RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 FAM69CQ0P6D2 419 aa22.12■■□□□ 1.13
RTN1-209ENST00000611068 NBPF8Q3BBV2 869 aa22.12■■□□□ 1.13
RTN1-209ENST00000611068 KDM2AQ9Y2K7 1162 aa22.11■■□□□ 1.13
RTN1-209ENST00000611068 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.11■■□□□ 1.13
RTN1-209ENST00000611068 KIF3BO15066 747 aa22.1■■□□□ 1.13
RTN1-209ENST00000611068 RPRD2Q5VT52 1461 aaKnown RBP22.1■■□□□ 1.13
RTN1-209ENST00000611068 DDX10Q13206 875 aaKnown RBP22.09■■□□□ 1.13
RTN1-209ENST00000611068 MAST1Q9Y2H9 1570 aa22.09■■□□□ 1.13
RTN1-209ENST00000611068 RGL3Q3MIN7 710 aa22.09■■□□□ 1.13
RTN1-209ENST00000611068 ERICH6BQ5W0A0 696 aa22.09■■□□□ 1.13
RTN1-209ENST00000611068 FAM135AQ9P2D6 1515 aa22.08■■□□□ 1.12
RTN1-209ENST00000611068 ARAP3Q8WWN8 1544 aa22.06■■□□□ 1.12
RTN1-209ENST00000611068 DUOX2Q9NRD8 1548 aa22.05■■□□□ 1.12
RTN1-209ENST00000611068 NEFLP07196 543 aa22.05■■□□□ 1.12
RTN1-209ENST00000611068 ZFYVE16Q7Z3T8 1539 aa22.04■■□□□ 1.12
RTN1-209ENST00000611068 PLXNC1O60486 1568 aa22.03■■□□□ 1.12
RTN1-209ENST00000611068 IL27Q8NEV9 243 aa22.02■■□□□ 1.12
RTN1-209ENST00000611068 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
RTN1-209ENST00000611068 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
RTN1-209ENST00000611068 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
RTN1-209ENST00000611068 RTN4Q9NQC3 1192 aaKnown RBP22■■□□□ 1.11
RTN1-209ENST00000611068 TEX14Q8IWB6 1497 aa22■■□□□ 1.11
RTN1-209ENST00000611068 ERBINQ96RT1 1412 aa21.99■■□□□ 1.11
RTN1-209ENST00000611068 RTEL1-TNFRSF6BF6WH68 1400 aa21.99■■□□□ 1.11
RTN1-209ENST00000611068 NBR1Q14596 966 aa21.98■■□□□ 1.11
RTN1-209ENST00000611068 GGT6Q6P531 493 aa21.98■■□□□ 1.11
RTN1-209ENST00000611068 KDM5DQ9BY66 1539 aa21.97■■□□□ 1.11
RTN1-209ENST00000611068 ZNF518AQ6AHZ1 1483 aa21.95■■□□□ 1.1
RTN1-209ENST00000611068 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
RTN1-209ENST00000611068 UNC13BO14795 1591 aa21.94■■□□□ 1.1
RTN1-209ENST00000611068 DHX29Q7Z478 1369 aaKnown RBP21.93■■□□□ 1.1
RTN1-209ENST00000611068 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
RTN1-209ENST00000611068 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
RTN1-209ENST00000611068 INO80Q9ULG1 1556 aaPredicted RBP21.93■■□□□ 1.1
RTN1-209ENST00000611068 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
RTN1-209ENST00000611068 CCDC144AA2RUR9 1427 aa21.92■■□□□ 1.1
RTN1-209ENST00000611068 KIDINS220Q9ULH0 1771 aa21.91■■□□□ 1.1
RTN1-209ENST00000611068 C11orf95C9JLR9 678 aaPredicted RBP21.88■■□□□ 1.09
RTN1-209ENST00000611068 IQGAP3Q86VI3 1631 aa21.88■■□□□ 1.09
RTN1-209ENST00000611068 POLR3GLQ9BT43 218 aa21.87■■□□□ 1.09
RTN1-209ENST00000611068 KANK1Q14678 1352 aa21.85■■□□□ 1.09
RTN1-209ENST00000611068 A2MP01023 1474 aa21.85■■□□□ 1.09
RTN1-209ENST00000611068 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
RTN1-209ENST00000611068 YEATS2Q9ULM3 1422 aa21.83■■□□□ 1.09
RTN1-209ENST00000611068 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.09
RTN1-209ENST00000611068 NEO1Q92859 1461 aa21.83■■□□□ 1.09
RTN1-209ENST00000611068 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.08
RTN1-209ENST00000611068 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
RTN1-209ENST00000611068 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
RTN1-209ENST00000611068 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
RTN1-209ENST00000611068 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
RTN1-209ENST00000611068 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
RTN1-209ENST00000611068 WASHC2CQ9Y4E1 1318 aa21.79■■□□□ 1.08
RTN1-209ENST00000611068 PAK3O75914 559 aaPredicted RBP21.79■■□□□ 1.08
RTN1-209ENST00000611068 KDM5CP41229 1560 aa21.79■■□□□ 1.08
RTN1-209ENST00000611068 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
RTN1-209ENST00000611068 E9PCH4 1651 aa21.79■■□□□ 1.08
RTN1-209ENST00000611068 HECW2Q9P2P5 1572 aa21.79■■□□□ 1.08
RTN1-209ENST00000611068 MLH3Q9UHC1 1453 aa21.79■■□□□ 1.08
RTN1-209ENST00000611068 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
RTN1-209ENST00000611068 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
RTN1-209ENST00000611068 ABCA6Q8N139 1617 aa21.77■■□□□ 1.08
RTN1-209ENST00000611068 FRMPD1Q5SYB0 1578 aa21.76■■□□□ 1.07
RTN1-209ENST00000611068 MLECQ14165 292 aa21.76■■□□□ 1.07
RTN1-209ENST00000611068 ATP10AO60312 1499 aa21.75■■□□□ 1.07
RTN1-209ENST00000611068 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
RTN1-209ENST00000611068 GLI2P10070 1586 aa21.75■■□□□ 1.07
RTN1-209ENST00000611068 EIF5BO60841 1220 aaKnown RBP21.75■■□□□ 1.07
RTN1-209ENST00000611068 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
RTN1-209ENST00000611068 MROH1Q8NDA8 1641 aa21.74■■□□□ 1.07
RTN1-209ENST00000611068 USP47Q96K76 1375 aa21.74■■□□□ 1.07
RTN1-209ENST00000611068 IRX6P78412 446 aaPredicted RBP21.74■■□□□ 1.07
RTN1-209ENST00000611068 DEPDC5O75140 1603 aa21.73■■□□□ 1.07
RTN1-209ENST00000611068 ROCK2O75116 1388 aaKnown RBP21.72■■□□□ 1.07
RTN1-209ENST00000611068 PKNOX2Q96KN3 472 aa21.72■■□□□ 1.07
RTN1-209ENST00000611068 RICTORQ6R327 1708 aa21.71■■□□□ 1.07
RTN1-209ENST00000611068 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
RTN1-209ENST00000611068 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
RTN1-209ENST00000611068 CEP152O94986 1710 aa21.69■■□□□ 1.06
RTN1-209ENST00000611068 PRDM15P57071 1507 aaPredicted RBP21.69■■□□□ 1.06
RTN1-209ENST00000611068 SPATA31E1Q6ZUB1 1445 aa21.68■■□□□ 1.06
RTN1-209ENST00000611068 COL17A1Q9UMD9 1497 aaPredicted RBP21.68■■□□□ 1.06
RTN1-209ENST00000611068 DIP2CQ9Y2E4 1556 aa21.68■■□□□ 1.06
RTN1-209ENST00000611068 NUTM2DQ5VT03 806 aaPredicted RBP21.68■■□□□ 1.06
RTN1-209ENST00000611068 KIF7Q2M1P5 1343 aa21.68■■□□□ 1.06
RTN1-209ENST00000611068 PPRC1Q5VV67 1664 aaKnown RBP21.68■■□□□ 1.06
RTN1-209ENST00000611068 TET3O43151 1660 aa21.67■■□□□ 1.06
RTN1-209ENST00000611068 UHRF1BP1Q6BDS2 1440 aa21.67■■□□□ 1.06
RTN1-209ENST00000611068 ANP32CO43423 234 aa21.67■■□□□ 1.06
RTN1-209ENST00000611068 EIF2AK4Q9P2K8 1649 aaKnown RBP21.67■■□□□ 1.06
RTN1-209ENST00000611068 VWDEQ8N2E2 1590 aa21.67■■□□□ 1.06
RTN1-209ENST00000611068 PRAG1Q86YV5 1406 aa21.66■■□□□ 1.06
RTN1-209ENST00000611068 CLTCL1P53675 1640 aa21.65■■□□□ 1.06
RTN1-209ENST00000611068 CCDC7Q96M83 1385 aa21.65■■□□□ 1.06
RTN1-209ENST00000611068 PTPRTO14522 1441 aa21.64■■□□□ 1.06
RTN1-209ENST00000611068 NPATQ14207 1427 aa21.63■■□□□ 1.05
RTN1-209ENST00000611068 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
RTN1-209ENST00000611068 KIF13AQ9H1H9 1805 aa21.63■■□□□ 1.05
RTN1-209ENST00000611068 RALGAPBQ86X10 1494 aa21.63■■□□□ 1.05
RTN1-209ENST00000611068 TRPM2O94759 1503 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms