RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 WASHC2CQ9Y4E1 1318 aa28.3■■■□□ 2.12
VCX3A-203ENST00000612369 EIF2AK4Q9P2K8 1649 aaKnown RBP28.29■■■□□ 2.12
VCX3A-203ENST00000612369 STRCQ7RTU9 1775 aa28.28■■■□□ 2.12
VCX3A-203ENST00000612369 CROCC2H7BZ55 1655 aa28.27■■■□□ 2.12
VCX3A-203ENST00000612369 DUOX2Q9NRD8 1548 aa28.27■■■□□ 2.12
VCX3A-203ENST00000612369 DAPK1P53355 1430 aa28.26■■■□□ 2.12
VCX3A-203ENST00000612369 DNMT1P26358 1616 aaKnown RBP28.26■■■□□ 2.11
VCX3A-203ENST00000612369 RNF17Q9BXT8 1623 aaKnown RBP28.25■■■□□ 2.11
VCX3A-203ENST00000612369 PZPP20742 1482 aa28.23■■■□□ 2.11
VCX3A-203ENST00000612369 MYO3AQ8NEV4 1616 aa28.23■■■□□ 2.11
VCX3A-203ENST00000612369 ZNF142P52746 1687 aaPredicted RBP28.23■■■□□ 2.11
VCX3A-203ENST00000612369 KIF15Q9NS87 1388 aa28.22■■■□□ 2.11
VCX3A-203ENST00000612369 PTPRTO14522 1441 aa28.21■■■□□ 2.11
VCX3A-203ENST00000612369 NCOA1Q15788 1441 aa28.21■■■□□ 2.11
VCX3A-203ENST00000612369 CEP170BQ9Y4F5 1589 aaPredicted RBP28.2■■■□□ 2.1
VCX3A-203ENST00000612369 ERBINQ96RT1 1412 aa28.19■■■□□ 2.1
VCX3A-203ENST00000612369 ZC3H13Q5T200 1668 aaKnown RBP28.19■■■□□ 2.1
VCX3A-203ENST00000612369 CAMSAP1Q5T5Y3 1602 aa28.18■■■□□ 2.1
VCX3A-203ENST00000612369 FBXO41Q8TF61 875 aa28.18■■■□□ 2.1
VCX3A-203ENST00000612369 RRP7BPQ9NSQ0 103 aa28.18■■■□□ 2.1
VCX3A-203ENST00000612369 TNRQ92752 1358 aa28.16■■■□□ 2.1
VCX3A-203ENST00000612369 ANKRD30AQ9BXX3 1397 aa28.16■■■□□ 2.1
VCX3A-203ENST00000612369 FBXO31Q5XUX0 539 aaPredicted RBP28.16■■■□□ 2.1
VCX3A-203ENST00000612369 A2ML1A8K2U0 1454 aa28.15■■■□□ 2.1
VCX3A-203ENST00000612369 ABCC3O15438 1527 aa28.15■■■□□ 2.1
VCX3A-203ENST00000612369 PLA2R1Q13018 1463 aa28.15■■■□□ 2.1
VCX3A-203ENST00000612369 MROH1Q8NDA8 1641 aa28.14■■■□□ 2.09
VCX3A-203ENST00000612369 FAM50AQ14320 339 aaKnown RBP28.13■■■□□ 2.09
VCX3A-203ENST00000612369 PKD2Q13563 968 aa28.11■■■□□ 2.09
VCX3A-203ENST00000612369 CERKQ8TCT0 537 aa28.11■■■□□ 2.09
VCX3A-203ENST00000612369 CHIC2Q9UKJ5 165 aa28.11■■■□□ 2.09
VCX3A-203ENST00000612369 ADGRL2O95490 1459 aa28.08■■■□□ 2.09
VCX3A-203ENST00000612369 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.09
VCX3A-203ENST00000612369 NLRP1Q9C000 1473 aa28.08■■■□□ 2.09
VCX3A-203ENST00000612369 NCKAP5LQ9HCH0 1330 aa28.05■■■□□ 2.08
VCX3A-203ENST00000612369 DEPDC5O75140 1603 aa28.04■■■□□ 2.08
VCX3A-203ENST00000612369 CEP152O94986 1710 aa28.04■■■□□ 2.08
VCX3A-203ENST00000612369 SPATA31D1Q6ZQQ2 1576 aa28.03■■■□□ 2.08
VCX3A-203ENST00000612369 KANK1Q14678 1352 aa28.03■■■□□ 2.08
VCX3A-203ENST00000612369 ARHGAP31Q2M1Z3 1444 aa28.02■■■□□ 2.08
VCX3A-203ENST00000612369 THEMISQ8N1K5 641 aaPredicted RBP28.01■■■□□ 2.07
VCX3A-203ENST00000612369 ERVK-7P63135 1459 aa28.01■■■□□ 2.07
VCX3A-203ENST00000612369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28■■■□□ 2.07
VCX3A-203ENST00000612369 UGGT1Q9NYU2 1555 aa27.98■■■□□ 2.07
VCX3A-203ENST00000612369 LMTK2Q8IWU2 1503 aa27.95■■■□□ 2.06
VCX3A-203ENST00000612369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.95■■■□□ 2.06
VCX3A-203ENST00000612369 ANKRD50Q9ULJ7 1429 aa27.94■■■□□ 2.06
VCX3A-203ENST00000612369 LTBP4Q8N2S1 1624 aa27.94■■■□□ 2.06
VCX3A-203ENST00000612369 VWDEQ8N2E2 1590 aa27.94■■■□□ 2.06
VCX3A-203ENST00000612369 ANKLE2Q86XL3 938 aa27.93■■■□□ 2.06
VCX3A-203ENST00000612369 ROCK1Q13464 1354 aa27.91■■■□□ 2.06
VCX3A-203ENST00000612369 CFAP65Q6ZU64 1925 aaKnown RBP27.91■■■□□ 2.06
VCX3A-203ENST00000612369 PPARGC1BQ86YN6 1023 aaKnown RBP27.91■■■□□ 2.06
VCX3A-203ENST00000612369 POLR1AO95602 1720 aaPredicted RBP27.91■■■□□ 2.06
VCX3A-203ENST00000612369 IQSEC2Q5JU85 1478 aa27.87■■■□□ 2.05
VCX3A-203ENST00000612369 NEURL4Q96JN8 1562 aa27.86■■■□□ 2.05
VCX3A-203ENST00000612369 ZNF335Q9H4Z2 1342 aaPredicted RBP27.85■■■□□ 2.05
VCX3A-203ENST00000612369 MED14O60244 1454 aa27.84■■■□□ 2.05
VCX3A-203ENST00000612369 EFCAB6Q5THR3 1501 aa27.82■■■□□ 2.04
VCX3A-203ENST00000612369 UBR1Q8IWV7 1749 aa27.82■■■□□ 2.04
VCX3A-203ENST00000612369 NPHP4O75161 1426 aaPredicted RBP27.79■■■□□ 2.04
VCX3A-203ENST00000612369 RPRD2Q5VT52 1461 aaKnown RBP27.78■■■□□ 2.04
VCX3A-203ENST00000612369 ITGAEP38570 1179 aa27.78■■■□□ 2.04
VCX3A-203ENST00000612369 NOS1P29475 1434 aa27.77■■■□□ 2.04
VCX3A-203ENST00000612369 RRBP1Q9P2E9 1410 aaKnown RBP27.77■■■□□ 2.04
VCX3A-203ENST00000612369 UNC13BO14795 1591 aa27.77■■■□□ 2.04
VCX3A-203ENST00000612369 TET3O43151 1660 aa27.75■■■□□ 2.03
VCX3A-203ENST00000612369 SLIT1O75093 1534 aa27.74■■■□□ 2.03
VCX3A-203ENST00000612369 SLC52A1Q9NWF4 448 aa27.74■■■□□ 2.03
VCX3A-203ENST00000612369 ARHGAP23Q9P227 1491 aa27.74■■■□□ 2.03
VCX3A-203ENST00000612369 KDM5AP29375 1690 aaKnown RBP27.74■■■□□ 2.03
VCX3A-203ENST00000612369 PIK3C2BO00750 1634 aa27.74■■■□□ 2.03
VCX3A-203ENST00000612369 IQGAP1P46940 1657 aa27.73■■■□□ 2.03
VCX3A-203ENST00000612369 IDI1Q13907 227 aa27.73■■■□□ 2.03
VCX3A-203ENST00000612369 STAG3Q9UJ98 1225 aa27.73■■■□□ 2.03
VCX3A-203ENST00000612369 SYNMO15061 1565 aa27.72■■■□□ 2.03
VCX3A-203ENST00000612369 SCAF11Q99590 1463 aaKnown RBP27.71■■■□□ 2.03
VCX3A-203ENST00000612369 EID1Q9Y6B2 187 aa27.7■■■□□ 2.02
VCX3A-203ENST00000612369 GCC2Q8IWJ2 1684 aa27.7■■■□□ 2.02
VCX3A-203ENST00000612369 CPS1P31327 1500 aa27.7■■■□□ 2.02
VCX3A-203ENST00000612369 TXNDC2Q86VQ3 553 aa27.69■■■□□ 2.02
VCX3A-203ENST00000612369 TMEM2Q9UHN6 1383 aa27.68■■■□□ 2.02
VCX3A-203ENST00000612369 LTKP29376 864 aa27.67■■■□□ 2.02
VCX3A-203ENST00000612369 IQGAP3Q86VI3 1631 aa27.67■■■□□ 2.02
VCX3A-203ENST00000612369 NUP155O75694 1391 aa27.65■■■□□ 2.02
VCX3A-203ENST00000612369 ADGRB3O60242 1522 aa27.62■■■□□ 2.01
VCX3A-203ENST00000612369 E9PCH4 1651 aa27.6■■■□□ 2.01
VCX3A-203ENST00000612369 UBAP1LF5GYI3 381 aa27.59■■■□□ 2.01
VCX3A-203ENST00000612369 NAIPQ13075 1403 aa27.55■■■□□ 2
VCX3A-203ENST00000612369 HDGFP51858 240 aaKnown RBP27.53■■■□□ 2
VCX3A-203ENST00000612369 TOM1O60784 492 aa27.51■■□□□ 1.99
VCX3A-203ENST00000612369 TMEM131LA2VDJ0 1609 aa27.5■■□□□ 1.99
VCX3A-203ENST00000612369 STRCP1A6NGW2 1772 aa27.5■■□□□ 1.99
VCX3A-203ENST00000612369 HFM1A2PYH4 1435 aa27.49■■□□□ 1.99
VCX3A-203ENST00000612369 LRRC7Q96NW7 1537 aa27.48■■□□□ 1.99
VCX3A-203ENST00000612369 ZFYVE9O95405 1425 aa27.48■■□□□ 1.99
VCX3A-203ENST00000612369 MYO5BQ9ULV0 1848 aa27.46■■□□□ 1.99
VCX3A-203ENST00000612369 RIMS2Q9UQ26 1411 aa27.45■■□□□ 1.98
VCX3A-203ENST00000612369 CHGAP10645 457 aaKnown RBP27.45■■□□□ 1.98
VCX3A-203ENST00000612369 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms