RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.31□□□□□ -0.76
ALMS1-206ENST00000613296 NEFHP12036 1026 aa10.3□□□□□ -0.76
ALMS1-206ENST00000613296 MYO6Q9UM54 1294 aa10.3□□□□□ -0.76
ALMS1-206ENST00000613296 TSPYL1Q9H0U9 437 aa10.3□□□□□ -0.76
ALMS1-206ENST00000613296 CAGE1Q8TC20 777 aa10.3□□□□□ -0.76
ALMS1-206ENST00000613296 HSP90AB2PQ58FF8 381 aa10.3□□□□□ -0.76
ALMS1-206ENST00000613296 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
ALMS1-206ENST00000613296 MCTP1Q6DN14 999 aa10.29□□□□□ -0.76
ALMS1-206ENST00000613296 CCDC66A2RUB6 948 aa10.29□□□□□ -0.76
ALMS1-206ENST00000613296 CCDC173Q0VFZ6 552 aa10.29□□□□□ -0.76
ALMS1-206ENST00000613296 TIMELESSQ9UNS1 1208 aa10.29□□□□□ -0.76
ALMS1-206ENST00000613296 MNS1Q8NEH6 495 aa10.29□□□□□ -0.76
ALMS1-206ENST00000613296 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
ALMS1-206ENST00000613296 HOOK1Q9UJC3 728 aaKnown RBP10.28□□□□□ -0.76
ALMS1-206ENST00000613296 GOLGA6L7A0A1B0GV03 622 aa10.27□□□□□ -0.76
ALMS1-206ENST00000613296 FRAT2O75474 233 aaPredicted RBP10.27□□□□□ -0.77
ALMS1-206ENST00000613296 IPO9Q96P70 1041 aaKnown RBP10.27□□□□□ -0.77
ALMS1-206ENST00000613296 IFT57Q9NWB7 429 aa10.27□□□□□ -0.77
ALMS1-206ENST00000613296 SPAG9O60271 1321 aaKnown RBP10.27□□□□□ -0.77
ALMS1-206ENST00000613296 SKOR2Q2VWA4 1001 aaPredicted RBP10.26□□□□□ -0.77
ALMS1-206ENST00000613296 STK31Q9BXU1 1019 aa10.26□□□□□ -0.77
ALMS1-206ENST00000613296 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
ALMS1-206ENST00000613296 MORC1Q86VD1 984 aa10.26□□□□□ -0.77
ALMS1-206ENST00000613296 RAD21O60216 631 aa10.26□□□□□ -0.77
ALMS1-206ENST00000613296 ZFYVE27Q5T4F4 411 aa10.26□□□□□ -0.77
ALMS1-206ENST00000613296 PAF1Q8N7H5 531 aa10.26□□□□□ -0.77
ALMS1-206ENST00000613296 CTDP1Q9Y5B0 961 aaPredicted RBP10.26□□□□□ -0.77
ALMS1-206ENST00000613296 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
ALMS1-206ENST00000613296 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
ALMS1-206ENST00000613296 ENOX2Q16206 610 aaKnown RBP10.25□□□□□ -0.77
ALMS1-206ENST00000613296 DDX49Q9Y6V7 483 aaKnown RBP10.25□□□□□ -0.77
ALMS1-206ENST00000613296 PKNOX2Q96KN3 472 aa10.25□□□□□ -0.77
ALMS1-206ENST00000613296 KTN1Q86UP2 1357 aaKnown RBP10.25□□□□□ -0.77
ALMS1-206ENST00000613296 KIAA0754O94854 1291 aa10.25□□□□□ -0.77
ALMS1-206ENST00000613296 AXDND1Q5T1B0 1012 aaPredicted RBP10.25□□□□□ -0.77
ALMS1-206ENST00000613296 LEKR1Q6ZMV7 388 aa10.25□□□□□ -0.77
ALMS1-206ENST00000613296 EZRP15311 586 aaKnown RBP10.25□□□□□ -0.77
ALMS1-206ENST00000613296 CCDC47Q96A33 483 aaKnown RBP10.25□□□□□ -0.77
ALMS1-206ENST00000613296 CCAR1Q8IX12 1150 aaKnown RBP10.25□□□□□ -0.77
ALMS1-206ENST00000613296 TRIM34Q9BYJ4 488 aa10.25□□□□□ -0.77
ALMS1-206ENST00000613296 EPS15P42566 896 aa10.24□□□□□ -0.77
ALMS1-206ENST00000613296 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
ALMS1-206ENST00000613296 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
ALMS1-206ENST00000613296 FAM184AQ8NB25 1140 aa10.24□□□□□ -0.77
ALMS1-206ENST00000613296 HDAC5Q9UQL6 1122 aa10.24□□□□□ -0.77
ALMS1-206ENST00000613296 CHMP4CQ96CF2 233 aa10.24□□□□□ -0.77
ALMS1-206ENST00000613296 RSF1Q96T23 1441 aaPredicted RBP10.23□□□□□ -0.77
ALMS1-206ENST00000613296 CLIP1P30622 1438 aa10.23□□□□□ -0.77
ALMS1-206ENST00000613296 SRPK2P78362 688 aaKnown RBP10.23□□□□□ -0.77
ALMS1-206ENST00000613296 PMFBP1Q8TBY8 1022 aa10.23□□□□□ -0.77
ALMS1-206ENST00000613296 CLASRPQ8N2M8 674 aaKnown RBP10.22□□□□□ -0.77
ALMS1-206ENST00000613296 GOLGA6L10A6NI86 522 aa10.22□□□□□ -0.77
ALMS1-206ENST00000613296 ERCC4Q92889 916 aaPredicted RBP10.22□□□□□ -0.77
ALMS1-206ENST00000613296 MTERF4Q7Z6M4 381 aaKnown RBP10.22□□□□□ -0.77
ALMS1-206ENST00000613296 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
ALMS1-206ENST00000613296 BCCIPQ9P287 314 aaKnown RBP eCLIP10.22□□□□□ -0.77
ALMS1-206ENST00000613296 TRIM29Q14134 588 aa10.22□□□□□ -0.77
ALMS1-206ENST00000613296 TAF3Q5VWG9 929 aa10.22□□□□□ -0.77
ALMS1-206ENST00000613296 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
ALMS1-206ENST00000613296 MSH5O43196 834 aa10.22□□□□□ -0.77
ALMS1-206ENST00000613296 CHMP4AQ9BY43 222 aa10.22□□□□□ -0.77
ALMS1-206ENST00000613296 ANKRD18AQ8IVF6 992 aa10.21□□□□□ -0.77
ALMS1-206ENST00000613296 FBXW7Q969H0 707 aa10.21□□□□□ -0.77
ALMS1-206ENST00000613296 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.78
ALMS1-206ENST00000613296 SKIDA1Q1XH10 827 aa10.21□□□□□ -0.78
ALMS1-206ENST00000613296 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.78
ALMS1-206ENST00000613296 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.78
ALMS1-206ENST00000613296 BCL11BQ9C0K0 894 aaPredicted RBP10.2□□□□□ -0.78
ALMS1-206ENST00000613296 OFD1O75665 1012 aa10.2□□□□□ -0.78
ALMS1-206ENST00000613296 BICD2Q8TD16 824 aa10.2□□□□□ -0.78
ALMS1-206ENST00000613296 FAM43AQ8N2R8 423 aa10.2□□□□□ -0.78
ALMS1-206ENST00000613296 R3HCC1Q9Y3T6 440 aaKnown RBP10.2□□□□□ -0.78
ALMS1-206ENST00000613296 TMF1P82094 1093 aa10.2□□□□□ -0.78
ALMS1-206ENST00000613296 GSE1Q14687 1217 aa10.2□□□□□ -0.78
ALMS1-206ENST00000613296 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
ALMS1-206ENST00000613296 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
ALMS1-206ENST00000613296 ANKRD62A6NC57 917 aa10.19□□□□□ -0.78
ALMS1-206ENST00000613296 STK26Q9P289 416 aa10.19□□□□□ -0.78
ALMS1-206ENST00000613296 RCAN3Q9UKA8 241 aa10.19□□□□□ -0.78
ALMS1-206ENST00000613296 ZCCHC6Q5VYS8 1495 aaKnown RBP10.19□□□□□ -0.78
ALMS1-206ENST00000613296 SMC4Q9NTJ3 1288 aa10.19□□□□□ -0.78
ALMS1-206ENST00000613296 DHX37Q8IY37 1157 aaKnown RBP10.19□□□□□ -0.78
ALMS1-206ENST00000613296 CWC22Q9HCG8 908 aaKnown RBP10.19□□□□□ -0.78
ALMS1-206ENST00000613296 NOL10Q9BSC4 688 aaKnown RBP10.19□□□□□ -0.78
ALMS1-206ENST00000613296 SEPT7Q16181 437 aaKnown RBP10.18□□□□□ -0.78
ALMS1-206ENST00000613296 KANK1Q14678 1352 aa10.18□□□□□ -0.78
ALMS1-206ENST00000613296 CT47B1P0C2W7 299 aaPredicted RBP10.18□□□□□ -0.78
ALMS1-206ENST00000613296 LMOD3Q0VAK6 560 aa10.18□□□□□ -0.78
ALMS1-206ENST00000613296 CPLX1O14810 134 aa10.18□□□□□ -0.78
ALMS1-206ENST00000613296 GIMAP7Q8NHV1 300 aa10.18□□□□□ -0.78
ALMS1-206ENST00000613296 CGNL1Q0VF96 1302 aa10.18□□□□□ -0.78
ALMS1-206ENST00000613296 GTF2E1P29083 439 aaPredicted RBP10.18□□□□□ -0.78
ALMS1-206ENST00000613296 MAPK8IP2Q13387 824 aaPredicted RBP10.18□□□□□ -0.78
ALMS1-206ENST00000613296 NAT10Q9H0A0 1025 aaKnown RBP10.18□□□□□ -0.78
ALMS1-206ENST00000613296 SLC4A10Q6U841 1118 aa10.18□□□□□ -0.78
ALMS1-206ENST00000613296 TTLL5Q6EMB2 1281 aa10.17□□□□□ -0.78
ALMS1-206ENST00000613296 ERLIN2O94905 339 aa10.17□□□□□ -0.78
ALMS1-206ENST00000613296 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.17□□□□□ -0.78
ALMS1-206ENST00000613296 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
ALMS1-206ENST00000613296 PDILTQ8N807 584 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms