RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 PREX2Q70Z35 1606 aa11.84□□□□□ -0.51
CLK4-214ENST00000611575 CLIP1P30622 1438 aa11.84□□□□□ -0.51
CLK4-214ENST00000611575 C3P01024 1663 aa11.84□□□□□ -0.51
CLK4-214ENST00000611575 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
CLK4-214ENST00000611575 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
CLK4-214ENST00000611575 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
CLK4-214ENST00000611575 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
CLK4-214ENST00000611575 NPATQ14207 1427 aa11.82□□□□□ -0.52
CLK4-214ENST00000611575 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
CLK4-214ENST00000611575 KIDINS220Q9ULH0 1771 aa11.82□□□□□ -0.52
CLK4-214ENST00000611575 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
CLK4-214ENST00000611575 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
CLK4-214ENST00000611575 SOCS7O14512 581 aa11.8□□□□□ -0.52
CLK4-214ENST00000611575 CCDC18Q5T9S5 1454 aa11.8□□□□□ -0.52
CLK4-214ENST00000611575 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
CLK4-214ENST00000611575 SAMD9LQ8IVG5 1584 aa11.79□□□□□ -0.52
CLK4-214ENST00000611575 MROH2AA6NES4 1674 aa11.78□□□□□ -0.52
CLK4-214ENST00000611575 EVX2Q03828 476 aa11.78□□□□□ -0.52
CLK4-214ENST00000611575 DISP3Q9P2K9 1392 aa11.77□□□□□ -0.53
CLK4-214ENST00000611575 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.53
CLK4-214ENST00000611575 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
CLK4-214ENST00000611575 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
CLK4-214ENST00000611575 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
CLK4-214ENST00000611575 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
CLK4-214ENST00000611575 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
CLK4-214ENST00000611575 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
CLK4-214ENST00000611575 SPATA31D1Q6ZQQ2 1576 aa11.75□□□□□ -0.53
CLK4-214ENST00000611575 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
CLK4-214ENST00000611575 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
CLK4-214ENST00000611575 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
CLK4-214ENST00000611575 PTPRKQ15262 1439 aa11.74□□□□□ -0.53
CLK4-214ENST00000611575 CAMSAP1Q5T5Y3 1602 aa11.74□□□□□ -0.53
CLK4-214ENST00000611575 ZNF142P52746 1687 aaPredicted RBP11.74□□□□□ -0.53
CLK4-214ENST00000611575 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
CLK4-214ENST00000611575 SYCP2Q9BX26 1530 aa11.73□□□□□ -0.53
CLK4-214ENST00000611575 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
CLK4-214ENST00000611575 ATP7AQ04656 1500 aa11.71□□□□□ -0.53
CLK4-214ENST00000611575 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
CLK4-214ENST00000611575 A2MP01023 1474 aa11.7□□□□□ -0.54
CLK4-214ENST00000611575 MYO3AQ8NEV4 1616 aa11.7□□□□□ -0.54
CLK4-214ENST00000611575 PLEKHH2Q8IVE3 1493 aa11.7□□□□□ -0.54
CLK4-214ENST00000611575 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
CLK4-214ENST00000611575 CEP170BQ9Y4F5 1589 aaPredicted RBP11.69□□□□□ -0.54
CLK4-214ENST00000611575 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
CLK4-214ENST00000611575 ZNF335Q9H4Z2 1342 aaPredicted RBP11.68□□□□□ -0.54
CLK4-214ENST00000611575 PKD2Q13563 968 aa11.68□□□□□ -0.54
CLK4-214ENST00000611575 ESF1Q9H501 851 aaKnown RBP11.67□□□□□ -0.54
CLK4-214ENST00000611575 NCKAP5LQ9HCH0 1330 aa11.66□□□□□ -0.54
CLK4-214ENST00000611575 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
CLK4-214ENST00000611575 HNRNPMP52272 730 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLK4-214ENST00000611575 MYT1LQ9UL68 1186 aa11.66□□□□□ -0.54
CLK4-214ENST00000611575 RTEL1-TNFRSF6BF6WH68 1400 aa11.66□□□□□ -0.54
CLK4-214ENST00000611575 A2ML1A8K2U0 1454 aa11.65□□□□□ -0.54
CLK4-214ENST00000611575 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.55
CLK4-214ENST00000611575 CLTCQ00610 1675 aaKnown RBP11.65□□□□□ -0.55
CLK4-214ENST00000611575 NEURL4Q96JN8 1562 aa11.64□□□□□ -0.55
CLK4-214ENST00000611575 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
CLK4-214ENST00000611575 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
CLK4-214ENST00000611575 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
CLK4-214ENST00000611575 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
CLK4-214ENST00000611575 CFDP1Q9UEE9 299 aaPredicted RBP11.62□□□□□ -0.55
CLK4-214ENST00000611575 DHX29Q7Z478 1369 aaKnown RBP11.62□□□□□ -0.55
CLK4-214ENST00000611575 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
CLK4-214ENST00000611575 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
CLK4-214ENST00000611575 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
CLK4-214ENST00000611575 CCNB3Q8WWL7 1395 aa11.61□□□□□ -0.55
CLK4-214ENST00000611575 PZPP20742 1482 aa11.61□□□□□ -0.55
CLK4-214ENST00000611575 CPS1P31327 1500 aa11.6□□□□□ -0.55
CLK4-214ENST00000611575 MED14O60244 1454 aa11.6□□□□□ -0.55
CLK4-214ENST00000611575 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
CLK4-214ENST00000611575 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
CLK4-214ENST00000611575 UBAP1LF5GYI3 381 aa11.59□□□□□ -0.55
CLK4-214ENST00000611575 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
CLK4-214ENST00000611575 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.55
CLK4-214ENST00000611575 GGT6Q6P531 493 aa11.58□□□□□ -0.56
CLK4-214ENST00000611575 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
CLK4-214ENST00000611575 KDM5DQ9BY66 1539 aa11.58□□□□□ -0.56
CLK4-214ENST00000611575 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
CLK4-214ENST00000611575 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
CLK4-214ENST00000611575 TNRQ92752 1358 aa11.56□□□□□ -0.56
CLK4-214ENST00000611575 DEPDC5O75140 1603 aa11.56□□□□□ -0.56
CLK4-214ENST00000611575 NLRP1Q9C000 1473 aa11.56□□□□□ -0.56
CLK4-214ENST00000611575 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
CLK4-214ENST00000611575 MIA2Q96PC5 1412 aa11.55□□□□□ -0.56
CLK4-214ENST00000611575 CCDC141Q6ZP82 1450 aa11.55□□□□□ -0.56
CLK4-214ENST00000611575 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
CLK4-214ENST00000611575 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
CLK4-214ENST00000611575 POLR1AO95602 1720 aaPredicted RBP11.54□□□□□ -0.56
CLK4-214ENST00000611575 HSPA1LP34931 641 aa11.53□□□□□ -0.56
CLK4-214ENST00000611575 ARHGEF5Q12774 1597 aa11.53□□□□□ -0.56
CLK4-214ENST00000611575 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.57
CLK4-214ENST00000611575 CAMSAP2Q08AD1 1489 aa11.51□□□□□ -0.57
CLK4-214ENST00000611575 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
CLK4-214ENST00000611575 CREBZFQ9NS37 354 aa11.51□□□□□ -0.57
CLK4-214ENST00000611575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLK4-214ENST00000611575 NPHP4O75161 1426 aaPredicted RBP11.51□□□□□ -0.57
CLK4-214ENST00000611575 NCOA2Q15596 1464 aa11.51□□□□□ -0.57
CLK4-214ENST00000611575 UGGT1Q9NYU2 1555 aa11.5□□□□□ -0.57
CLK4-214ENST00000611575 TOM1O60784 492 aa11.5□□□□□ -0.57
CLK4-214ENST00000611575 KIF3BO15066 747 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms