RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CROCC2H7BZ55 1655 aa35.55■■■■□ 3.28
FAM228B-208ENST00000613899 EIF2AK4Q9P2K8 1649 aaKnown RBP35.54■■■■□ 3.28
FAM228B-208ENST00000613899 RNF17Q9BXT8 1623 aaKnown RBP35.54■■■■□ 3.28
FAM228B-208ENST00000613899 NCOA1Q15788 1441 aa35.52■■■■□ 3.28
FAM228B-208ENST00000613899 SHANK2Q9UPX8 1470 aa35.52■■■■□ 3.28
FAM228B-208ENST00000613899 CEP170BQ9Y4F5 1589 aaPredicted RBP35.51■■■■□ 3.28
FAM228B-208ENST00000613899 FGD6Q6ZV73 1430 aa35.51■■■■□ 3.28
FAM228B-208ENST00000613899 CAMSAP1Q5T5Y3 1602 aa35.5■■■■□ 3.27
FAM228B-208ENST00000613899 PTPRTO14522 1441 aa35.49■■■■□ 3.27
FAM228B-208ENST00000613899 PZPP20742 1482 aa35.48■■■■□ 3.27
FAM228B-208ENST00000613899 WASHC2CQ9Y4E1 1318 aa35.48■■■■□ 3.27
FAM228B-208ENST00000613899 TCOF1Q13428 1488 aaKnown RBP35.48■■■■□ 3.27
FAM228B-208ENST00000613899 DUOX2Q9NRD8 1548 aa35.47■■■■□ 3.27
FAM228B-208ENST00000613899 DNMT1P26358 1616 aaKnown RBP35.46■■■■□ 3.27
FAM228B-208ENST00000613899 ZC3H13Q5T200 1668 aaKnown RBP35.46■■■■□ 3.27
FAM228B-208ENST00000613899 ABCC5O15440 1437 aa35.44■■■■□ 3.26
FAM228B-208ENST00000613899 PLA2R1Q13018 1463 aa35.42■■■■□ 3.26
FAM228B-208ENST00000613899 DAPK1P53355 1430 aa35.42■■■■□ 3.26
FAM228B-208ENST00000613899 A2ML1A8K2U0 1454 aa35.41■■■■□ 3.26
FAM228B-208ENST00000613899 CERKQ8TCT0 537 aa35.4■■■■□ 3.26
FAM228B-208ENST00000613899 TNRQ92752 1358 aa35.38■■■■□ 3.26
FAM228B-208ENST00000613899 KIF15Q9NS87 1388 aa35.38■■■■□ 3.26
FAM228B-208ENST00000613899 ABCC3O15438 1527 aa35.37■■■■□ 3.25
FAM228B-208ENST00000613899 MROH1Q8NDA8 1641 aa35.37■■■■□ 3.25
FAM228B-208ENST00000613899 ERBINQ96RT1 1412 aa35.35■■■■□ 3.25
FAM228B-208ENST00000613899 FBXO31Q5XUX0 539 aaPredicted RBP35.33■■■■□ 3.25
FAM228B-208ENST00000613899 CEP152O94986 1710 aa35.3■■■■□ 3.24
FAM228B-208ENST00000613899 PKD2Q13563 968 aa35.3■■■■□ 3.24
FAM228B-208ENST00000613899 PRDM15P57071 1507 aaPredicted RBP35.3■■■■□ 3.24
FAM228B-208ENST00000613899 NLRP1Q9C000 1473 aa35.28■■■■□ 3.24
FAM228B-208ENST00000613899 RRP7BPQ9NSQ0 103 aa35.27■■■■□ 3.24
FAM228B-208ENST00000613899 NCKAP5LQ9HCH0 1330 aa35.27■■■■□ 3.24
FAM228B-208ENST00000613899 ANKRD30AQ9BXX3 1397 aa35.26■■■■□ 3.24
FAM228B-208ENST00000613899 SPATA31D1Q6ZQQ2 1576 aa35.25■■■■□ 3.23
FAM228B-208ENST00000613899 DEPDC5O75140 1603 aa35.24■■■■□ 3.23
FAM228B-208ENST00000613899 LTBP4Q8N2S1 1624 aa35.21■■■■□ 3.23
FAM228B-208ENST00000613899 POLR1AO95602 1720 aaPredicted RBP35.21■■■■□ 3.23
FAM228B-208ENST00000613899 ERVK-7P63135 1459 aa35.2■■■■□ 3.23
FAM228B-208ENST00000613899 ADGRL2O95490 1459 aa35.19■■■■□ 3.22
FAM228B-208ENST00000613899 UGGT1Q9NYU2 1555 aa35.18■■■■□ 3.22
FAM228B-208ENST00000613899 CHIC2Q9UKJ5 165 aa35.18■■■■□ 3.22
FAM228B-208ENST00000613899 FAM50AQ14320 339 aaKnown RBP35.17■■■■□ 3.22
FAM228B-208ENST00000613899 ARHGAP31Q2M1Z3 1444 aa35.14■■■■□ 3.22
FAM228B-208ENST00000613899 KANK1Q14678 1352 aa35.13■■■■□ 3.21
FAM228B-208ENST00000613899 IQSEC2Q5JU85 1478 aa35.12■■■■□ 3.21
FAM228B-208ENST00000613899 THEMISQ8N1K5 641 aaPredicted RBP35.11■■■■□ 3.21
FAM228B-208ENST00000613899 NEURL4Q96JN8 1562 aa35.11■■■■□ 3.21
FAM228B-208ENST00000613899 CFAP65Q6ZU64 1925 aaKnown RBP35.1■■■■□ 3.21
FAM228B-208ENST00000613899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.09■■■■□ 3.21
FAM228B-208ENST00000613899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.08■■■■□ 3.21
FAM228B-208ENST00000613899 ZNF335Q9H4Z2 1342 aaPredicted RBP35.06■■■■□ 3.2
FAM228B-208ENST00000613899 LMTK2Q8IWU2 1503 aa35.06■■■■□ 3.2
FAM228B-208ENST00000613899 VWDEQ8N2E2 1590 aa35.06■■■■□ 3.2
FAM228B-208ENST00000613899 ANKLE2Q86XL3 938 aa35.04■■■■□ 3.2
FAM228B-208ENST00000613899 UBR1Q8IWV7 1749 aa35.01■■■■□ 3.2
FAM228B-208ENST00000613899 ANKRD50Q9ULJ7 1429 aa35■■■■□ 3.19
FAM228B-208ENST00000613899 MED14O60244 1454 aa34.99■■■■□ 3.19
FAM228B-208ENST00000613899 EFCAB6Q5THR3 1501 aa34.96■■■■□ 3.19
FAM228B-208ENST00000613899 NPHP4O75161 1426 aaPredicted RBP34.95■■■■□ 3.19
FAM228B-208ENST00000613899 IQGAP1P46940 1657 aa34.95■■■■□ 3.18
FAM228B-208ENST00000613899 ROCK1Q13464 1354 aa34.91■■■■□ 3.18
FAM228B-208ENST00000613899 PIK3C2BO00750 1634 aa34.89■■■■□ 3.18
FAM228B-208ENST00000613899 CPS1P31327 1500 aa34.89■■■■□ 3.18
FAM228B-208ENST00000613899 SLIT1O75093 1534 aa34.87■■■■□ 3.17
FAM228B-208ENST00000613899 KDM5AP29375 1690 aaKnown RBP34.87■■■■□ 3.17
FAM228B-208ENST00000613899 UNC13BO14795 1591 aa34.87■■■■□ 3.17
FAM228B-208ENST00000613899 SCAF11Q99590 1463 aaKnown RBP34.85■■■■□ 3.17
FAM228B-208ENST00000613899 ARHGAP23Q9P227 1491 aa34.85■■■■□ 3.17
FAM228B-208ENST00000613899 TET3O43151 1660 aa34.85■■■■□ 3.17
FAM228B-208ENST00000613899 RPRD2Q5VT52 1461 aaKnown RBP34.84■■■■□ 3.17
FAM228B-208ENST00000613899 SYNMO15061 1565 aa34.84■■■■□ 3.17
FAM228B-208ENST00000613899 PPARGC1BQ86YN6 1023 aaKnown RBP34.84■■■■□ 3.17
FAM228B-208ENST00000613899 NOS1P29475 1434 aa34.83■■■■□ 3.17
FAM228B-208ENST00000613899 GCC2Q8IWJ2 1684 aa34.8■■■■□ 3.16
FAM228B-208ENST00000613899 STAG3Q9UJ98 1225 aa34.78■■■■□ 3.16
FAM228B-208ENST00000613899 ADGRB3O60242 1522 aa34.75■■■■□ 3.15
FAM228B-208ENST00000613899 TMEM2Q9UHN6 1383 aa34.74■■■■□ 3.15
FAM228B-208ENST00000613899 ITGAEP38570 1179 aa34.74■■■■□ 3.15
FAM228B-208ENST00000613899 EID1Q9Y6B2 187 aa34.74■■■■□ 3.15
FAM228B-208ENST00000613899 UBAP1LF5GYI3 381 aa34.73■■■■□ 3.15
FAM228B-208ENST00000613899 IDI1Q13907 227 aa34.73■■■■□ 3.15
FAM228B-208ENST00000613899 TXNDC2Q86VQ3 553 aa34.73■■■■□ 3.15
FAM228B-208ENST00000613899 IQGAP3Q86VI3 1631 aa34.73■■■■□ 3.15
FAM228B-208ENST00000613899 LTKP29376 864 aa34.71■■■■□ 3.15
FAM228B-208ENST00000613899 SLC52A1Q9NWF4 448 aa34.71■■■■□ 3.15
FAM228B-208ENST00000613899 RRBP1Q9P2E9 1410 aaKnown RBP34.7■■■■□ 3.15
FAM228B-208ENST00000613899 STRCP1A6NGW2 1772 aa34.67■■■■□ 3.14
FAM228B-208ENST00000613899 E9PCH4 1651 aa34.66■■■■□ 3.14
FAM228B-208ENST00000613899 NUP155O75694 1391 aa34.6■■■■□ 3.13
FAM228B-208ENST00000613899 LRRC7Q96NW7 1537 aa34.58■■■■□ 3.13
FAM228B-208ENST00000613899 MYO5BQ9ULV0 1848 aa34.58■■■■□ 3.13
FAM228B-208ENST00000613899 TOM1O60784 492 aa34.57■■■■□ 3.12
FAM228B-208ENST00000613899 TMEM131LA2VDJ0 1609 aa34.55■■■■□ 3.12
FAM228B-208ENST00000613899 ZFYVE9O95405 1425 aa34.49■■■■□ 3.11
FAM228B-208ENST00000613899 SCAF1Q9H7N4 1312 aaKnown RBP34.49■■■■□ 3.11
FAM228B-208ENST00000613899 PIP4K2BP78356 416 aa34.46■■■■□ 3.11
FAM228B-208ENST00000613899 NAIPQ13075 1403 aa34.46■■■■□ 3.11
FAM228B-208ENST00000613899 RIMS2Q9UQ26 1411 aa34.46■■■■□ 3.11
FAM228B-208ENST00000613899 ALKQ9UM73 1620 aa34.45■■■■□ 3.11
FAM228B-208ENST00000613899 HDGFP51858 240 aaKnown RBP34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms