RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ASXL2Q76L83 1435 aa18.93■□□□□ 0.62
NEK3-205ENST00000610828 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
NEK3-205ENST00000610828 MAGI2Q86UL8 1455 aa18.91■□□□□ 0.62
NEK3-205ENST00000610828 KDM5CP41229 1560 aa18.91■□□□□ 0.62
NEK3-205ENST00000610828 CARD11Q9BXL7 1154 aa18.91■□□□□ 0.62
NEK3-205ENST00000610828 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
NEK3-205ENST00000610828 PLA2R1Q13018 1463 aa18.9■□□□□ 0.62
NEK3-205ENST00000610828 ZFYVE16Q7Z3T8 1539 aa18.9■□□□□ 0.62
NEK3-205ENST00000610828 RGL3Q3MIN7 710 aa18.89■□□□□ 0.61
NEK3-205ENST00000610828 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
NEK3-205ENST00000610828 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
NEK3-205ENST00000610828 POLR3GLQ9BT43 218 aa18.86■□□□□ 0.61
NEK3-205ENST00000610828 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
NEK3-205ENST00000610828 PELP1Q8IZL8 1130 aaKnown RBP18.85■□□□□ 0.61
NEK3-205ENST00000610828 MYT1LQ9UL68 1186 aa18.85■□□□□ 0.61
NEK3-205ENST00000610828 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
NEK3-205ENST00000610828 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
NEK3-205ENST00000610828 ROCK2O75116 1388 aaKnown RBP18.84■□□□□ 0.61
NEK3-205ENST00000610828 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
NEK3-205ENST00000610828 ATP10AO60312 1499 aa18.83■□□□□ 0.6
NEK3-205ENST00000610828 INO80Q9ULG1 1556 aaPredicted RBP18.82■□□□□ 0.6
NEK3-205ENST00000610828 PRAG1Q86YV5 1406 aa18.82■□□□□ 0.6
NEK3-205ENST00000610828 A2MP01023 1474 aa18.81■□□□□ 0.6
NEK3-205ENST00000610828 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
NEK3-205ENST00000610828 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
NEK3-205ENST00000610828 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
NEK3-205ENST00000610828 TRPM1Q7Z4N2 1603 aa18.79■□□□□ 0.6
NEK3-205ENST00000610828 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
NEK3-205ENST00000610828 E9PCH4 1651 aa18.78■□□□□ 0.6
NEK3-205ENST00000610828 DEPDC5O75140 1603 aa18.77■□□□□ 0.6
NEK3-205ENST00000610828 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
NEK3-205ENST00000610828 KIF3BO15066 747 aa18.76■□□□□ 0.59
NEK3-205ENST00000610828 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
NEK3-205ENST00000610828 KANK1Q14678 1352 aa18.75■□□□□ 0.59
NEK3-205ENST00000610828 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
NEK3-205ENST00000610828 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
NEK3-205ENST00000610828 CD109Q6YHK3 1445 aa18.74■□□□□ 0.59
NEK3-205ENST00000610828 CNGB1Q14028 1251 aaPredicted RBP18.73■□□□□ 0.59
NEK3-205ENST00000610828 ZNF518AQ6AHZ1 1483 aa18.73■□□□□ 0.59
NEK3-205ENST00000610828 TET3O43151 1660 aa18.72■□□□□ 0.59
NEK3-205ENST00000610828 TRPM2O94759 1503 aa18.71■□□□□ 0.59
NEK3-205ENST00000610828 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.59
NEK3-205ENST00000610828 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
NEK3-205ENST00000610828 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
NEK3-205ENST00000610828 GPRASP1Q5JY77 1395 aa18.71■□□□□ 0.59
NEK3-205ENST00000610828 KIDINS220Q9ULH0 1771 aa18.71■□□□□ 0.59
NEK3-205ENST00000610828 VWDEQ8N2E2 1590 aa18.69■□□□□ 0.58
NEK3-205ENST00000610828 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
NEK3-205ENST00000610828 PRDM15P57071 1507 aaPredicted RBP18.69■□□□□ 0.58
NEK3-205ENST00000610828 PTPRTO14522 1441 aa18.68■□□□□ 0.58
NEK3-205ENST00000610828 LAMC1P11047 1609 aa18.67■□□□□ 0.58
NEK3-205ENST00000610828 CLTCL1P53675 1640 aa18.66■□□□□ 0.58
NEK3-205ENST00000610828 MROH1Q8NDA8 1641 aa18.66■□□□□ 0.58
NEK3-205ENST00000610828 CEP152O94986 1710 aa18.66■□□□□ 0.58
NEK3-205ENST00000610828 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
NEK3-205ENST00000610828 FKBP8Q14318 412 aa18.64■□□□□ 0.58
NEK3-205ENST00000610828 NEFLP07196 543 aa18.62■□□□□ 0.57
NEK3-205ENST00000610828 MADDQ8WXG6 1647 aa18.61■□□□□ 0.57
NEK3-205ENST00000610828 RNF17Q9BXT8 1623 aaKnown RBP18.61■□□□□ 0.57
NEK3-205ENST00000610828 TESK2Q96S53 571 aa18.6■□□□□ 0.57
NEK3-205ENST00000610828 EFCAB6Q5THR3 1501 aa18.6■□□□□ 0.57
NEK3-205ENST00000610828 MLH3Q9UHC1 1453 aa18.6■□□□□ 0.57
NEK3-205ENST00000610828 HECW2Q9P2P5 1572 aa18.6■□□□□ 0.57
NEK3-205ENST00000610828 COL17A1Q9UMD9 1497 aaPredicted RBP18.59■□□□□ 0.57
NEK3-205ENST00000610828 BCANQ96GW7 911 aa18.59■□□□□ 0.57
NEK3-205ENST00000610828 STAC3Q96MF2 364 aa18.59■□□□□ 0.57
NEK3-205ENST00000610828 DISP3Q9P2K9 1392 aa18.58■□□□□ 0.57
NEK3-205ENST00000610828 UGGT1Q9NYU2 1555 aa18.58■□□□□ 0.56
NEK3-205ENST00000610828 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
NEK3-205ENST00000610828 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
NEK3-205ENST00000610828 NEO1Q92859 1461 aa18.57■□□□□ 0.56
NEK3-205ENST00000610828 RAPGEF3O95398 923 aa18.57■□□□□ 0.56
NEK3-205ENST00000610828 FRMPD1Q5SYB0 1578 aa18.57■□□□□ 0.56
NEK3-205ENST00000610828 GGT6Q6P531 493 aa18.56■□□□□ 0.56
NEK3-205ENST00000610828 TMF1P82094 1093 aa18.56■□□□□ 0.56
NEK3-205ENST00000610828 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
NEK3-205ENST00000610828 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
NEK3-205ENST00000610828 ABCA6Q8N139 1617 aa18.54■□□□□ 0.56
NEK3-205ENST00000610828 TMC1Q8TDI8 760 aa18.54■□□□□ 0.56
NEK3-205ENST00000610828 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
NEK3-205ENST00000610828 RALBP1Q15311 655 aa18.53■□□□□ 0.56
NEK3-205ENST00000610828 KIF1BO60333 1816 aa18.53■□□□□ 0.56
NEK3-205ENST00000610828 NEURL4Q96JN8 1562 aa18.53■□□□□ 0.56
NEK3-205ENST00000610828 IQGAP1P46940 1657 aa18.52■□□□□ 0.56
NEK3-205ENST00000610828 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
NEK3-205ENST00000610828 SCAF11Q99590 1463 aaKnown RBP18.5■□□□□ 0.55
NEK3-205ENST00000610828 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
NEK3-205ENST00000610828 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
NEK3-205ENST00000610828 NPATQ14207 1427 aa18.49■□□□□ 0.55
NEK3-205ENST00000610828 PNISRQ8TF01 805 aaKnown RBP18.49■□□□□ 0.55
NEK3-205ENST00000610828 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
NEK3-205ENST00000610828 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
NEK3-205ENST00000610828 BRD4O60885 1362 aaPredicted RBP18.48■□□□□ 0.55
NEK3-205ENST00000610828 PANK3Q9H999 370 aa18.48■□□□□ 0.55
NEK3-205ENST00000610828 MROH2AA6NES4 1674 aa18.47■□□□□ 0.55
NEK3-205ENST00000610828 CHGAP10645 457 aaKnown RBP18.47■□□□□ 0.55
NEK3-205ENST00000610828 MYOM2P54296 1465 aa18.47■□□□□ 0.55
NEK3-205ENST00000610828 ADGRF5Q8IZF2 1346 aa18.47■□□□□ 0.55
NEK3-205ENST00000610828 KIAA1210Q9ULL0 1709 aa18.46■□□□□ 0.55
NEK3-205ENST00000610828 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms