RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 IQGAP2Q13576 1575 aa14.49□□□□□ -0.09
CDH4-202ENST00000611855 NLRP13Q86W25 1043 aa14.49□□□□□ -0.09
CDH4-202ENST00000611855 FRAT2O75474 233 aaPredicted RBP14.48□□□□□ -0.09
CDH4-202ENST00000611855 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
CDH4-202ENST00000611855 NBPF1Q3BBV0 1214 aa14.48□□□□□ -0.09
CDH4-202ENST00000611855 ROCK2O75116 1388 aaKnown RBP14.48□□□□□ -0.09
CDH4-202ENST00000611855 RGS3P49796 1198 aa14.47□□□□□ -0.09
CDH4-202ENST00000611855 MS4A1P11836 297 aa14.46□□□□□ -0.09
CDH4-202ENST00000611855 PKNOX2Q96KN3 472 aa14.46□□□□□ -0.09
CDH4-202ENST00000611855 KTN1Q86UP2 1357 aaKnown RBP14.46□□□□□ -0.09
CDH4-202ENST00000611855 CAMSAP2Q08AD1 1489 aa14.46□□□□□ -0.1
CDH4-202ENST00000611855 ARID4BQ4LE39 1312 aaPredicted RBP14.45□□□□□ -0.1
CDH4-202ENST00000611855 KIF14Q15058 1648 aa14.45□□□□□ -0.1
CDH4-202ENST00000611855 RSPH6AQ9H0K4 717 aa14.44□□□□□ -0.1
CDH4-202ENST00000611855 NUP153P49790 1475 aaKnown RBP14.44□□□□□ -0.1
CDH4-202ENST00000611855 ANKRD50Q9ULJ7 1429 aa14.44□□□□□ -0.1
CDH4-202ENST00000611855 RALGAPBQ86X10 1494 aa14.42□□□□□ -0.1
CDH4-202ENST00000611855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDH4-202ENST00000611855 PANK3Q9H999 370 aa14.42□□□□□ -0.1
CDH4-202ENST00000611855 ANKRD30AQ9BXX3 1397 aa14.41□□□□□ -0.1
CDH4-202ENST00000611855 PDE3BQ13370 1112 aa14.41□□□□□ -0.1
CDH4-202ENST00000611855 KIAA0586Q9BVV6 1533 aa14.4□□□□□ -0.1
CDH4-202ENST00000611855 HNRNPMP52272 730 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDH4-202ENST00000611855 VSIG10Q8N0Z9 540 aa14.4□□□□□ -0.11
CDH4-202ENST00000611855 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.11
CDH4-202ENST00000611855 PER1O15534 1290 aaPredicted RBP14.39□□□□□ -0.11
CDH4-202ENST00000611855 PARD3Q8TEW0 1356 aa14.38□□□□□ -0.11
CDH4-202ENST00000611855 FAM43AQ8N2R8 423 aa14.38□□□□□ -0.11
CDH4-202ENST00000611855 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
CDH4-202ENST00000611855 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
CDH4-202ENST00000611855 PLB1Q6P1J6 1458 aa14.37□□□□□ -0.11
CDH4-202ENST00000611855 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
CDH4-202ENST00000611855 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
CDH4-202ENST00000611855 DISP3Q9P2K9 1392 aa14.36□□□□□ -0.11
CDH4-202ENST00000611855 UHRF1BP1Q6BDS2 1440 aa14.36□□□□□ -0.11
CDH4-202ENST00000611855 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
CDH4-202ENST00000611855 NAP1L5Q96NT1 182 aaPredicted RBP14.36□□□□□ -0.11
CDH4-202ENST00000611855 TROQ12816 1431 aaPredicted RBP14.35□□□□□ -0.11
CDH4-202ENST00000611855 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
CDH4-202ENST00000611855 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
CDH4-202ENST00000611855 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
CDH4-202ENST00000611855 POGKQ9P215 609 aa14.35□□□□□ -0.11
CDH4-202ENST00000611855 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
CDH4-202ENST00000611855 GLIPR1L2Q4G1C9 344 aa14.34□□□□□ -0.11
CDH4-202ENST00000611855 FAM161AQ3B820 660 aa14.33□□□□□ -0.11
CDH4-202ENST00000611855 KDM2BQ8NHM5 1336 aa14.33□□□□□ -0.12
CDH4-202ENST00000611855 SLKQ9H2G2 1235 aaPredicted RBP14.33□□□□□ -0.12
CDH4-202ENST00000611855 RRAGDQ9NQL2 400 aaPredicted RBP14.33□□□□□ -0.12
CDH4-202ENST00000611855 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
CDH4-202ENST00000611855 RAPGEF6Q8TEU7 1601 aa14.32□□□□□ -0.12
CDH4-202ENST00000611855 WDR43Q15061 677 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDH4-202ENST00000611855 C9orf84Q5VXU9 1444 aa14.32□□□□□ -0.12
CDH4-202ENST00000611855 PLEKHH1Q9ULM0 1364 aa14.32□□□□□ -0.12
CDH4-202ENST00000611855 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
CDH4-202ENST00000611855 KIAA0556O60303 1618 aa14.31□□□□□ -0.12
CDH4-202ENST00000611855 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
CDH4-202ENST00000611855 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
CDH4-202ENST00000611855 ADGBQ8N7X0 1667 aa14.3□□□□□ -0.12
CDH4-202ENST00000611855 PLEKHD1A6NEE1 506 aa14.3□□□□□ -0.12
CDH4-202ENST00000611855 ZMYND15Q9H091 742 aa14.3□□□□□ -0.12
CDH4-202ENST00000611855 BCAR3O75815 825 aa14.29□□□□□ -0.12
CDH4-202ENST00000611855 TESK2Q96S53 571 aa14.29□□□□□ -0.12
CDH4-202ENST00000611855 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
CDH4-202ENST00000611855 E9PCH4 1651 aa14.28□□□□□ -0.12
CDH4-202ENST00000611855 ADGRL2O95490 1459 aa14.27□□□□□ -0.12
CDH4-202ENST00000611855 CCDC144AA2RUR9 1427 aa14.27□□□□□ -0.13
CDH4-202ENST00000611855 BLMP54132 1417 aaPredicted RBP14.27□□□□□ -0.13
CDH4-202ENST00000611855 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
CDH4-202ENST00000611855 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
CDH4-202ENST00000611855 PRAG1Q86YV5 1406 aa14.26□□□□□ -0.13
CDH4-202ENST00000611855 SEC24BO95487 1268 aa14.26□□□□□ -0.13
CDH4-202ENST00000611855 TMF1P82094 1093 aa14.26□□□□□ -0.13
CDH4-202ENST00000611855 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
CDH4-202ENST00000611855 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
CDH4-202ENST00000611855 KNSTRNQ9Y448 316 aa14.26□□□□□ -0.13
CDH4-202ENST00000611855 SPRYD3Q8NCJ5 442 aa14.25□□□□□ -0.13
CDH4-202ENST00000611855 IGHDP01880 384 aa14.24□□□□□ -0.13
CDH4-202ENST00000611855 HSP90AA2PQ14568 343 aaPredicted RBP14.24□□□□□ -0.13
CDH4-202ENST00000611855 APAF1O14727 1248 aa14.24□□□□□ -0.13
CDH4-202ENST00000611855 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
CDH4-202ENST00000611855 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
CDH4-202ENST00000611855 ITSN2Q9NZM3 1697 aa14.23□□□□□ -0.13
CDH4-202ENST00000611855 ZMYM4Q5VZL5 1548 aa14.23□□□□□ -0.13
CDH4-202ENST00000611855 DMRT2Q9Y5R5 561 aa14.23□□□□□ -0.13
CDH4-202ENST00000611855 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
CDH4-202ENST00000611855 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
CDH4-202ENST00000611855 KDM5DQ9BY66 1539 aa14.22□□□□□ -0.13
CDH4-202ENST00000611855 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
CDH4-202ENST00000611855 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
CDH4-202ENST00000611855 CANXP27824 592 aaKnown RBP14.21□□□□□ -0.13
CDH4-202ENST00000611855 HSP90AA1P07900 732 aaKnown RBP14.21□□□□□ -0.13
CDH4-202ENST00000611855 NEUROD2Q15784 382 aa14.21□□□□□ -0.13
CDH4-202ENST00000611855 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
CDH4-202ENST00000611855 COG6Q9Y2V7 657 aa14.21□□□□□ -0.14
CDH4-202ENST00000611855 EIF4G3O43432 1585 aaKnown RBP14.2□□□□□ -0.14
CDH4-202ENST00000611855 SLFN5Q08AF3 891 aa14.2□□□□□ -0.14
CDH4-202ENST00000611855 JPH4Q96JJ6 628 aa14.2□□□□□ -0.14
CDH4-202ENST00000611855 A2MP01023 1474 aa14.19□□□□□ -0.14
CDH4-202ENST00000611855 FAM135AQ9P2D6 1515 aa14.19□□□□□ -0.14
CDH4-202ENST00000611855 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms