RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 PRKRIP1Q9H875 184 aaPredicted RBP16.49■□□□□ 0.23
SRRT-213ENST00000611405 RTEL1-TNFRSF6BF6WH68 1400 aa16.49■□□□□ 0.23
SRRT-213ENST00000611405 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
SRRT-213ENST00000611405 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
SRRT-213ENST00000611405 PLA2R1Q13018 1463 aa16.47■□□□□ 0.23
SRRT-213ENST00000611405 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
SRRT-213ENST00000611405 SPAG9O60271 1321 aaKnown RBP16.47■□□□□ 0.23
SRRT-213ENST00000611405 ATP10AO60312 1499 aa16.46■□□□□ 0.23
SRRT-213ENST00000611405 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
SRRT-213ENST00000611405 ROCK2O75116 1388 aaKnown RBP16.43■□□□□ 0.22
SRRT-213ENST00000611405 ABCA9Q8IUA7 1624 aa16.43■□□□□ 0.22
SRRT-213ENST00000611405 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
SRRT-213ENST00000611405 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
SRRT-213ENST00000611405 FANCAO15360 1455 aa16.41■□□□□ 0.22
SRRT-213ENST00000611405 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
SRRT-213ENST00000611405 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
SRRT-213ENST00000611405 DHX29Q7Z478 1369 aaKnown RBP16.4■□□□□ 0.22
SRRT-213ENST00000611405 A2MP01023 1474 aa16.39■□□□□ 0.22
SRRT-213ENST00000611405 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
SRRT-213ENST00000611405 ASXL2Q76L83 1435 aa16.39■□□□□ 0.21
SRRT-213ENST00000611405 TRPM1Q7Z4N2 1603 aa16.38■□□□□ 0.21
SRRT-213ENST00000611405 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
SRRT-213ENST00000611405 MRS2Q9HD23 443 aa16.38■□□□□ 0.21
SRRT-213ENST00000611405 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
SRRT-213ENST00000611405 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
SRRT-213ENST00000611405 GPRASP1Q5JY77 1395 aa16.37■□□□□ 0.21
SRRT-213ENST00000611405 NEFLP07196 543 aa16.37■□□□□ 0.21
SRRT-213ENST00000611405 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
SRRT-213ENST00000611405 ATP7AQ04656 1500 aa16.36■□□□□ 0.21
SRRT-213ENST00000611405 INO80Q9ULG1 1556 aaPredicted RBP16.36■□□□□ 0.21
SRRT-213ENST00000611405 ADGRL1O94910 1474 aa16.36■□□□□ 0.21
SRRT-213ENST00000611405 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
SRRT-213ENST00000611405 LAMC1P11047 1609 aa16.35■□□□□ 0.21
SRRT-213ENST00000611405 EIF2AK4Q9P2K8 1649 aaKnown RBP16.35■□□□□ 0.21
SRRT-213ENST00000611405 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
SRRT-213ENST00000611405 FKBP8Q14318 412 aa16.35■□□□□ 0.21
SRRT-213ENST00000611405 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
SRRT-213ENST00000611405 KANK1Q14678 1352 aa16.33■□□□□ 0.2
SRRT-213ENST00000611405 PTPRTO14522 1441 aa16.32■□□□□ 0.2
SRRT-213ENST00000611405 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
SRRT-213ENST00000611405 E9PCH4 1651 aa16.31■□□□□ 0.2
SRRT-213ENST00000611405 TRPM2O94759 1503 aa16.31■□□□□ 0.2
SRRT-213ENST00000611405 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
SRRT-213ENST00000611405 VWDEQ8N2E2 1590 aa16.3■□□□□ 0.2
SRRT-213ENST00000611405 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
SRRT-213ENST00000611405 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
SRRT-213ENST00000611405 TET3O43151 1660 aa16.29■□□□□ 0.2
SRRT-213ENST00000611405 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
SRRT-213ENST00000611405 MYT1LQ9UL68 1186 aa16.29■□□□□ 0.2
SRRT-213ENST00000611405 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
SRRT-213ENST00000611405 MYT1Q01538 1121 aa16.28■□□□□ 0.2
SRRT-213ENST00000611405 ZBED9Q6R2W3 1325 aa16.27■□□□□ 0.2
SRRT-213ENST00000611405 KIF3BO15066 747 aa16.27■□□□□ 0.19
SRRT-213ENST00000611405 SPHKAPQ2M3C7 1700 aa16.26■□□□□ 0.19
SRRT-213ENST00000611405 ZNF518AQ6AHZ1 1483 aa16.26■□□□□ 0.19
SRRT-213ENST00000611405 CFAP74Q9C0B2 1584 aa16.25■□□□□ 0.19
SRRT-213ENST00000611405 RALBP1Q15311 655 aa16.25■□□□□ 0.19
SRRT-213ENST00000611405 CEP152O94986 1710 aa16.24■□□□□ 0.19
SRRT-213ENST00000611405 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
SRRT-213ENST00000611405 COL17A1Q9UMD9 1497 aaPredicted RBP16.24■□□□□ 0.19
SRRT-213ENST00000611405 RNF17Q9BXT8 1623 aaKnown RBP16.24■□□□□ 0.19
SRRT-213ENST00000611405 TESK2Q96S53 571 aa16.23■□□□□ 0.19
SRRT-213ENST00000611405 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
SRRT-213ENST00000611405 BCANQ96GW7 911 aa16.23■□□□□ 0.19
SRRT-213ENST00000611405 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
SRRT-213ENST00000611405 MROH1Q8NDA8 1641 aa16.23■□□□□ 0.19
SRRT-213ENST00000611405 NEURL4Q96JN8 1562 aa16.22■□□□□ 0.19
SRRT-213ENST00000611405 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
SRRT-213ENST00000611405 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.19
SRRT-213ENST00000611405 TMF1P82094 1093 aa16.2■□□□□ 0.18
SRRT-213ENST00000611405 CNGB1Q14028 1251 aaPredicted RBP16.2■□□□□ 0.18
SRRT-213ENST00000611405 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
SRRT-213ENST00000611405 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
SRRT-213ENST00000611405 POGZQ7Z3K3 1410 aa16.2■□□□□ 0.18
SRRT-213ENST00000611405 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
SRRT-213ENST00000611405 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
SRRT-213ENST00000611405 DISP3Q9P2K9 1392 aa16.19■□□□□ 0.18
SRRT-213ENST00000611405 MLH3Q9UHC1 1453 aa16.19■□□□□ 0.18
SRRT-213ENST00000611405 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
SRRT-213ENST00000611405 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
SRRT-213ENST00000611405 PER1O15534 1290 aaPredicted RBP16.16■□□□□ 0.18
SRRT-213ENST00000611405 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
SRRT-213ENST00000611405 PARD3Q8TEW0 1356 aa16.16■□□□□ 0.18
SRRT-213ENST00000611405 IQGAP1P46940 1657 aa16.15■□□□□ 0.18
SRRT-213ENST00000611405 NEO1Q92859 1461 aa16.15■□□□□ 0.18
SRRT-213ENST00000611405 SCAF11Q99590 1463 aaKnown RBP16.15■□□□□ 0.18
SRRT-213ENST00000611405 HECW2Q9P2P5 1572 aa16.14■□□□□ 0.17
SRRT-213ENST00000611405 LRPPRCP42704 1394 aaKnown RBP16.14■□□□□ 0.17
SRRT-213ENST00000611405 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
SRRT-213ENST00000611405 MYOM2P54296 1465 aa16.13■□□□□ 0.17
SRRT-213ENST00000611405 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
SRRT-213ENST00000611405 NLRP13Q86W25 1043 aa16.13■□□□□ 0.17
SRRT-213ENST00000611405 SMG6Q86US8 1419 aaKnown RBP16.12■□□□□ 0.17
SRRT-213ENST00000611405 CDCA8Q53HL2 280 aa16.12■□□□□ 0.17
SRRT-213ENST00000611405 PANK3Q9H999 370 aa16.12■□□□□ 0.17
SRRT-213ENST00000611405 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
SRRT-213ENST00000611405 TSHZ2Q9NRE2 1034 aa16.11■□□□□ 0.17
SRRT-213ENST00000611405 EIF3AQ14152 1382 aaKnown RBP16.11■□□□□ 0.17
SRRT-213ENST00000611405 KIF1BO60333 1816 aa16.1■□□□□ 0.17
SRRT-213ENST00000611405 PRKCSHP14314 528 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms