RNA–Protein interactions for RNA: ENST00000612292.1

MMP28-202, Transcript of matrix metallopeptidase 28, humanhuman

TSL 5

Gene MMP28, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-202ENST00000612292 DUOX2Q9NRD8 1548 aa28.57■■■□□ 2.16
MMP28-202ENST00000612292 FAM135AQ9P2D6 1515 aa28.57■■■□□ 2.16
MMP28-202ENST00000612292 RRP7BPQ9NSQ0 103 aa28.56■■■□□ 2.16
MMP28-202ENST00000612292 EIF2AK4Q9P2K8 1649 aaKnown RBP28.56■■■□□ 2.16
MMP28-202ENST00000612292 RNF17Q9BXT8 1623 aaKnown RBP28.54■■■□□ 2.16
MMP28-202ENST00000612292 KDM5DQ9BY66 1539 aa28.54■■■□□ 2.16
MMP28-202ENST00000612292 STRCQ7RTU9 1775 aa28.54■■■□□ 2.16
MMP28-202ENST00000612292 KIF15Q9NS87 1388 aa28.53■■■□□ 2.16
MMP28-202ENST00000612292 FAM50AQ14320 339 aaKnown RBP28.51■■■□□ 2.15
MMP28-202ENST00000612292 CHIC2Q9UKJ5 165 aa28.51■■■□□ 2.15
MMP28-202ENST00000612292 FBXO31Q5XUX0 539 aaPredicted RBP28.5■■■□□ 2.15
MMP28-202ENST00000612292 NCOA1Q15788 1441 aa28.49■■■□□ 2.15
MMP28-202ENST00000612292 MROH1Q8NDA8 1641 aa28.48■■■□□ 2.15
MMP28-202ENST00000612292 PPARGC1BQ86YN6 1023 aaKnown RBP28.48■■■□□ 2.15
MMP28-202ENST00000612292 ANKRD30AQ9BXX3 1397 aa28.48■■■□□ 2.15
MMP28-202ENST00000612292 PZPP20742 1482 aa28.46■■■□□ 2.15
MMP28-202ENST00000612292 ERBINQ96RT1 1412 aa28.46■■■□□ 2.15
MMP28-202ENST00000612292 MYO3AQ8NEV4 1616 aa28.44■■■□□ 2.14
MMP28-202ENST00000612292 DMRT2Q9Y5R5 561 aa28.44■■■□□ 2.14
MMP28-202ENST00000612292 ABCC3O15438 1527 aa28.43■■■□□ 2.14
MMP28-202ENST00000612292 ADGRL2O95490 1459 aa28.43■■■□□ 2.14
MMP28-202ENST00000612292 ZNF142P52746 1687 aaPredicted RBP28.42■■■□□ 2.14
MMP28-202ENST00000612292 ZC3H13Q5T200 1668 aaKnown RBP28.42■■■□□ 2.14
MMP28-202ENST00000612292 ILDR1Q86SU0 546 aaPredicted RBP28.39■■■□□ 2.14
MMP28-202ENST00000612292 CEP170BQ9Y4F5 1589 aaPredicted RBP28.39■■■□□ 2.14
MMP28-202ENST00000612292 CAMSAP1Q5T5Y3 1602 aa28.39■■■□□ 2.13
MMP28-202ENST00000612292 TNRQ92752 1358 aa28.38■■■□□ 2.13
MMP28-202ENST00000612292 CEP152O94986 1710 aa28.38■■■□□ 2.13
MMP28-202ENST00000612292 DEPDC5O75140 1603 aa28.36■■■□□ 2.13
MMP28-202ENST00000612292 A2ML1A8K2U0 1454 aa28.36■■■□□ 2.13
MMP28-202ENST00000612292 PRDM15P57071 1507 aaPredicted RBP28.36■■■□□ 2.13
MMP28-202ENST00000612292 PTPRTO14522 1441 aa28.35■■■□□ 2.13
MMP28-202ENST00000612292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.13
MMP28-202ENST00000612292 CFAP65Q6ZU64 1925 aaKnown RBP28.33■■■□□ 2.13
MMP28-202ENST00000612292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.33■■■□□ 2.13
MMP28-202ENST00000612292 NCKAP5LQ9HCH0 1330 aa28.31■■■□□ 2.12
MMP28-202ENST00000612292 PLA2R1Q13018 1463 aa28.31■■■□□ 2.12
MMP28-202ENST00000612292 SPATA31D1Q6ZQQ2 1576 aa28.31■■■□□ 2.12
MMP28-202ENST00000612292 ARHGAP31Q2M1Z3 1444 aa28.3■■■□□ 2.12
MMP28-202ENST00000612292 VWDEQ8N2E2 1590 aa28.28■■■□□ 2.12
MMP28-202ENST00000612292 PKD2Q13563 968 aa28.28■■■□□ 2.12
MMP28-202ENST00000612292 ERVK-7P63135 1459 aa28.27■■■□□ 2.12
MMP28-202ENST00000612292 NLRP1Q9C000 1473 aa28.27■■■□□ 2.12
MMP28-202ENST00000612292 ANKRD50Q9ULJ7 1429 aa28.27■■■□□ 2.12
MMP28-202ENST00000612292 ROCK1Q13464 1354 aa28.26■■■□□ 2.12
MMP28-202ENST00000612292 KANK1Q14678 1352 aa28.26■■■□□ 2.12
MMP28-202ENST00000612292 LMTK2Q8IWU2 1503 aa28.24■■■□□ 2.11
MMP28-202ENST00000612292 THEMISQ8N1K5 641 aaPredicted RBP28.23■■■□□ 2.11
MMP28-202ENST00000612292 CERKQ8TCT0 537 aa28.23■■■□□ 2.11
MMP28-202ENST00000612292 FBXO41Q8TF61 875 aa28.23■■■□□ 2.11
MMP28-202ENST00000612292 RRBP1Q9P2E9 1410 aaKnown RBP28.21■■■□□ 2.11
MMP28-202ENST00000612292 ITGAEP38570 1179 aa28.21■■■□□ 2.11
MMP28-202ENST00000612292 UGGT1Q9NYU2 1555 aa28.2■■■□□ 2.1
MMP28-202ENST00000612292 ANKLE2Q86XL3 938 aa28.14■■■□□ 2.1
MMP28-202ENST00000612292 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
MMP28-202ENST00000612292 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
MMP28-202ENST00000612292 EFCAB6Q5THR3 1501 aa28.11■■■□□ 2.09
MMP28-202ENST00000612292 UNC13BO14795 1591 aa28.11■■■□□ 2.09
MMP28-202ENST00000612292 NEURL4Q96JN8 1562 aa28.11■■■□□ 2.09
MMP28-202ENST00000612292 UBR1Q8IWV7 1749 aa28.1■■■□□ 2.09
MMP28-202ENST00000612292 NOS1P29475 1434 aa28.09■■■□□ 2.09
MMP28-202ENST00000612292 IDI1Q13907 227 aa28.07■■■□□ 2.08
MMP28-202ENST00000612292 ZNF335Q9H4Z2 1342 aaPredicted RBP28.06■■■□□ 2.08
MMP28-202ENST00000612292 MED14O60244 1454 aa28.06■■■□□ 2.08
MMP28-202ENST00000612292 TET3O43151 1660 aa28.05■■■□□ 2.08
MMP28-202ENST00000612292 RPRD2Q5VT52 1461 aaKnown RBP28.05■■■□□ 2.08
MMP28-202ENST00000612292 SYNMO15061 1565 aa28.04■■■□□ 2.08
MMP28-202ENST00000612292 PIK3C2BO00750 1634 aa28.03■■■□□ 2.08
MMP28-202ENST00000612292 GCC2Q8IWJ2 1684 aa28.01■■■□□ 2.07
MMP28-202ENST00000612292 ARHGAP23Q9P227 1491 aa28.01■■■□□ 2.07
MMP28-202ENST00000612292 IQGAP3Q86VI3 1631 aa28■■■□□ 2.07
MMP28-202ENST00000612292 SLC52A1Q9NWF4 448 aa28■■■□□ 2.07
MMP28-202ENST00000612292 NPHP4O75161 1426 aaPredicted RBP28■■■□□ 2.07
MMP28-202ENST00000612292 NUP155O75694 1391 aa27.99■■■□□ 2.07
MMP28-202ENST00000612292 SLIT1O75093 1534 aa27.99■■■□□ 2.07
MMP28-202ENST00000612292 LTKP29376 864 aa27.99■■■□□ 2.07
MMP28-202ENST00000612292 KDM5AP29375 1690 aaKnown RBP27.99■■■□□ 2.07
MMP28-202ENST00000612292 NAIPQ13075 1403 aa27.96■■■□□ 2.07
MMP28-202ENST00000612292 TXNDC2Q86VQ3 553 aa27.96■■■□□ 2.07
MMP28-202ENST00000612292 E9PCH4 1651 aa27.96■■■□□ 2.07
MMP28-202ENST00000612292 STAG3Q9UJ98 1225 aa27.95■■■□□ 2.06
MMP28-202ENST00000612292 IQSEC2Q5JU85 1478 aa27.95■■■□□ 2.06
MMP28-202ENST00000612292 IQGAP1P46940 1657 aa27.94■■■□□ 2.06
MMP28-202ENST00000612292 TMEM2Q9UHN6 1383 aa27.94■■■□□ 2.06
MMP28-202ENST00000612292 SCAF11Q99590 1463 aaKnown RBP27.93■■■□□ 2.06
MMP28-202ENST00000612292 EID1Q9Y6B2 187 aa27.9■■■□□ 2.06
MMP28-202ENST00000612292 HFM1A2PYH4 1435 aa27.87■■■□□ 2.05
MMP28-202ENST00000612292 ADGRB3O60242 1522 aa27.87■■■□□ 2.05
MMP28-202ENST00000612292 MYO5BQ9ULV0 1848 aa27.85■■■□□ 2.05
MMP28-202ENST00000612292 CPS1P31327 1500 aa27.83■■■□□ 2.05
MMP28-202ENST00000612292 TMEM131LA2VDJ0 1609 aa27.83■■■□□ 2.05
MMP28-202ENST00000612292 STRCP1A6NGW2 1772 aa27.81■■■□□ 2.04
MMP28-202ENST00000612292 ZFYVE9O95405 1425 aa27.77■■■□□ 2.04
MMP28-202ENST00000612292 CHGAP10645 457 aaKnown RBP27.74■■■□□ 2.03
MMP28-202ENST00000612292 HDGFP51858 240 aaKnown RBP27.74■■■□□ 2.03
MMP28-202ENST00000612292 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
MMP28-202ENST00000612292 SPHKAPQ2M3C7 1700 aa27.74■■■□□ 2.03
MMP28-202ENST00000612292 RIMS2Q9UQ26 1411 aa27.73■■■□□ 2.03
MMP28-202ENST00000612292 UBAP1LF5GYI3 381 aa27.72■■■□□ 2.03
MMP28-202ENST00000612292 SLC26A8Q96RN1 970 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms