RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
LINC01396-201ENST00000609099 MED14O60244 1454 aa13.97□□□□□ -0.17
LINC01396-201ENST00000609099 SYCP2Q9BX26 1530 aa13.96□□□□□ -0.17
LINC01396-201ENST00000609099 ZC3H13Q5T200 1668 aaKnown RBP13.96□□□□□ -0.17
LINC01396-201ENST00000609099 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
LINC01396-201ENST00000609099 SYNMO15061 1565 aa13.95□□□□□ -0.18
LINC01396-201ENST00000609099 ATP7AQ04656 1500 aa13.95□□□□□ -0.18
LINC01396-201ENST00000609099 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
LINC01396-201ENST00000609099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC01396-201ENST00000609099 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
LINC01396-201ENST00000609099 FBXO31Q5XUX0 539 aaPredicted RBP13.92□□□□□ -0.18
LINC01396-201ENST00000609099 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
LINC01396-201ENST00000609099 A2MP01023 1474 aa13.92□□□□□ -0.18
LINC01396-201ENST00000609099 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
LINC01396-201ENST00000609099 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
LINC01396-201ENST00000609099 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC01396-201ENST00000609099 TNRQ92752 1358 aa13.87□□□□□ -0.19
LINC01396-201ENST00000609099 PZPP20742 1482 aa13.87□□□□□ -0.19
LINC01396-201ENST00000609099 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
LINC01396-201ENST00000609099 LRP6O75581 1613 aa13.84□□□□□ -0.19
LINC01396-201ENST00000609099 GGT6Q6P531 493 aa13.84□□□□□ -0.19
LINC01396-201ENST00000609099 ROBO1Q9Y6N7 1651 aa13.84□□□□□ -0.19
LINC01396-201ENST00000609099 GPATCH8Q9UKJ3 1502 aaKnown RBP13.84□□□□□ -0.19
LINC01396-201ENST00000609099 CLIP1P30622 1438 aa13.83□□□□□ -0.2
LINC01396-201ENST00000609099 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC01396-201ENST00000609099 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
LINC01396-201ENST00000609099 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.2
LINC01396-201ENST00000609099 FMN1Q68DA7 1419 aa13.82□□□□□ -0.2
LINC01396-201ENST00000609099 MAP3K1Q13233 1512 aa13.82□□□□□ -0.2
LINC01396-201ENST00000609099 FAM135BQ49AJ0 1406 aa13.81□□□□□ -0.2
LINC01396-201ENST00000609099 EP400Q96L91 3159 aa13.81□□□□□ -0.2
LINC01396-201ENST00000609099 ANKLE2Q86XL3 938 aa13.8□□□□□ -0.2
LINC01396-201ENST00000609099 ATP1B4Q9UN42 357 aaPredicted RBP13.8□□□□□ -0.2
LINC01396-201ENST00000609099 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
LINC01396-201ENST00000609099 KDM5DQ9BY66 1539 aa13.79□□□□□ -0.2
LINC01396-201ENST00000609099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC01396-201ENST00000609099 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
LINC01396-201ENST00000609099 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
LINC01396-201ENST00000609099 UBR1Q8IWV7 1749 aa13.77□□□□□ -0.21
LINC01396-201ENST00000609099 MBD5Q9P267 1494 aa13.77□□□□□ -0.21
LINC01396-201ENST00000609099 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.21
LINC01396-201ENST00000609099 CDK11AQ9UQ88 783 aaPredicted RBP13.77□□□□□ -0.21
LINC01396-201ENST00000609099 COL16A1Q07092 1604 aaPredicted RBP13.76□□□□□ -0.21
LINC01396-201ENST00000609099 FAM135AQ9P2D6 1515 aa13.74□□□□□ -0.21
LINC01396-201ENST00000609099 ZNF777Q9ULD5 760 aaPredicted RBP13.74□□□□□ -0.21
LINC01396-201ENST00000609099 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
LINC01396-201ENST00000609099 ZNF644Q9H582 1327 aaPredicted RBP13.73□□□□□ -0.21
LINC01396-201ENST00000609099 LTKP29376 864 aa13.72□□□□□ -0.21
LINC01396-201ENST00000609099 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
LINC01396-201ENST00000609099 PHLPP1O60346 1717 aa13.72□□□□□ -0.21
LINC01396-201ENST00000609099 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
LINC01396-201ENST00000609099 MROH1Q8NDA8 1641 aa13.71□□□□□ -0.22
LINC01396-201ENST00000609099 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.22
LINC01396-201ENST00000609099 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
LINC01396-201ENST00000609099 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
LINC01396-201ENST00000609099 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
LINC01396-201ENST00000609099 SETBP1Q9Y6X0 1596 aa13.7□□□□□ -0.22
LINC01396-201ENST00000609099 TMEM94Q12767 1356 aa13.7□□□□□ -0.22
LINC01396-201ENST00000609099 ERVK-7P63135 1459 aa13.69□□□□□ -0.22
LINC01396-201ENST00000609099 EEA1Q15075 1411 aa13.69□□□□□ -0.22
LINC01396-201ENST00000609099 ABCC3O15438 1527 aa13.69□□□□□ -0.22
LINC01396-201ENST00000609099 SLIT1O75093 1534 aa13.69□□□□□ -0.22
LINC01396-201ENST00000609099 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
LINC01396-201ENST00000609099 TIAM1Q13009 1591 aa13.68□□□□□ -0.22
LINC01396-201ENST00000609099 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
LINC01396-201ENST00000609099 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
LINC01396-201ENST00000609099 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
LINC01396-201ENST00000609099 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
LINC01396-201ENST00000609099 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
LINC01396-201ENST00000609099 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
LINC01396-201ENST00000609099 RGS12O14924 1447 aa13.64□□□□□ -0.23
LINC01396-201ENST00000609099 TET3O43151 1660 aa13.64□□□□□ -0.23
LINC01396-201ENST00000609099 DIP2AQ14689 1571 aa13.64□□□□□ -0.23
LINC01396-201ENST00000609099 JCADQ9P266 1359 aa13.64□□□□□ -0.23
LINC01396-201ENST00000609099 KIF3BO15066 747 aa13.64□□□□□ -0.23
LINC01396-201ENST00000609099 RXRBP28702 533 aa13.64□□□□□ -0.23
LINC01396-201ENST00000609099 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
LINC01396-201ENST00000609099 CDK12Q9NYV4 1490 aaPredicted RBP13.63□□□□□ -0.23
LINC01396-201ENST00000609099 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
LINC01396-201ENST00000609099 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
LINC01396-201ENST00000609099 CEP152O94986 1710 aa13.63□□□□□ -0.23
LINC01396-201ENST00000609099 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
LINC01396-201ENST00000609099 CAMSAP2Q08AD1 1489 aa13.61□□□□□ -0.23
LINC01396-201ENST00000609099 PRDM15P57071 1507 aaPredicted RBP13.61□□□□□ -0.23
LINC01396-201ENST00000609099 PIK3C2BO00750 1634 aa13.6□□□□□ -0.23
LINC01396-201ENST00000609099 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
LINC01396-201ENST00000609099 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
LINC01396-201ENST00000609099 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
LINC01396-201ENST00000609099 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
LINC01396-201ENST00000609099 WASHC2CQ9Y4E1 1318 aa13.59□□□□□ -0.23
LINC01396-201ENST00000609099 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
LINC01396-201ENST00000609099 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
LINC01396-201ENST00000609099 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
LINC01396-201ENST00000609099 FGD6Q6ZV73 1430 aa13.55□□□□□ -0.24
LINC01396-201ENST00000609099 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
LINC01396-201ENST00000609099 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
LINC01396-201ENST00000609099 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
LINC01396-201ENST00000609099 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
LINC01396-201ENST00000609099 KCNA6P17658 529 aa13.52□□□□□ -0.25
LINC01396-201ENST00000609099 SLAIN2Q9P270 581 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms