RNA–Protein interactions for RNA: ENST00000609262.5

HNF4A-207, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-207ENST00000609262 KDM5DQ9BY66 1539 aa27.73■■■□□ 2.03
HNF4A-207ENST00000609262 APLP2Q06481 763 aa27.73■■■□□ 2.03
HNF4A-207ENST00000609262 CAMSAP1Q5T5Y3 1602 aa27.71■■■□□ 2.03
HNF4A-207ENST00000609262 CEP170BQ9Y4F5 1589 aaPredicted RBP27.7■■■□□ 2.03
HNF4A-207ENST00000609262 PZPP20742 1482 aa27.66■■■□□ 2.02
HNF4A-207ENST00000609262 PLA2R1Q13018 1463 aa27.65■■■□□ 2.02
HNF4A-207ENST00000609262 WASHC2CQ9Y4E1 1318 aa27.65■■■□□ 2.02
HNF4A-207ENST00000609262 RNF17Q9BXT8 1623 aaKnown RBP27.64■■■□□ 2.02
HNF4A-207ENST00000609262 A2ML1A8K2U0 1454 aa27.63■■■□□ 2.01
HNF4A-207ENST00000609262 EIF2AK4Q9P2K8 1649 aaKnown RBP27.63■■■□□ 2.01
HNF4A-207ENST00000609262 PTPN23Q9H3S7 1636 aa27.62■■■□□ 2.01
HNF4A-207ENST00000609262 SHANK2Q9UPX8 1470 aa27.61■■■□□ 2.01
HNF4A-207ENST00000609262 TNRQ92752 1358 aa27.6■■■□□ 2.01
HNF4A-207ENST00000609262 TCOF1Q13428 1488 aaKnown RBP27.59■■■□□ 2.01
HNF4A-207ENST00000609262 FGD6Q6ZV73 1430 aa27.58■■■□□ 2.01
HNF4A-207ENST00000609262 DUOX2Q9NRD8 1548 aa27.58■■■□□ 2.01
HNF4A-207ENST00000609262 PKD2Q13563 968 aa27.58■■■□□ 2.01
HNF4A-207ENST00000609262 CROCC2H7BZ55 1655 aa27.57■■■□□ 2
HNF4A-207ENST00000609262 FBXO31Q5XUX0 539 aaPredicted RBP27.57■■■□□ 2
HNF4A-207ENST00000609262 NCKAP5LQ9HCH0 1330 aa27.57■■■□□ 2
HNF4A-207ENST00000609262 ABCC5O15440 1437 aa27.57■■■□□ 2
HNF4A-207ENST00000609262 ABCC3O15438 1527 aa27.57■■■□□ 2
HNF4A-207ENST00000609262 ZC3H13Q5T200 1668 aaKnown RBP27.56■■■□□ 2
HNF4A-207ENST00000609262 DNMT1P26358 1616 aaKnown RBP27.56■■■□□ 2
HNF4A-207ENST00000609262 LTBP4Q8N2S1 1624 aa27.55■■■□□ 2
HNF4A-207ENST00000609262 MROH1Q8NDA8 1641 aa27.54■■■□□ 2
HNF4A-207ENST00000609262 KIF15Q9NS87 1388 aa27.54■■■□□ 2
HNF4A-207ENST00000609262 DAPK1P53355 1430 aa27.53■■■□□ 2
HNF4A-207ENST00000609262 NLRP1Q9C000 1473 aa27.51■■□□□ 1.99
HNF4A-207ENST00000609262 ERBINQ96RT1 1412 aa27.5■■□□□ 1.99
HNF4A-207ENST00000609262 IQSEC2Q5JU85 1478 aa27.47■■□□□ 1.99
HNF4A-207ENST00000609262 SPATA31D1Q6ZQQ2 1576 aa27.47■■□□□ 1.99
HNF4A-207ENST00000609262 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
HNF4A-207ENST00000609262 RRP7BPQ9NSQ0 103 aa27.45■■□□□ 1.98
HNF4A-207ENST00000609262 CEP152O94986 1710 aa27.44■■□□□ 1.98
HNF4A-207ENST00000609262 ERVK-7P63135 1459 aa27.44■■□□□ 1.98
HNF4A-207ENST00000609262 UGGT1Q9NYU2 1555 aa27.43■■□□□ 1.98
HNF4A-207ENST00000609262 ZNF335Q9H4Z2 1342 aaPredicted RBP27.42■■□□□ 1.98
HNF4A-207ENST00000609262 POLR1AO95602 1720 aaPredicted RBP27.42■■□□□ 1.98
HNF4A-207ENST00000609262 ANKRD30AQ9BXX3 1397 aa27.41■■□□□ 1.98
HNF4A-207ENST00000609262 NEURL4Q96JN8 1562 aa27.4■■□□□ 1.98
HNF4A-207ENST00000609262 THEMISQ8N1K5 641 aaPredicted RBP27.4■■□□□ 1.98
HNF4A-207ENST00000609262 DEPDC5O75140 1603 aa27.38■■□□□ 1.97
HNF4A-207ENST00000609262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.38■■□□□ 1.972e-7■□□□□ 10.3
HNF4A-207ENST00000609262 ARHGAP31Q2M1Z3 1444 aa27.36■■□□□ 1.97
HNF4A-207ENST00000609262 CHIC2Q9UKJ5 165 aa27.36■■□□□ 1.97
HNF4A-207ENST00000609262 ANKLE2Q86XL3 938 aa27.35■■□□□ 1.97
HNF4A-207ENST00000609262 ADGRL2O95490 1459 aa27.35■■□□□ 1.97
HNF4A-207ENST00000609262 KANK1Q14678 1352 aa27.34■■□□□ 1.97
HNF4A-207ENST00000609262 FAM50AQ14320 339 aaKnown RBP27.32■■□□□ 1.96
HNF4A-207ENST00000609262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.31■■□□□ 1.965e-12■□□□□ 8.5
HNF4A-207ENST00000609262 MED14O60244 1454 aa27.31■■□□□ 1.96
HNF4A-207ENST00000609262 NPHP4O75161 1426 aaPredicted RBP27.29■■□□□ 1.96
HNF4A-207ENST00000609262 LMTK2Q8IWU2 1503 aa27.29■■□□□ 1.96
HNF4A-207ENST00000609262 VWDEQ8N2E2 1590 aa27.28■■□□□ 1.96
HNF4A-207ENST00000609262 UBR1Q8IWV7 1749 aa27.25■■□□□ 1.95
HNF4A-207ENST00000609262 CPS1P31327 1500 aa27.25■■□□□ 1.95
HNF4A-207ENST00000609262 CFAP65Q6ZU64 1925 aaKnown RBP27.24■■□□□ 1.95
HNF4A-207ENST00000609262 IQGAP1P46940 1657 aa27.23■■□□□ 1.95
HNF4A-207ENST00000609262 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
HNF4A-207ENST00000609262 UBAP1LF5GYI3 381 aa27.2■■□□□ 1.94
HNF4A-207ENST00000609262 EFCAB6Q5THR3 1501 aa27.2■■□□□ 1.94
HNF4A-207ENST00000609262 ARHGAP23Q9P227 1491 aa27.19■■□□□ 1.94
HNF4A-207ENST00000609262 SLIT1O75093 1534 aa27.18■■□□□ 1.94
HNF4A-207ENST00000609262 SCAF11Q99590 1463 aaKnown RBP27.18■■□□□ 1.94
HNF4A-207ENST00000609262 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
HNF4A-207ENST00000609262 SYNMO15061 1565 aa27.14■■□□□ 1.93
HNF4A-207ENST00000609262 NOS1P29475 1434 aa27.13■■□□□ 1.93
HNF4A-207ENST00000609262 KDM5AP29375 1690 aaKnown RBP27.11■■□□□ 1.93
HNF4A-207ENST00000609262 ROCK1Q13464 1354 aa27.11■■□□□ 1.93
HNF4A-207ENST00000609262 LTKP29376 864 aa27.1■■□□□ 1.93
HNF4A-207ENST00000609262 TXNDC2Q86VQ3 553 aa27.1■■□□□ 1.93
HNF4A-207ENST00000609262 RPRD2Q5VT52 1461 aaKnown RBP27.1■■□□□ 1.93
HNF4A-207ENST00000609262 TMEM2Q9UHN6 1383 aa27.09■■□□□ 1.93
HNF4A-207ENST00000609262 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
HNF4A-207ENST00000609262 UNC13BO14795 1591 aa27.09■■□□□ 1.93
HNF4A-207ENST00000609262 IDI1Q13907 227 aa27.08■■□□□ 1.93
HNF4A-207ENST00000609262 EID1Q9Y6B2 187 aa27.08■■□□□ 1.93
HNF4A-207ENST00000609262 TET3O43151 1660 aa27.07■■□□□ 1.92
HNF4A-207ENST00000609262 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
HNF4A-207ENST00000609262 TOM1O60784 492 aa27.04■■□□□ 1.92
HNF4A-207ENST00000609262 STRCP1A6NGW2 1772 aa27.04■■□□□ 1.92
HNF4A-207ENST00000609262 SLC52A1Q9NWF4 448 aa27.03■■□□□ 1.92
HNF4A-207ENST00000609262 LRRC7Q96NW7 1537 aa27.02■■□□□ 1.92
HNF4A-207ENST00000609262 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
HNF4A-207ENST00000609262 GCC2Q8IWJ2 1684 aa27.01■■□□□ 1.92
HNF4A-207ENST00000609262 DISP3Q9P2K9 1392 aa27.01■■□□□ 1.91
HNF4A-207ENST00000609262 SCAF1Q9H7N4 1312 aaKnown RBP26.97■■□□□ 1.91
HNF4A-207ENST00000609262 ITGAEP38570 1179 aa26.97■■□□□ 1.91
HNF4A-207ENST00000609262 IQGAP3Q86VI3 1631 aa26.97■■□□□ 1.91
HNF4A-207ENST00000609262 PIP4K2BP78356 416 aa26.96■■□□□ 1.91
HNF4A-207ENST00000609262 ALKQ9UM73 1620 aa26.95■■□□□ 1.91
HNF4A-207ENST00000609262 E9PCH4 1651 aa26.92■■□□□ 1.9
HNF4A-207ENST00000609262 RRBP1Q9P2E9 1410 aaKnown RBP26.9■■□□□ 1.9
HNF4A-207ENST00000609262 NUP155O75694 1391 aa26.9■■□□□ 1.9
HNF4A-207ENST00000609262 HSPA1LP34931 641 aa26.89■■□□□ 1.9
HNF4A-207ENST00000609262 TMEM131LA2VDJ0 1609 aa26.89■■□□□ 1.9
HNF4A-207ENST00000609262 ZFYVE9O95405 1425 aa26.89■■□□□ 1.89
HNF4A-207ENST00000609262 RIMS2Q9UQ26 1411 aa26.85■■□□□ 1.89
HNF4A-207ENST00000609262 SLC26A8Q96RN1 970 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms