RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SPAG9O60271 1321 aaKnown RBP39.09■■■■□ 3.85
CSPG5-205ENST00000610462 CCDC144AA2RUR9 1427 aa39.09■■■■□ 3.85
CSPG5-205ENST00000610462 USP47Q96K76 1375 aa39.08■■■■□ 3.85
CSPG5-205ENST00000610462 PLA2R1Q13018 1463 aa39.07■■■■□ 3.85
CSPG5-205ENST00000610462 KIF7Q2M1P5 1343 aa39.05■■■■□ 3.84
CSPG5-205ENST00000610462 AFAP1Q8N556 730 aa39.03■■■■□ 3.84
CSPG5-205ENST00000610462 BCORL1Q5H9F3 1711 aa39.01■■■■□ 3.84
CSPG5-205ENST00000610462 INO80Q9ULG1 1556 aaPredicted RBP39.01■■■■□ 3.84
CSPG5-205ENST00000610462 ATP10AO60312 1499 aa39.01■■■■□ 3.84
CSPG5-205ENST00000610462 DCAF11Q8TEB1 546 aa39.01■■■■□ 3.83
CSPG5-205ENST00000610462 KDM2AQ9Y2K7 1162 aa38.98■■■■□ 3.83
CSPG5-205ENST00000610462 ATP7AQ04656 1500 aa38.97■■■■□ 3.83
CSPG5-205ENST00000610462 ADGRL1O94910 1474 aa38.96■■■■□ 3.83
CSPG5-205ENST00000610462 DEPDC5O75140 1603 aa38.94■■■■□ 3.82
CSPG5-205ENST00000610462 NPM1P06748 294 aaKnown RBP eCLIP38.93■■■■□ 3.82
CSPG5-205ENST00000610462 CARD11Q9BXL7 1154 aa38.92■■■■□ 3.82
CSPG5-205ENST00000610462 SCAPERQ9BY12 1400 aa38.91■■■■□ 3.82
CSPG5-205ENST00000610462 TRPM1Q7Z4N2 1603 aa38.9■■■■□ 3.82
CSPG5-205ENST00000610462 ARID4BQ4LE39 1312 aaPredicted RBP38.9■■■■□ 3.82
CSPG5-205ENST00000610462 PRAG1Q86YV5 1406 aa38.88■■■■□ 3.81
CSPG5-205ENST00000610462 E9PCH4 1651 aa38.87■■■■□ 3.81
CSPG5-205ENST00000610462 A2MP01023 1474 aa38.87■■■■□ 3.81
CSPG5-205ENST00000610462 PRKRIP1Q9H875 184 aaPredicted RBP38.83■■■■□ 3.81
CSPG5-205ENST00000610462 EIF2AK4Q9P2K8 1649 aaKnown RBP38.82■■■■□ 3.81
CSPG5-205ENST00000610462 ROCK2O75116 1388 aaKnown RBP38.81■■■■□ 3.8
CSPG5-205ENST00000610462 RGL3Q3MIN7 710 aa38.8■■■■□ 3.8
CSPG5-205ENST00000610462 CFAP74Q9C0B2 1584 aa38.79■■■■□ 3.8
CSPG5-205ENST00000610462 TET3O43151 1660 aa38.79■■■■□ 3.8
CSPG5-205ENST00000610462 VWDEQ8N2E2 1590 aa38.77■■■■□ 3.8
CSPG5-205ENST00000610462 LAMC1P11047 1609 aa38.76■■■■□ 3.79
CSPG5-205ENST00000610462 SPHKAPQ2M3C7 1700 aa38.75■■■■□ 3.79
CSPG5-205ENST00000610462 KIDINS220Q9ULH0 1771 aa38.75■■■■□ 3.79
CSPG5-205ENST00000610462 DHX29Q7Z478 1369 aaKnown RBP38.74■■■■□ 3.79
CSPG5-205ENST00000610462 TRPM2O94759 1503 aa38.74■■■■□ 3.79
CSPG5-205ENST00000610462 KANK1Q14678 1352 aa38.72■■■■□ 3.79
CSPG5-205ENST00000610462 ZNF518AQ6AHZ1 1483 aa38.71■■■■□ 3.79
CSPG5-205ENST00000610462 GPRASP1Q5JY77 1395 aa38.71■■■■□ 3.79
CSPG5-205ENST00000610462 CD109Q6YHK3 1445 aa38.71■■■■□ 3.79
CSPG5-205ENST00000610462 ST20-MTHFSA0A0A6YYL1 179 aa38.7■■■■□ 3.79
CSPG5-205ENST00000610462 MYT1LQ9UL68 1186 aa38.7■■■■□ 3.79
CSPG5-205ENST00000610462 PRDM15P57071 1507 aaPredicted RBP38.69■■■■□ 3.78
CSPG5-205ENST00000610462 PTPRTO14522 1441 aa38.69■■■■□ 3.78
CSPG5-205ENST00000610462 CEP152O94986 1710 aa38.69■■■■□ 3.78
CSPG5-205ENST00000610462 MROH1Q8NDA8 1641 aa38.67■■■■□ 3.78
CSPG5-205ENST00000610462 KIF3BO15066 747 aa38.65■■■■□ 3.78
CSPG5-205ENST00000610462 POLR3GLQ9BT43 218 aa38.65■■■■□ 3.78
CSPG5-205ENST00000610462 SUPT16HQ9Y5B9 1047 aaKnown RBP38.65■■■■□ 3.78
CSPG5-205ENST00000610462 CCDC184Q52MB2 194 aa38.62■■■■□ 3.77
CSPG5-205ENST00000610462 CLTCL1P53675 1640 aa38.61■■■■□ 3.77
CSPG5-205ENST00000610462 NBPF1Q3BBV0 1214 aa38.61■■■■□ 3.77
CSPG5-205ENST00000610462 POGZQ7Z3K3 1410 aa38.59■■■■□ 3.77
CSPG5-205ENST00000610462 RNF17Q9BXT8 1623 aaKnown RBP38.57■■■■□ 3.77
CSPG5-205ENST00000610462 HNRNPUQ00839 825 aaKnown RBP eCLIP38.55■■■■□ 3.76
CSPG5-205ENST00000610462 MRS2Q9HD23 443 aa38.54■■■■□ 3.76
CSPG5-205ENST00000610462 MADDQ8WXG6 1647 aa38.53■■■■□ 3.76
CSPG5-205ENST00000610462 MLH3Q9UHC1 1453 aa38.53■■■■□ 3.76
CSPG5-205ENST00000610462 HECW2Q9P2P5 1572 aa38.51■■■■□ 3.76
CSPG5-205ENST00000610462 NEURL4Q96JN8 1562 aa38.5■■■■□ 3.75
CSPG5-205ENST00000610462 EFCAB6Q5THR3 1501 aa38.49■■■■□ 3.75
CSPG5-205ENST00000610462 STAC3Q96MF2 364 aa38.48■■■■□ 3.75
CSPG5-205ENST00000610462 NEO1Q92859 1461 aa38.48■■■■□ 3.75
CSPG5-205ENST00000610462 LMTK2Q8IWU2 1503 aa38.48■■■■□ 3.75
CSPG5-205ENST00000610462 PPRC1Q5VV67 1664 aaKnown RBP38.44■■■■□ 3.74
CSPG5-205ENST00000610462 FRMPD1Q5SYB0 1578 aa38.43■■■■□ 3.74
CSPG5-205ENST00000610462 COL17A1Q9UMD9 1497 aaPredicted RBP38.42■■■■□ 3.74
CSPG5-205ENST00000610462 FAM9BQ8IZU0 186 aa38.4■■■■□ 3.74
CSPG5-205ENST00000610462 KIF1BO60333 1816 aa38.39■■■■□ 3.74
CSPG5-205ENST00000610462 ABCA6Q8N139 1617 aa38.39■■■■□ 3.74
CSPG5-205ENST00000610462 TESK2Q96S53 571 aa38.38■■■■□ 3.73
CSPG5-205ENST00000610462 IQGAP1P46940 1657 aa38.38■■■■□ 3.73
CSPG5-205ENST00000610462 MAP3K4Q9Y6R4 1608 aa38.36■■■■□ 3.73
CSPG5-205ENST00000610462 KIAA1210Q9ULL0 1709 aa38.33■■■■□ 3.73
CSPG5-205ENST00000610462 KTN1Q86UP2 1357 aaKnown RBP38.33■■■■□ 3.73
CSPG5-205ENST00000610462 UGGT1Q9NYU2 1555 aa38.31■■■■□ 3.72
CSPG5-205ENST00000610462 DISP3Q9P2K9 1392 aa38.3■■■■□ 3.72
CSPG5-205ENST00000610462 FKBP8Q14318 412 aa38.29■■■■□ 3.72
CSPG5-205ENST00000610462 CNGB1Q14028 1251 aaPredicted RBP38.28■■■■□ 3.72
CSPG5-205ENST00000610462 GLI2P10070 1586 aa38.28■■■■□ 3.72
CSPG5-205ENST00000610462 RICTORQ6R327 1708 aa38.27■■■■□ 3.72
CSPG5-205ENST00000610462 IFT172Q9UG01 1749 aa38.27■■■■□ 3.72
CSPG5-205ENST00000610462 NEFLP07196 543 aa38.27■■■■□ 3.72
CSPG5-205ENST00000610462 TMF1P82094 1093 aa38.26■■■■□ 3.71
CSPG5-205ENST00000610462 MYOM2P54296 1465 aa38.25■■■■□ 3.71
CSPG5-205ENST00000610462 RIMBP3CA6NJZ7 1639 aa38.25■■■■□ 3.71
CSPG5-205ENST00000610462 RIMBP3BA6NNM3 1639 aa38.25■■■■□ 3.71
CSPG5-205ENST00000610462 RIMBP3Q9UFD9 1639 aa38.25■■■■□ 3.71
CSPG5-205ENST00000610462 RALBP1Q15311 655 aa38.24■■■■□ 3.71
CSPG5-205ENST00000610462 ZBED9Q6R2W3 1325 aa38.24■■■■□ 3.71
CSPG5-205ENST00000610462 MROH2AA6NES4 1674 aa38.24■■■■□ 3.71
CSPG5-205ENST00000610462 CYB5RLQ6IPT4 315 aa38.23■■■■□ 3.71
CSPG5-205ENST00000610462 DIP2CQ9Y2E4 1556 aa38.23■■■■□ 3.71
CSPG5-205ENST00000610462 SCAF11Q99590 1463 aaKnown RBP38.23■■■■□ 3.71
CSPG5-205ENST00000610462 RAPGEF3O95398 923 aa38.23■■■■□ 3.71
CSPG5-205ENST00000610462 NPATQ14207 1427 aa38.19■■■■□ 3.7
CSPG5-205ENST00000610462 ABCC3O15438 1527 aa38.19■■■■□ 3.7
CSPG5-205ENST00000610462 GGT6Q6P531 493 aa38.18■■■■□ 3.7
CSPG5-205ENST00000610462 MYBBP1AQ9BQG0 1328 aaKnown RBP38.18■■■■□ 3.7
CSPG5-205ENST00000610462 ADGRB3O60242 1522 aa38.16■■■■□ 3.7
CSPG5-205ENST00000610462 PER1O15534 1290 aaPredicted RBP38.15■■■■□ 3.7
CSPG5-205ENST00000610462 BRD4O60885 1362 aaPredicted RBP38.15■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms