RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 LTBP4Q8N2S1 1624 aa28.12■■■□□ 2.09
SSBP1-215ENST00000612337 KDM5DQ9BY66 1539 aa28.12■■■□□ 2.09
SSBP1-215ENST00000612337 NCKAP5LQ9HCH0 1330 aa28.11■■■□□ 2.09
SSBP1-215ENST00000612337 PKD2Q13563 968 aa28.1■■■□□ 2.09
SSBP1-215ENST00000612337 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
SSBP1-215ENST00000612337 MAST1Q9Y2H9 1570 aa28.08■■■□□ 2.09
SSBP1-215ENST00000612337 MYOM3Q5VTT5 1437 aa28.08■■■□□ 2.09
SSBP1-215ENST00000612337 MIA2Q96PC5 1412 aa28.08■■■□□ 2.09
SSBP1-215ENST00000612337 A2ML1A8K2U0 1454 aa28.08■■■□□ 2.09
SSBP1-215ENST00000612337 WASHC2CQ9Y4E1 1318 aa28.07■■■□□ 2.08
SSBP1-215ENST00000612337 PZPP20742 1482 aa28.07■■■□□ 2.08
SSBP1-215ENST00000612337 IQSEC2Q5JU85 1478 aa28.04■■■□□ 2.08
SSBP1-215ENST00000612337 TNRQ92752 1358 aa28.04■■■□□ 2.08
SSBP1-215ENST00000612337 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
SSBP1-215ENST00000612337 FBXO31Q5XUX0 539 aaPredicted RBP28.03■■■□□ 2.08
SSBP1-215ENST00000612337 RNF17Q9BXT8 1623 aaKnown RBP28■■■□□ 2.07
SSBP1-215ENST00000612337 ZNF335Q9H4Z2 1342 aaPredicted RBP27.97■■■□□ 2.07
SSBP1-215ENST00000612337 EIF2AK4Q9P2K8 1649 aaKnown RBP27.97■■■□□ 2.07
SSBP1-215ENST00000612337 APLP2Q06481 763 aa27.95■■■□□ 2.06
SSBP1-215ENST00000612337 ZC3H13Q5T200 1668 aaKnown RBP27.94■■■□□ 2.06
SSBP1-215ENST00000612337 ABCC3O15438 1527 aa27.93■■■□□ 2.06
SSBP1-215ENST00000612337 NLRP1Q9C000 1473 aa27.93■■■□□ 2.06
SSBP1-215ENST00000612337 POLR1AO95602 1720 aaPredicted RBP27.91■■■□□ 2.06
SSBP1-215ENST00000612337 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
SSBP1-215ENST00000612337 MROH1Q8NDA8 1641 aa27.89■■■□□ 2.06
SSBP1-215ENST00000612337 SHANK2Q9UPX8 1470 aa27.89■■■□□ 2.05
SSBP1-215ENST00000612337 PTPN23Q9H3S7 1636 aa27.89■■■□□ 2.05
SSBP1-215ENST00000612337 THEMISQ8N1K5 641 aaPredicted RBP27.88■■■□□ 2.05
SSBP1-215ENST00000612337 NEURL4Q96JN8 1562 aa27.88■■■□□ 2.05
SSBP1-215ENST00000612337 ABCC5O15440 1437 aa27.87■■■□□ 2.05
SSBP1-215ENST00000612337 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
SSBP1-215ENST00000612337 UGGT1Q9NYU2 1555 aa27.86■■■□□ 2.05
SSBP1-215ENST00000612337 CROCC2H7BZ55 1655 aa27.86■■■□□ 2.05
SSBP1-215ENST00000612337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.85■■■□□ 2.05
SSBP1-215ENST00000612337 KIF15Q9NS87 1388 aa27.85■■■□□ 2.05
SSBP1-215ENST00000612337 ANKLE2Q86XL3 938 aa27.84■■■□□ 2.05
SSBP1-215ENST00000612337 FGD6Q6ZV73 1430 aa27.83■■■□□ 2.05
SSBP1-215ENST00000612337 ERVK-7P63135 1459 aa27.83■■■□□ 2.04
SSBP1-215ENST00000612337 CEP152O94986 1710 aa27.82■■■□□ 2.04
SSBP1-215ENST00000612337 ERBINQ96RT1 1412 aa27.82■■■□□ 2.04
SSBP1-215ENST00000612337 DAPK1P53355 1430 aa27.81■■■□□ 2.04
SSBP1-215ENST00000612337 DEPDC5O75140 1603 aa27.79■■■□□ 2.04
SSBP1-215ENST00000612337 RRP7BPQ9NSQ0 103 aa27.79■■■□□ 2.04
SSBP1-215ENST00000612337 PRDM15P57071 1507 aaPredicted RBP27.78■■■□□ 2.04
SSBP1-215ENST00000612337 MED14O60244 1454 aa27.78■■■□□ 2.04
SSBP1-215ENST00000612337 UBAP1LF5GYI3 381 aa27.78■■■□□ 2.04
SSBP1-215ENST00000612337 CPS1P31327 1500 aa27.76■■■□□ 2.03
SSBP1-215ENST00000612337 NPHP4O75161 1426 aaPredicted RBP27.75■■■□□ 2.03
SSBP1-215ENST00000612337 CFAP65Q6ZU64 1925 aaKnown RBP27.75■■■□□ 2.03
SSBP1-215ENST00000612337 ARHGAP31Q2M1Z3 1444 aa27.74■■■□□ 2.03
SSBP1-215ENST00000612337 VWDEQ8N2E2 1590 aa27.72■■■□□ 2.03
SSBP1-215ENST00000612337 DISP3Q9P2K9 1392 aa27.72■■■□□ 2.03
SSBP1-215ENST00000612337 ANKRD30AQ9BXX3 1397 aa27.71■■■□□ 2.03
SSBP1-215ENST00000612337 IQGAP1P46940 1657 aa27.7■■■□□ 2.02
SSBP1-215ENST00000612337 UBR1Q8IWV7 1749 aa27.69■■■□□ 2.02
SSBP1-215ENST00000612337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.68■■■□□ 2.025e-6■□□□□ 8.4
SSBP1-215ENST00000612337 CHIC2Q9UKJ5 165 aa27.68■■■□□ 2.02
SSBP1-215ENST00000612337 KANK1Q14678 1352 aa27.67■■■□□ 2.02
SSBP1-215ENST00000612337 LMTK2Q8IWU2 1503 aa27.62■■■□□ 2.01
SSBP1-215ENST00000612337 ADGRL2O95490 1459 aa27.62■■■□□ 2.01
SSBP1-215ENST00000612337 SLIT1O75093 1534 aa27.61■■■□□ 2.01
SSBP1-215ENST00000612337 SCAF11Q99590 1463 aaKnown RBP27.6■■■□□ 2.01
SSBP1-215ENST00000612337 ARHGAP23Q9P227 1491 aa27.6■■■□□ 2.01
SSBP1-215ENST00000612337 TOM1O60784 492 aa27.6■■■□□ 2.01
SSBP1-215ENST00000612337 FAM50AQ14320 339 aaKnown RBP27.57■■■□□ 2
SSBP1-215ENST00000612337 PIK3C2BO00750 1634 aa27.56■■■□□ 2
SSBP1-215ENST00000612337 LTKP29376 864 aa27.56■■■□□ 2
SSBP1-215ENST00000612337 ILDR2Q71H61 639 aa27.56■■■□□ 2
SSBP1-215ENST00000612337 STRCP1A6NGW2 1772 aa27.55■■■□□ 2
SSBP1-215ENST00000612337 TXNDC2Q86VQ3 553 aa27.55■■■□□ 2
SSBP1-215ENST00000612337 PIP4K2BP78356 416 aa27.54■■■□□ 2
SSBP1-215ENST00000612337 SCAF1Q9H7N4 1312 aaKnown RBP27.53■■■□□ 2
SSBP1-215ENST00000612337 EFCAB6Q5THR3 1501 aa27.52■■■□□ 2
SSBP1-215ENST00000612337 EID1Q9Y6B2 187 aa27.52■■■□□ 2
SSBP1-215ENST00000612337 KDM5AP29375 1690 aaKnown RBP27.52■■■□□ 2
SSBP1-215ENST00000612337 SYNMO15061 1565 aa27.52■■■□□ 2
SSBP1-215ENST00000612337 LRRC7Q96NW7 1537 aa27.51■■■□□ 2
SSBP1-215ENST00000612337 TMEM2Q9UHN6 1383 aa27.51■■□□□ 1.99
SSBP1-215ENST00000612337 ANKRD50Q9ULJ7 1429 aa27.5■■□□□ 1.99
SSBP1-215ENST00000612337 STAG3Q9UJ98 1225 aa27.5■■□□□ 1.99
SSBP1-215ENST00000612337 NOS1P29475 1434 aa27.5■■□□□ 1.99
SSBP1-215ENST00000612337 HSPA1LP34931 641 aa27.49■■□□□ 1.99
SSBP1-215ENST00000612337 IDI1Q13907 227 aa27.49■■□□□ 1.99
SSBP1-215ENST00000612337 ALKQ9UM73 1620 aa27.49■■□□□ 1.99
SSBP1-215ENST00000612337 RPRD2Q5VT52 1461 aaKnown RBP27.43■■□□□ 1.98
SSBP1-215ENST00000612337 SLC52A1Q9NWF4 448 aa27.42■■□□□ 1.98
SSBP1-215ENST00000612337 ADGRB3O60242 1522 aa27.41■■□□□ 1.98
SSBP1-215ENST00000612337 SOCS7O14512 581 aa27.41■■□□□ 1.98
SSBP1-215ENST00000612337 TET3O43151 1660 aa27.39■■□□□ 1.97
SSBP1-215ENST00000612337 UNC13BO14795 1591 aa27.37■■□□□ 1.97
SSBP1-215ENST00000612337 ROCK1Q13464 1354 aa27.36■■□□□ 1.97
SSBP1-215ENST00000612337 XIRP1Q702N8 1843 aaKnown RBP27.34■■□□□ 1.97
SSBP1-215ENST00000612337 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
SSBP1-215ENST00000612337 MED1Q15648 1581 aaPredicted RBP27.31■■□□□ 1.96
SSBP1-215ENST00000612337 KCNA6P17658 529 aa27.29■■□□□ 1.96
SSBP1-215ENST00000612337 SLC26A8Q96RN1 970 aa27.29■■□□□ 1.96
SSBP1-215ENST00000612337 ZFYVE9O95405 1425 aa27.27■■□□□ 1.96
SSBP1-215ENST00000612337 MYO5BQ9ULV0 1848 aa27.27■■□□□ 1.96
SSBP1-215ENST00000612337 E9PCH4 1651 aa27.26■■□□□ 1.95
SSBP1-215ENST00000612337 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms