RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 CASKIN1Q8WXD9 1431 aa12.68□□□□□ -0.38
SMIM11B-201ENST00000612624 FYCO1Q9BQS8 1478 aa12.67□□□□□ -0.38
SMIM11B-201ENST00000612624 MLH3Q9UHC1 1453 aa12.67□□□□□ -0.38
SMIM11B-201ENST00000612624 EFCAB2Q5VUJ9 269 aa12.67□□□□□ -0.38
SMIM11B-201ENST00000612624 DIP2CQ9Y2E4 1556 aa12.66□□□□□ -0.38
SMIM11B-201ENST00000612624 VPS8Q8N3P4 1428 aa12.65□□□□□ -0.38
SMIM11B-201ENST00000612624 ALKQ9UM73 1620 aa12.65□□□□□ -0.38
SMIM11B-201ENST00000612624 KIF14Q15058 1648 aa12.64□□□□□ -0.39
SMIM11B-201ENST00000612624 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
SMIM11B-201ENST00000612624 ZNF142P52746 1687 aaPredicted RBP12.64□□□□□ -0.39
SMIM11B-201ENST00000612624 ZMYM3Q14202 1370 aa12.63□□□□□ -0.39
SMIM11B-201ENST00000612624 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
SMIM11B-201ENST00000612624 AFAP1Q8N556 730 aa12.61□□□□□ -0.39
SMIM11B-201ENST00000612624 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
SMIM11B-201ENST00000612624 TIAM1Q13009 1591 aa12.6□□□□□ -0.39
SMIM11B-201ENST00000612624 CEP170BQ9Y4F5 1589 aaPredicted RBP12.6□□□□□ -0.39
SMIM11B-201ENST00000612624 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
SMIM11B-201ENST00000612624 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
SMIM11B-201ENST00000612624 POTEAQ6S8J7 498 aa12.58□□□□□ -0.4
SMIM11B-201ENST00000612624 IFNLR1Q8IU57 520 aaPredicted RBP12.58□□□□□ -0.4
SMIM11B-201ENST00000612624 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
SMIM11B-201ENST00000612624 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
SMIM11B-201ENST00000612624 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
SMIM11B-201ENST00000612624 SRCAPQ6ZRS2 3230 aa12.57□□□□□ -0.4
SMIM11B-201ENST00000612624 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
SMIM11B-201ENST00000612624 ABCA6Q8N139 1617 aa12.56□□□□□ -0.4
SMIM11B-201ENST00000612624 MYO3AQ8NEV4 1616 aa12.56□□□□□ -0.4
SMIM11B-201ENST00000612624 A2ML1A8K2U0 1454 aa12.55□□□□□ -0.4
SMIM11B-201ENST00000612624 CDC42BPBQ9Y5S2 1711 aa12.55□□□□□ -0.4
SMIM11B-201ENST00000612624 MYO5CQ9NQX4 1742 aa12.54□□□□□ -0.4
SMIM11B-201ENST00000612624 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
SMIM11B-201ENST00000612624 VWDEQ8N2E2 1590 aa12.54□□□□□ -0.4
SMIM11B-201ENST00000612624 TROQ12816 1431 aaPredicted RBP12.53□□□□□ -0.4
SMIM11B-201ENST00000612624 NEURL4Q96JN8 1562 aa12.52□□□□□ -0.4
SMIM11B-201ENST00000612624 MED14O60244 1454 aa12.52□□□□□ -0.41
SMIM11B-201ENST00000612624 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
SMIM11B-201ENST00000612624 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
SMIM11B-201ENST00000612624 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
SMIM11B-201ENST00000612624 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
SMIM11B-201ENST00000612624 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMIM11B-201ENST00000612624 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
SMIM11B-201ENST00000612624 RNF17Q9BXT8 1623 aaKnown RBP12.49□□□□□ -0.41
SMIM11B-201ENST00000612624 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
SMIM11B-201ENST00000612624 KANK4Q5T7N3 995 aaPredicted RBP12.49□□□□□ -0.41
SMIM11B-201ENST00000612624 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
SMIM11B-201ENST00000612624 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
SMIM11B-201ENST00000612624 LRRC7Q96NW7 1537 aa12.48□□□□□ -0.41
SMIM11B-201ENST00000612624 FAM135BQ49AJ0 1406 aa12.47□□□□□ -0.41
SMIM11B-201ENST00000612624 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
SMIM11B-201ENST00000612624 ANKLE2Q86XL3 938 aa12.46□□□□□ -0.41
SMIM11B-201ENST00000612624 SYNMO15061 1565 aa12.46□□□□□ -0.42
SMIM11B-201ENST00000612624 ABCC1P33527 1531 aa12.46□□□□□ -0.42
SMIM11B-201ENST00000612624 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
SMIM11B-201ENST00000612624 ITSN2Q9NZM3 1697 aa12.45□□□□□ -0.42
SMIM11B-201ENST00000612624 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
SMIM11B-201ENST00000612624 KIDINS220Q9ULH0 1771 aa12.44□□□□□ -0.42
SMIM11B-201ENST00000612624 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
SMIM11B-201ENST00000612624 DEPDC5O75140 1603 aa12.44□□□□□ -0.42
SMIM11B-201ENST00000612624 POLR1AO95602 1720 aaPredicted RBP12.43□□□□□ -0.42
SMIM11B-201ENST00000612624 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
SMIM11B-201ENST00000612624 PLXNC1O60486 1568 aa12.43□□□□□ -0.42
SMIM11B-201ENST00000612624 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
SMIM11B-201ENST00000612624 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
SMIM11B-201ENST00000612624 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
SMIM11B-201ENST00000612624 THEMISQ8N1K5 641 aaPredicted RBP12.41□□□□□ -0.42
SMIM11B-201ENST00000612624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMIM11B-201ENST00000612624 TNRQ92752 1358 aa12.39□□□□□ -0.43
SMIM11B-201ENST00000612624 SETD1AO15047 1707 aaKnown RBP12.38□□□□□ -0.43
SMIM11B-201ENST00000612624 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
SMIM11B-201ENST00000612624 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
SMIM11B-201ENST00000612624 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
SMIM11B-201ENST00000612624 A2MP01023 1474 aa12.37□□□□□ -0.43
SMIM11B-201ENST00000612624 CDK12Q9NYV4 1490 aaPredicted RBP12.37□□□□□ -0.43
SMIM11B-201ENST00000612624 KDM5DQ9BY66 1539 aa12.36□□□□□ -0.43
SMIM11B-201ENST00000612624 SPAG9O60271 1321 aaKnown RBP12.36□□□□□ -0.43
SMIM11B-201ENST00000612624 PZPP20742 1482 aa12.35□□□□□ -0.43
SMIM11B-201ENST00000612624 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
SMIM11B-201ENST00000612624 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
SMIM11B-201ENST00000612624 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
SMIM11B-201ENST00000612624 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
SMIM11B-201ENST00000612624 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.43
SMIM11B-201ENST00000612624 GGT6Q6P531 493 aa12.33□□□□□ -0.44
SMIM11B-201ENST00000612624 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
SMIM11B-201ENST00000612624 MYOM3Q5VTT5 1437 aa12.33□□□□□ -0.44
SMIM11B-201ENST00000612624 MIA2Q96PC5 1412 aa12.33□□□□□ -0.44
SMIM11B-201ENST00000612624 UGGT1Q9NYU2 1555 aa12.33□□□□□ -0.44
SMIM11B-201ENST00000612624 ZNF644Q9H582 1327 aaPredicted RBP12.33□□□□□ -0.44
SMIM11B-201ENST00000612624 CAMSAP2Q08AD1 1489 aa12.33□□□□□ -0.44
SMIM11B-201ENST00000612624 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
SMIM11B-201ENST00000612624 JCADQ9P266 1359 aa12.32□□□□□ -0.44
SMIM11B-201ENST00000612624 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
SMIM11B-201ENST00000612624 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
SMIM11B-201ENST00000612624 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
SMIM11B-201ENST00000612624 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
SMIM11B-201ENST00000612624 STRCP1A6NGW2 1772 aa12.31□□□□□ -0.44
SMIM11B-201ENST00000612624 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
SMIM11B-201ENST00000612624 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
SMIM11B-201ENST00000612624 SPATA31A6Q5VVP1 1343 aa12.29□□□□□ -0.44
SMIM11B-201ENST00000612624 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
SMIM11B-201ENST00000612624 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms