RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.62
SEMA6C-209ENST00000613223 ATP10AO60312 1499 aa25.19■■□□□ 1.62
SEMA6C-209ENST00000613223 PLA2R1Q13018 1463 aa25.19■■□□□ 1.62
SEMA6C-209ENST00000613223 EIF2AK4Q9P2K8 1649 aaKnown RBP25.17■■□□□ 1.62
SEMA6C-209ENST00000613223 SPATA31E1Q6ZUB1 1445 aa25.16■■□□□ 1.62
SEMA6C-209ENST00000613223 RIMBP3CA6NJZ7 1639 aa25.16■■□□□ 1.62
SEMA6C-209ENST00000613223 RIMBP3BA6NNM3 1639 aa25.16■■□□□ 1.62
SEMA6C-209ENST00000613223 RIMBP3Q9UFD9 1639 aa25.16■■□□□ 1.62
SEMA6C-209ENST00000613223 KIDINS220Q9ULH0 1771 aa25.15■■□□□ 1.62
SEMA6C-209ENST00000613223 RALGAPBQ86X10 1494 aa25.14■■□□□ 1.61
SEMA6C-209ENST00000613223 POGZQ7Z3K3 1410 aa25.14■■□□□ 1.61
SEMA6C-209ENST00000613223 KDM5CP41229 1560 aa25.14■■□□□ 1.61
SEMA6C-209ENST00000613223 DHX29Q7Z478 1369 aaKnown RBP25.14■■□□□ 1.61
SEMA6C-209ENST00000613223 WASHC2AQ641Q2 1341 aa25.12■■□□□ 1.61
SEMA6C-209ENST00000613223 NEO1Q92859 1461 aa25.12■■□□□ 1.61
SEMA6C-209ENST00000613223 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
SEMA6C-209ENST00000613223 VWDEQ8N2E2 1590 aa25.11■■□□□ 1.61
SEMA6C-209ENST00000613223 ZNF326Q5BKZ1 582 aaKnown RBP25.1■■□□□ 1.61
SEMA6C-209ENST00000613223 E9PCH4 1651 aa25.1■■□□□ 1.61
SEMA6C-209ENST00000613223 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
SEMA6C-209ENST00000613223 PRDM15P57071 1507 aaPredicted RBP25.09■■□□□ 1.61
SEMA6C-209ENST00000613223 TET3O43151 1660 aa25.09■■□□□ 1.61
SEMA6C-209ENST00000613223 KANK1Q14678 1352 aa25.08■■□□□ 1.6
SEMA6C-209ENST00000613223 POLR1AO95602 1720 aaPredicted RBP25.07■■□□□ 1.6
SEMA6C-209ENST00000613223 MLH3Q9UHC1 1453 aa25.07■■□□□ 1.6
SEMA6C-209ENST00000613223 MAP3K4Q9Y6R4 1608 aa25.06■■□□□ 1.6
SEMA6C-209ENST00000613223 DCAF11Q8TEB1 546 aa25.06■■□□□ 1.6
SEMA6C-209ENST00000613223 HECW2Q9P2P5 1572 aa25.06■■□□□ 1.6
SEMA6C-209ENST00000613223 MROH1Q8NDA8 1641 aa25.06■■□□□ 1.6
SEMA6C-209ENST00000613223 ANP32CO43423 234 aa25.05■■□□□ 1.6
SEMA6C-209ENST00000613223 USP47Q96K76 1375 aa25.05■■□□□ 1.6
SEMA6C-209ENST00000613223 GLI2P10070 1586 aa25.05■■□□□ 1.6
SEMA6C-209ENST00000613223 CCDC7Q96M83 1385 aa25.05■■□□□ 1.6
SEMA6C-209ENST00000613223 KIF3BO15066 747 aa25.04■■□□□ 1.6
SEMA6C-209ENST00000613223 TRPM2O94759 1503 aa25.03■■□□□ 1.6
SEMA6C-209ENST00000613223 A2MP01023 1474 aa25.03■■□□□ 1.6
SEMA6C-209ENST00000613223 SPHKAPQ2M3C7 1700 aa25.02■■□□□ 1.6
SEMA6C-209ENST00000613223 KDM2AQ9Y2K7 1162 aa25.02■■□□□ 1.6
SEMA6C-209ENST00000613223 PTPRTO14522 1441 aa25.01■■□□□ 1.59
SEMA6C-209ENST00000613223 PRAG1Q86YV5 1406 aa25.01■■□□□ 1.59
SEMA6C-209ENST00000613223 C11orf95C9JLR9 678 aaPredicted RBP25■■□□□ 1.59
SEMA6C-209ENST00000613223 RNF17Q9BXT8 1623 aaKnown RBP25■■□□□ 1.59
SEMA6C-209ENST00000613223 CNTLNQ9NXG0 1405 aa24.99■■□□□ 1.59
SEMA6C-209ENST00000613223 CCER2I3L3R5 266 aa24.99■■□□□ 1.59
SEMA6C-209ENST00000613223 TRPM1Q7Z4N2 1603 aa24.98■■□□□ 1.59
SEMA6C-209ENST00000613223 FRMPD1Q5SYB0 1578 aa24.97■■□□□ 1.59
SEMA6C-209ENST00000613223 RGL3Q3MIN7 710 aa24.96■■□□□ 1.59
SEMA6C-209ENST00000613223 CARD11Q9BXL7 1154 aa24.96■■□□□ 1.59
SEMA6C-209ENST00000613223 ABCA6Q8N139 1617 aa24.96■■□□□ 1.59
SEMA6C-209ENST00000613223 KIF7Q2M1P5 1343 aa24.95■■□□□ 1.59
SEMA6C-209ENST00000613223 BCORL1Q5H9F3 1711 aa24.95■■□□□ 1.58
SEMA6C-209ENST00000613223 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
SEMA6C-209ENST00000613223 CEP152O94986 1710 aa24.95■■□□□ 1.58
SEMA6C-209ENST00000613223 EFCAB6Q5THR3 1501 aa24.94■■□□□ 1.58
SEMA6C-209ENST00000613223 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
SEMA6C-209ENST00000613223 RICTORQ6R327 1708 aa24.93■■□□□ 1.58
SEMA6C-209ENST00000613223 CLTCL1P53675 1640 aa24.93■■□□□ 1.58
SEMA6C-209ENST00000613223 DIP2BQ9P265 1576 aa24.92■■□□□ 1.58
SEMA6C-209ENST00000613223 LAMC1P11047 1609 aa24.9■■□□□ 1.58
SEMA6C-209ENST00000613223 ARID4BQ4LE39 1312 aaPredicted RBP24.9■■□□□ 1.58
SEMA6C-209ENST00000613223 GPRASP1Q5JY77 1395 aa24.89■■□□□ 1.58
SEMA6C-209ENST00000613223 PPRC1Q5VV67 1664 aaKnown RBP24.89■■□□□ 1.57
SEMA6C-209ENST00000613223 RAPGEF3O95398 923 aa24.89■■□□□ 1.57
SEMA6C-209ENST00000613223 NEURL4Q96JN8 1562 aa24.88■■□□□ 1.57
SEMA6C-209ENST00000613223 DIP2CQ9Y2E4 1556 aa24.88■■□□□ 1.57
SEMA6C-209ENST00000613223 FAM69CQ0P6D2 419 aa24.84■■□□□ 1.57
SEMA6C-209ENST00000613223 STAC3Q96MF2 364 aa24.83■■□□□ 1.57
SEMA6C-209ENST00000613223 MADDQ8WXG6 1647 aa24.82■■□□□ 1.56
SEMA6C-209ENST00000613223 ST20-MTHFSA0A0A6YYL1 179 aa24.8■■□□□ 1.56
SEMA6C-209ENST00000613223 ABCC3O15438 1527 aa24.79■■□□□ 1.56
SEMA6C-209ENST00000613223 ZMYM4Q5VZL5 1548 aa24.79■■□□□ 1.56
SEMA6C-209ENST00000613223 NBPF1Q3BBV0 1214 aa24.79■■□□□ 1.56
SEMA6C-209ENST00000613223 UGGT1Q9NYU2 1555 aa24.77■■□□□ 1.56
SEMA6C-209ENST00000613223 KIF1BO60333 1816 aa24.77■■□□□ 1.56
SEMA6C-209ENST00000613223 GGT6Q6P531 493 aa24.76■■□□□ 1.55
SEMA6C-209ENST00000613223 NPATQ14207 1427 aa24.76■■□□□ 1.55
SEMA6C-209ENST00000613223 YEATS2Q9ULM3 1422 aa24.75■■□□□ 1.55
SEMA6C-209ENST00000613223 CAMSAP1Q5T5Y3 1602 aa24.73■■□□□ 1.55
SEMA6C-209ENST00000613223 TSPOAP1O95153 1857 aa24.73■■□□□ 1.55
SEMA6C-209ENST00000613223 PRKRIP1Q9H875 184 aaPredicted RBP24.73■■□□□ 1.55
SEMA6C-209ENST00000613223 WASHC2CQ9Y4E1 1318 aa24.72■■□□□ 1.55
SEMA6C-209ENST00000613223 ZC3H13Q5T200 1668 aaKnown RBP24.71■■□□□ 1.55
SEMA6C-209ENST00000613223 MYOM2P54296 1465 aa24.71■■□□□ 1.55
SEMA6C-209ENST00000613223 POLR3GLQ9BT43 218 aa24.71■■□□□ 1.55
SEMA6C-209ENST00000613223 KIAA1210Q9ULL0 1709 aa24.69■■□□□ 1.54
SEMA6C-209ENST00000613223 ADGRB3O60242 1522 aa24.69■■□□□ 1.54
SEMA6C-209ENST00000613223 IFT172Q9UG01 1749 aa24.68■■□□□ 1.54
SEMA6C-209ENST00000613223 MROH2AA6NES4 1674 aa24.68■■□□□ 1.54
SEMA6C-209ENST00000613223 IQGAP1P46940 1657 aa24.67■■□□□ 1.54
SEMA6C-209ENST00000613223 COL17A1Q9UMD9 1497 aaPredicted RBP24.66■■□□□ 1.54
SEMA6C-209ENST00000613223 ARHGAP31Q2M1Z3 1444 aa24.65■■□□□ 1.54
SEMA6C-209ENST00000613223 KIF13AQ9H1H9 1805 aa24.64■■□□□ 1.54
SEMA6C-209ENST00000613223 NOS1P29475 1434 aa24.64■■□□□ 1.54
SEMA6C-209ENST00000613223 TESK2Q96S53 571 aa24.63■■□□□ 1.53
SEMA6C-209ENST00000613223 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
SEMA6C-209ENST00000613223 MYT1Q01538 1121 aa24.63■■□□□ 1.53
SEMA6C-209ENST00000613223 SUPT16HQ9Y5B9 1047 aaKnown RBP24.63■■□□□ 1.53
SEMA6C-209ENST00000613223 SIGLEC1Q9BZZ2 1709 aa24.62■■□□□ 1.53
SEMA6C-209ENST00000613223 CFAP65Q6ZU64 1925 aaKnown RBP24.61■■□□□ 1.53
SEMA6C-209ENST00000613223 SCAF11Q99590 1463 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms