RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 KIF15Q9NS87 1388 aa29.76■■■□□ 2.35
TCF3-219ENST00000610756 DNMT1P26358 1616 aaKnown RBP29.75■■■□□ 2.35
TCF3-219ENST00000610756 CHIC2Q9UKJ5 165 aa29.75■■■□□ 2.35
TCF3-219ENST00000610756 DUOX2Q9NRD8 1548 aa29.75■■■□□ 2.35
TCF3-219ENST00000610756 FAM135AQ9P2D6 1515 aa29.75■■■□□ 2.35
TCF3-219ENST00000610756 ANKRD30AQ9BXX3 1397 aa29.72■■■□□ 2.35
TCF3-219ENST00000610756 KDM5DQ9BY66 1539 aa29.71■■■□□ 2.35
TCF3-219ENST00000610756 PPARGC1BQ86YN6 1023 aaKnown RBP29.71■■■□□ 2.35
TCF3-219ENST00000610756 NCOA1Q15788 1441 aa29.7■■■□□ 2.34
TCF3-219ENST00000610756 CROCC2H7BZ55 1655 aa29.69■■■□□ 2.34
TCF3-219ENST00000610756 FBXO31Q5XUX0 539 aaPredicted RBP29.69■■■□□ 2.34
TCF3-219ENST00000610756 EIF2AK4Q9P2K8 1649 aaKnown RBP29.68■■■□□ 2.34
TCF3-219ENST00000610756 ERBINQ96RT1 1412 aa29.68■■■□□ 2.34
TCF3-219ENST00000610756 DMRT2Q9Y5R5 561 aa29.68■■■□□ 2.34
TCF3-219ENST00000610756 RNF17Q9BXT8 1623 aaKnown RBP29.66■■■□□ 2.34
TCF3-219ENST00000610756 PZPP20742 1482 aa29.64■■■□□ 2.34
TCF3-219ENST00000610756 ADGRL2O95490 1459 aa29.61■■■□□ 2.33
TCF3-219ENST00000610756 ABCC3O15438 1527 aa29.59■■■□□ 2.33
TCF3-219ENST00000610756 TNRQ92752 1358 aa29.59■■■□□ 2.33
TCF3-219ENST00000610756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.58■■■□□ 2.334e-6■□□□□ 8.2
TCF3-219ENST00000610756 MROH1Q8NDA8 1641 aa29.57■■■□□ 2.32
TCF3-219ENST00000610756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.56■■■□□ 2.32
TCF3-219ENST00000610756 STRCQ7RTU9 1775 aa29.54■■■□□ 2.32
TCF3-219ENST00000610756 KANK1Q14678 1352 aa29.53■■■□□ 2.32
TCF3-219ENST00000610756 MYO3AQ8NEV4 1616 aa29.52■■■□□ 2.32
TCF3-219ENST00000610756 A2ML1A8K2U0 1454 aa29.52■■■□□ 2.32
TCF3-219ENST00000610756 ZC3H13Q5T200 1668 aaKnown RBP29.52■■■□□ 2.32
TCF3-219ENST00000610756 CEP170BQ9Y4F5 1589 aaPredicted RBP29.52■■■□□ 2.32
TCF3-219ENST00000610756 PTPRTO14522 1441 aa29.51■■■□□ 2.32
TCF3-219ENST00000610756 PRDM15P57071 1507 aaPredicted RBP29.51■■■□□ 2.31
TCF3-219ENST00000610756 CAMSAP1Q5T5Y3 1602 aa29.5■■■□□ 2.31
TCF3-219ENST00000610756 ANKRD50Q9ULJ7 1429 aa29.5■■■□□ 2.31
TCF3-219ENST00000610756 PKD2Q13563 968 aa29.49■■■□□ 2.31
TCF3-219ENST00000610756 ROCK1Q13464 1354 aa29.49■■■□□ 2.31
TCF3-219ENST00000610756 ARHGAP31Q2M1Z3 1444 aa29.49■■■□□ 2.31
TCF3-219ENST00000610756 ILDR1Q86SU0 546 aaPredicted RBP29.48■■■□□ 2.31
TCF3-219ENST00000610756 ZNF142P52746 1687 aaPredicted RBP29.48■■■□□ 2.31
TCF3-219ENST00000610756 NCKAP5LQ9HCH0 1330 aa29.47■■■□□ 2.31
TCF3-219ENST00000610756 PLA2R1Q13018 1463 aa29.47■■■□□ 2.31
TCF3-219ENST00000610756 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
TCF3-219ENST00000610756 NLRP1Q9C000 1473 aa29.46■■■□□ 2.31
TCF3-219ENST00000610756 DEPDC5O75140 1603 aa29.46■■■□□ 2.31
TCF3-219ENST00000610756 ITGAEP38570 1179 aa29.45■■■□□ 2.31
TCF3-219ENST00000610756 SPATA31D1Q6ZQQ2 1576 aa29.43■■■□□ 2.3
TCF3-219ENST00000610756 ERVK-7P63135 1459 aa29.43■■■□□ 2.3
TCF3-219ENST00000610756 RRBP1Q9P2E9 1410 aaKnown RBP29.42■■■□□ 2.3
TCF3-219ENST00000610756 LMTK2Q8IWU2 1503 aa29.41■■■□□ 2.3
TCF3-219ENST00000610756 VWDEQ8N2E2 1590 aa29.4■■■□□ 2.3
TCF3-219ENST00000610756 CEP152O94986 1710 aa29.4■■■□□ 2.3
TCF3-219ENST00000610756 CERKQ8TCT0 537 aa29.39■■■□□ 2.3
TCF3-219ENST00000610756 FBXO41Q8TF61 875 aa29.38■■■□□ 2.29
TCF3-219ENST00000610756 ANKLE2Q86XL3 938 aa29.36■■■□□ 2.29
TCF3-219ENST00000610756 UGGT1Q9NYU2 1555 aa29.34■■■□□ 2.29
TCF3-219ENST00000610756 CFAP65Q6ZU64 1925 aaKnown RBP29.27■■■□□ 2.28
TCF3-219ENST00000610756 IDI1Q13907 227 aa29.26■■■□□ 2.27
TCF3-219ENST00000610756 NOS1P29475 1434 aa29.25■■■□□ 2.27
TCF3-219ENST00000610756 EFCAB6Q5THR3 1501 aa29.24■■■□□ 2.27
TCF3-219ENST00000610756 SLC52A1Q9NWF4 448 aa29.23■■■□□ 2.27
TCF3-219ENST00000610756 RPRD2Q5VT52 1461 aaKnown RBP29.23■■■□□ 2.27
TCF3-219ENST00000610756 NUP155O75694 1391 aa29.22■■■□□ 2.27
TCF3-219ENST00000610756 UNC13BO14795 1591 aa29.21■■■□□ 2.27
TCF3-219ENST00000610756 ZNF335Q9H4Z2 1342 aaPredicted RBP29.2■■■□□ 2.27
TCF3-219ENST00000610756 LTBP4Q8N2S1 1624 aa29.2■■■□□ 2.27
TCF3-219ENST00000610756 MED14O60244 1454 aa29.2■■■□□ 2.26
TCF3-219ENST00000610756 STAG3Q9UJ98 1225 aa29.2■■■□□ 2.26
TCF3-219ENST00000610756 NEURL4Q96JN8 1562 aa29.17■■■□□ 2.26
TCF3-219ENST00000610756 TXNDC2Q86VQ3 553 aa29.16■■■□□ 2.26
TCF3-219ENST00000610756 UBR1Q8IWV7 1749 aa29.15■■■□□ 2.26
TCF3-219ENST00000610756 NPHP4O75161 1426 aaPredicted RBP29.15■■■□□ 2.26
TCF3-219ENST00000610756 NAIPQ13075 1403 aa29.15■■■□□ 2.26
TCF3-219ENST00000610756 LTKP29376 864 aa29.15■■■□□ 2.26
TCF3-219ENST00000610756 TET3O43151 1660 aa29.15■■■□□ 2.26
TCF3-219ENST00000610756 ARHGAP23Q9P227 1491 aa29.14■■■□□ 2.25
TCF3-219ENST00000610756 EID1Q9Y6B2 187 aa29.14■■■□□ 2.25
TCF3-219ENST00000610756 SYNMO15061 1565 aa29.13■■■□□ 2.25
TCF3-219ENST00000610756 POLR1AO95602 1720 aaPredicted RBP29.13■■■□□ 2.25
TCF3-219ENST00000610756 TMEM2Q9UHN6 1383 aa29.12■■■□□ 2.25
TCF3-219ENST00000610756 SLIT1O75093 1534 aa29.12■■■□□ 2.25
TCF3-219ENST00000610756 IQGAP3Q86VI3 1631 aa29.11■■■□□ 2.25
TCF3-219ENST00000610756 PIK3C2BO00750 1634 aa29.1■■■□□ 2.25
TCF3-219ENST00000610756 SCAF11Q99590 1463 aaKnown RBP29.09■■■□□ 2.25
TCF3-219ENST00000610756 HFM1A2PYH4 1435 aa29.08■■■□□ 2.25
TCF3-219ENST00000610756 GCC2Q8IWJ2 1684 aa29.07■■■□□ 2.24
TCF3-219ENST00000610756 IQSEC2Q5JU85 1478 aa29.07■■■□□ 2.24
TCF3-219ENST00000610756 KDM5AP29375 1690 aaKnown RBP29.06■■■□□ 2.24
TCF3-219ENST00000610756 E9PCH4 1651 aa29.02■■■□□ 2.24
TCF3-219ENST00000610756 IQGAP1P46940 1657 aa29.01■■■□□ 2.23
TCF3-219ENST00000610756 ADGRB3O60242 1522 aa28.99■■■□□ 2.23
TCF3-219ENST00000610756 HDGFP51858 240 aaKnown RBP28.99■■■□□ 2.23
TCF3-219ENST00000610756 TRIM52Q96A61 297 aa28.98■■■□□ 2.23
TCF3-219ENST00000610756 CPS1P31327 1500 aa28.97■■■□□ 2.23
TCF3-219ENST00000610756 CHGAP10645 457 aaKnown RBP28.94■■■□□ 2.22
TCF3-219ENST00000610756 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.92■■■□□ 2.22
TCF3-219ENST00000610756 TMEM131LA2VDJ0 1609 aa28.91■■■□□ 2.22
TCF3-219ENST00000610756 ZFYVE9O95405 1425 aa28.9■■■□□ 2.22
TCF3-219ENST00000610756 SLC4A1APQ9BWU0 796 aaKnown RBP28.9■■■□□ 2.22
TCF3-219ENST00000610756 UBAP1LF5GYI3 381 aa28.89■■■□□ 2.21
TCF3-219ENST00000610756 RIMS2Q9UQ26 1411 aa28.89■■■□□ 2.21
TCF3-219ENST00000610756 SLC26A8Q96RN1 970 aa28.88■■■□□ 2.21
TCF3-219ENST00000610756 PPP1R15AO75807 674 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms