.85
PTPN20CP-201ENST00000614090 SPATA31A6Q5VVP1 1343 aa20.36■□□□□ 0.85
PTPN20CP-201ENST00000614090 EFCAB6Q5THR3 1501 aa20.35■□□□□ 0.85
PTPN20CP-201ENST00000614090 SLAIN2Q9P270 581 aa20.33■□□□□ 0.85
PTPN20CP-201ENST00000614090 MEX3CQ5U5Q3 659 aaKnown RBP20.32■□□□□ 0.84
PTPN20CP-201ENST00000614090 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
PTPN20CP-201ENST00000614090 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
PTPN20CP-201ENST00000614090 AHDC1Q5TGY3 1603 aaPredicted RBP20.3■□□□□ 0.84
PTPN20CP-201ENST00000614090 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
PTPN20CP-201ENST00000614090 RXRBP28702 533 aa20.28■□□□□ 0.84
PTPN20CP-201ENST00000614090 SLC26A8Q96RN1 970 aa20.28■□□□□ 0.84
PTPN20CP-201ENST00000614090 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
PTPN20CP-201ENST00000614090 ADGRB3O60242 1522 aa20.24■□□□□ 0.83
PTPN20CP-201ENST00000614090 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
PTPN20CP-201ENST00000614090 ERBINQ96RT1 1412 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms