RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 NBR1Q14596 966 aa8.32□□□□□ -1.08
SNX13-213ENST00000611725 POGKQ9P215 609 aa8.32□□□□□ -1.08
SNX13-213ENST00000611725 RRP1P56182 461 aaKnown RBP8.32□□□□□ -1.08
SNX13-213ENST00000611725 SAFB2Q14151 953 aaKnown RBP eCLIP8.32□□□□□ -1.08
SNX13-213ENST00000611725 ATP10BO94823 1461 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 CCDC141Q6ZP82 1450 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 NOP58Q9Y2X3 529 aaKnown RBP8.31□□□□□ -1.08
SNX13-213ENST00000611725 PLEKHH2Q8IVE3 1493 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 CFAP70Q5T0N1 1121 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 EXOC6Q8TAG9 804 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 TCERG1O14776 1098 aaKnown RBP8.31□□□□□ -1.08
SNX13-213ENST00000611725 TRAK1Q9UPV9 953 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 RGS3P49796 1198 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 OSCARQ8IYS5 282 aa8.31□□□□□ -1.08
SNX13-213ENST00000611725 NUP160Q12769 1436 aa8.3□□□□□ -1.08
SNX13-213ENST00000611725 FRAT1Q92837 279 aaPredicted RBP8.3□□□□□ -1.08
SNX13-213ENST00000611725 MAGI3Q5TCQ9 1506 aa8.3□□□□□ -1.08
SNX13-213ENST00000611725 WDR62O43379 1518 aa8.29□□□□□ -1.08
SNX13-213ENST00000611725 ADAMTS12P58397 1594 aa8.29□□□□□ -1.08
SNX13-213ENST00000611725 ABCA5Q8WWZ7 1642 aa8.29□□□□□ -1.08
SNX13-213ENST00000611725 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
SNX13-213ENST00000611725 UPF2Q9HAU5 1272 aaKnown RBP8.29□□□□□ -1.08
SNX13-213ENST00000611725 ARHGAP5Q13017 1502 aa8.29□□□□□ -1.08
SNX13-213ENST00000611725 CDCA7LQ96GN5 454 aa8.29□□□□□ -1.08
SNX13-213ENST00000611725 SAMD9Q5K651 1589 aa8.29□□□□□ -1.08
SNX13-213ENST00000611725 ADAMTS8Q9UP79 889 aa8.29□□□□□ -1.08
SNX13-213ENST00000611725 APAF1O14727 1248 aa8.28□□□□□ -1.08
SNX13-213ENST00000611725 MAPK8IP3Q9UPT6 1336 aa8.28□□□□□ -1.08
SNX13-213ENST00000611725 U2SURPO15042 1029 aaKnown RBP8.28□□□□□ -1.08
SNX13-213ENST00000611725 PLIN1O60240 522 aa8.28□□□□□ -1.08
SNX13-213ENST00000611725 U2AF1L5P0DN76 240 aaPredicted RBP8.28□□□□□ -1.08
SNX13-213ENST00000611725 U2AF1Q01081 240 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNX13-213ENST00000611725 SCAPERQ9BY12 1400 aa8.28□□□□□ -1.08
SNX13-213ENST00000611725 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
SNX13-213ENST00000611725 STK26Q9P289 416 aa8.28□□□□□ -1.08
SNX13-213ENST00000611725 VGFO15240 615 aaPredicted RBP8.28□□□□□ -1.08
SNX13-213ENST00000611725 CCDC146Q8IYE0 955 aa8.27□□□□□ -1.08
SNX13-213ENST00000611725 NUTM2DQ5VT03 806 aaPredicted RBP8.27□□□□□ -1.09
SNX13-213ENST00000611725 PPM1GO15355 546 aaPredicted RBP8.27□□□□□ -1.09
SNX13-213ENST00000611725 PRDM2Q13029 1718 aa8.27□□□□□ -1.09
SNX13-213ENST00000611725 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
SNX13-213ENST00000611725 SMG6Q86US8 1419 aaKnown RBP8.27□□□□□ -1.09
SNX13-213ENST00000611725 NGEFQ8N5V2 710 aa8.26□□□□□ -1.09
SNX13-213ENST00000611725 PPP2R1AP30153 589 aa8.26□□□□□ -1.09
SNX13-213ENST00000611725 PZPP20742 1482 aa8.26□□□□□ -1.09
SNX13-213ENST00000611725 TEX14Q8IWB6 1497 aa8.25□□□□□ -1.09
SNX13-213ENST00000611725 BCL11AQ9H165 835 aa8.25□□□□□ -1.09
SNX13-213ENST00000611725 DDRGK1Q96HY6 314 aa8.25□□□□□ -1.09
SNX13-213ENST00000611725 KIAA0556O60303 1618 aa8.25□□□□□ -1.09
SNX13-213ENST00000611725 IPO9Q96P70 1041 aaKnown RBP8.24□□□□□ -1.09
SNX13-213ENST00000611725 MLECQ14165 292 aa8.24□□□□□ -1.09
SNX13-213ENST00000611725 TESK2Q96S53 571 aa8.24□□□□□ -1.09
SNX13-213ENST00000611725 SPATA31E1Q6ZUB1 1445 aa8.24□□□□□ -1.09
SNX13-213ENST00000611725 DHX29Q7Z478 1369 aaKnown RBP8.24□□□□□ -1.09
SNX13-213ENST00000611725 E9PSI1 815 aa8.23□□□□□ -1.09
SNX13-213ENST00000611725 PDE4AP27815 886 aa8.23□□□□□ -1.09
SNX13-213ENST00000611725 FTSJ3Q8IY81 847 aaKnown RBP8.23□□□□□ -1.09
SNX13-213ENST00000611725 TMEM132EQ6IEE7 984 aa8.23□□□□□ -1.09
SNX13-213ENST00000611725 TERF2IPQ9NYB0 399 aa8.23□□□□□ -1.09
SNX13-213ENST00000611725 ERBINQ96RT1 1412 aa8.23□□□□□ -1.09
SNX13-213ENST00000611725 CRBNQ96SW2 442 aa8.23□□□□□ -1.09
SNX13-213ENST00000611725 LAS1LQ9Y4W2 734 aaKnown RBP8.23□□□□□ -1.09
SNX13-213ENST00000611725 ADGRL2O95490 1459 aa8.22□□□□□ -1.09
SNX13-213ENST00000611725 CGNL1Q0VF96 1302 aa8.22□□□□□ -1.09
SNX13-213ENST00000611725 TARBP1Q13395 1621 aaKnown RBP8.22□□□□□ -1.09
SNX13-213ENST00000611725 RRP7AQ9Y3A4 280 aaKnown RBP8.22□□□□□ -1.09
SNX13-213ENST00000611725 PER1O15534 1290 aaPredicted RBP8.22□□□□□ -1.09
SNX13-213ENST00000611725 MS4A1P11836 297 aa8.22□□□□□ -1.09
SNX13-213ENST00000611725 HDGFL2Q7Z4V5 671 aaPredicted RBP8.22□□□□□ -1.09
SNX13-213ENST00000611725 CYB5RLQ6IPT4 315 aa8.21□□□□□ -1.09
SNX13-213ENST00000611725 EVC2Q86UK5 1308 aa8.21□□□□□ -1.09
SNX13-213ENST00000611725 SHANK2Q9UPX8 1470 aa8.21□□□□□ -1.09
SNX13-213ENST00000611725 MYH16Q9H6N6 1097 aa8.21□□□□□ -1.09
SNX13-213ENST00000611725 RALGAPBQ86X10 1494 aa8.21□□□□□ -1.09
SNX13-213ENST00000611725 CLUAP1Q96AJ1 413 aa8.21□□□□□ -1.1
SNX13-213ENST00000611725 SLC12A5Q9H2X9 1139 aa8.21□□□□□ -1.1
SNX13-213ENST00000611725 RAPGEF6Q8TEU7 1601 aa8.21□□□□□ -1.1
SNX13-213ENST00000611725 PLCH2O75038 1416 aa8.21□□□□□ -1.1
SNX13-213ENST00000611725 PLPPR3Q6T4P5 718 aa8.21□□□□□ -1.1
SNX13-213ENST00000611725 RAPGEF3O95398 923 aa8.2□□□□□ -1.1
SNX13-213ENST00000611725 RNF123Q5XPI4 1314 aa8.2□□□□□ -1.1
SNX13-213ENST00000611725 UHRF1BP1Q6BDS2 1440 aa8.2□□□□□ -1.1
SNX13-213ENST00000611725 CENPQQ7L2Z9 268 aaPredicted RBP8.2□□□□□ -1.1
SNX13-213ENST00000611725 MSH5O43196 834 aa8.19□□□□□ -1.1
SNX13-213ENST00000611725 PRAG1Q86YV5 1406 aa8.19□□□□□ -1.1
SNX13-213ENST00000611725 DISP3Q9P2K9 1392 aa8.19□□□□□ -1.1
SNX13-213ENST00000611725 ADGRF5Q8IZF2 1346 aa8.19□□□□□ -1.1
SNX13-213ENST00000611725 MBD5Q9P267 1494 aa8.19□□□□□ -1.1
SNX13-213ENST00000611725 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 KIF14Q15058 1648 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 MINK1Q8N4C8 1332 aaPredicted RBP8.18□□□□□ -1.1
SNX13-213ENST00000611725 KDM5BQ9UGL1 1544 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
SNX13-213ENST00000611725 BECN1Q14457 450 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 PARD3Q8TEW0 1356 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 BCL2L13Q9BXK5 485 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 PNNQ9H307 717 aaKnown RBP8.18□□□□□ -1.1
SNX13-213ENST00000611725 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 TRAPPC8Q9Y2L5 1435 aa8.18□□□□□ -1.1
SNX13-213ENST00000611725 DENND4BO75064 1496 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms