RNA–Protein interactions for RNA: ENST00000609386.1

SLF2-205, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS ALT2 BASIC

Gene SLF2, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-205ENST00000609386 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
SLF2-205ENST00000609386 DAPK1P53355 1430 aa28.6■■■□□ 2.17
SLF2-205ENST00000609386 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
SLF2-205ENST00000609386 RNF17Q9BXT8 1623 aaKnown RBP28.59■■■□□ 2.17
SLF2-205ENST00000609386 ILDR1Q86SU0 546 aaPredicted RBP28.59■■■□□ 2.17
SLF2-205ENST00000609386 FAM135AQ9P2D6 1515 aa28.59■■■□□ 2.17
SLF2-205ENST00000609386 WASHC2CQ9Y4E1 1318 aa28.58■■■□□ 2.17
SLF2-205ENST00000609386 DUOX2Q9NRD8 1548 aa28.58■■■□□ 2.17
SLF2-205ENST00000609386 ZNF142P52746 1687 aaPredicted RBP28.56■■■□□ 2.16
SLF2-205ENST00000609386 KIF15Q9NS87 1388 aa28.54■■■□□ 2.16
SLF2-205ENST00000609386 RRP7BPQ9NSQ0 103 aa28.53■■■□□ 2.16
SLF2-205ENST00000609386 CAMSAP1Q5T5Y3 1602 aa28.53■■■□□ 2.16
SLF2-205ENST00000609386 CEP170BQ9Y4F5 1589 aaPredicted RBP28.53■■■□□ 2.16
SLF2-205ENST00000609386 ZC3H13Q5T200 1668 aaKnown RBP28.52■■■□□ 2.16
SLF2-205ENST00000609386 FAM50AQ14320 339 aaKnown RBP28.51■■■□□ 2.15
SLF2-205ENST00000609386 CEP152O94986 1710 aa28.51■■■□□ 2.15
SLF2-205ENST00000609386 CHIC2Q9UKJ5 165 aa28.5■■■□□ 2.15
SLF2-205ENST00000609386 PZPP20742 1482 aa28.5■■■□□ 2.15
SLF2-205ENST00000609386 MROH1Q8NDA8 1641 aa28.49■■■□□ 2.15
SLF2-205ENST00000609386 DMRT2Q9Y5R5 561 aa28.48■■■□□ 2.15
SLF2-205ENST00000609386 ABCC3O15438 1527 aa28.48■■■□□ 2.15
SLF2-205ENST00000609386 NCOA1Q15788 1441 aa28.47■■■□□ 2.15
SLF2-205ENST00000609386 FBXO31Q5XUX0 539 aaPredicted RBP28.47■■■□□ 2.15
SLF2-205ENST00000609386 TNRQ92752 1358 aa28.46■■■□□ 2.15
SLF2-205ENST00000609386 ERBINQ96RT1 1412 aa28.45■■■□□ 2.15
SLF2-205ENST00000609386 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
SLF2-205ENST00000609386 ANKRD30AQ9BXX3 1397 aa28.45■■■□□ 2.14
SLF2-205ENST00000609386 A2ML1A8K2U0 1454 aa28.42■■■□□ 2.14
SLF2-205ENST00000609386 PRDM15P57071 1507 aaPredicted RBP28.4■■■□□ 2.14
SLF2-205ENST00000609386 PTPRTO14522 1441 aa28.4■■■□□ 2.14
SLF2-205ENST00000609386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.142e-13■□□□□ 8.4
SLF2-205ENST00000609386 CFAP65Q6ZU64 1925 aaKnown RBP28.39■■■□□ 2.13
SLF2-205ENST00000609386 DEPDC5O75140 1603 aa28.38■■■□□ 2.13
SLF2-205ENST00000609386 NCKAP5LQ9HCH0 1330 aa28.38■■■□□ 2.13
SLF2-205ENST00000609386 FBXO41Q8TF61 875 aa28.37■■■□□ 2.13
SLF2-205ENST00000609386 ADGRL2O95490 1459 aa28.36■■■□□ 2.13
SLF2-205ENST00000609386 PLA2R1Q13018 1463 aa28.36■■■□□ 2.13
SLF2-205ENST00000609386 SPATA31D1Q6ZQQ2 1576 aa28.33■■■□□ 2.13
SLF2-205ENST00000609386 CERKQ8TCT0 537 aa28.33■■■□□ 2.13
SLF2-205ENST00000609386 KANK1Q14678 1352 aa28.32■■■□□ 2.12
SLF2-205ENST00000609386 ERVK-7P63135 1459 aa28.32■■■□□ 2.12
SLF2-205ENST00000609386 POLR1AO95602 1720 aaPredicted RBP28.32■■■□□ 2.12
SLF2-205ENST00000609386 NLRP1Q9C000 1473 aa28.31■■■□□ 2.12
SLF2-205ENST00000609386 PKD2Q13563 968 aa28.29■■■□□ 2.12
SLF2-205ENST00000609386 UGGT1Q9NYU2 1555 aa28.28■■■□□ 2.12
SLF2-205ENST00000609386 ITGAEP38570 1179 aa28.24■■■□□ 2.11
SLF2-205ENST00000609386 ANKRD50Q9ULJ7 1429 aa28.24■■■□□ 2.11
SLF2-205ENST00000609386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.23■■■□□ 2.11
SLF2-205ENST00000609386 ARHGAP31Q2M1Z3 1444 aa28.22■■■□□ 2.11
SLF2-205ENST00000609386 VWDEQ8N2E2 1590 aa28.22■■■□□ 2.11
SLF2-205ENST00000609386 THEMISQ8N1K5 641 aaPredicted RBP28.21■■■□□ 2.11
SLF2-205ENST00000609386 LTBP4Q8N2S1 1624 aa28.2■■■□□ 2.1
SLF2-205ENST00000609386 NEURL4Q96JN8 1562 aa28.2■■■□□ 2.1
SLF2-205ENST00000609386 LMTK2Q8IWU2 1503 aa28.19■■■□□ 2.1
SLF2-205ENST00000609386 UBR1Q8IWV7 1749 aa28.19■■■□□ 2.1
SLF2-205ENST00000609386 ANKLE2Q86XL3 938 aa28.16■■■□□ 2.1
SLF2-205ENST00000609386 EFCAB6Q5THR3 1501 aa28.16■■■□□ 2.1
SLF2-205ENST00000609386 ZNF335Q9H4Z2 1342 aaPredicted RBP28.16■■■□□ 2.1
SLF2-205ENST00000609386 ROCK1Q13464 1354 aa28.14■■■□□ 2.1
SLF2-205ENST00000609386 UNC13BO14795 1591 aa28.13■■■□□ 2.09
SLF2-205ENST00000609386 PIK3C2BO00750 1634 aa28.13■■■□□ 2.09
SLF2-205ENST00000609386 TET3O43151 1660 aa28.1■■■□□ 2.09
SLF2-205ENST00000609386 IQGAP1P46940 1657 aa28.1■■■□□ 2.09
SLF2-205ENST00000609386 SYNMO15061 1565 aa28.08■■■□□ 2.09
SLF2-205ENST00000609386 GCC2Q8IWJ2 1684 aa28.08■■■□□ 2.09
SLF2-205ENST00000609386 NPHP4O75161 1426 aaPredicted RBP28.08■■■□□ 2.09
SLF2-205ENST00000609386 RRBP1Q9P2E9 1410 aaKnown RBP28.06■■■□□ 2.08
SLF2-205ENST00000609386 MED14O60244 1454 aa28.05■■■□□ 2.08
SLF2-205ENST00000609386 STAG3Q9UJ98 1225 aa28.05■■■□□ 2.08
SLF2-205ENST00000609386 IQSEC2Q5JU85 1478 aa28.02■■■□□ 2.08
SLF2-205ENST00000609386 IQGAP3Q86VI3 1631 aa28.02■■■□□ 2.08
SLF2-205ENST00000609386 RPRD2Q5VT52 1461 aaKnown RBP28.02■■■□□ 2.08
SLF2-205ENST00000609386 NOS1P29475 1434 aa28.01■■■□□ 2.08
SLF2-205ENST00000609386 KDM5AP29375 1690 aaKnown RBP28■■■□□ 2.07
SLF2-205ENST00000609386 SLIT1O75093 1534 aa28■■■□□ 2.07
SLF2-205ENST00000609386 SCAF11Q99590 1463 aaKnown RBP28■■■□□ 2.07
SLF2-205ENST00000609386 E9PCH4 1651 aa28■■■□□ 2.07
SLF2-205ENST00000609386 IDI1Q13907 227 aa27.99■■■□□ 2.07
SLF2-205ENST00000609386 ARHGAP23Q9P227 1491 aa27.98■■■□□ 2.07
SLF2-205ENST00000609386 TXNDC2Q86VQ3 553 aa27.97■■■□□ 2.07
SLF2-205ENST00000609386 ADGRB3O60242 1522 aa27.97■■■□□ 2.07
SLF2-205ENST00000609386 NUP155O75694 1391 aa27.96■■■□□ 2.07
SLF2-205ENST00000609386 CPS1P31327 1500 aa27.95■■■□□ 2.06
SLF2-205ENST00000609386 LTKP29376 864 aa27.94■■■□□ 2.06
SLF2-205ENST00000609386 EID1Q9Y6B2 187 aa27.94■■■□□ 2.06
SLF2-205ENST00000609386 MYO5BQ9ULV0 1848 aa27.94■■■□□ 2.06
SLF2-205ENST00000609386 TMEM2Q9UHN6 1383 aa27.93■■■□□ 2.06
SLF2-205ENST00000609386 SLC52A1Q9NWF4 448 aa27.91■■■□□ 2.06
SLF2-205ENST00000609386 STRCP1A6NGW2 1772 aa27.89■■■□□ 2.06
SLF2-205ENST00000609386 UBAP1LF5GYI3 381 aa27.88■■■□□ 2.05
SLF2-205ENST00000609386 NAIPQ13075 1403 aa27.85■■■□□ 2.05
SLF2-205ENST00000609386 TMEM131LA2VDJ0 1609 aa27.85■■■□□ 2.05
SLF2-205ENST00000609386 CHGAP10645 457 aaKnown RBP27.84■■■□□ 2.05
SLF2-205ENST00000609386 SPHKAPQ2M3C7 1700 aa27.81■■■□□ 2.04
SLF2-205ENST00000609386 SENP3Q9H4L4 574 aaPredicted RBP27.79■■■□□ 2.04
SLF2-205ENST00000609386 BCANQ96GW7 911 aa27.78■■■□□ 2.04
SLF2-205ENST00000609386 HFM1A2PYH4 1435 aa27.76■■■□□ 2.04
SLF2-205ENST00000609386 RIMS2Q9UQ26 1411 aa27.76■■■□□ 2.04
SLF2-205ENST00000609386 SCAF1Q9H7N4 1312 aaKnown RBP27.76■■■□□ 2.03
SLF2-205ENST00000609386 LRRC7Q96NW7 1537 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms