RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ZNF142P52746 1687 aaPredicted RBP21.17■□□□□ 0.98
POLR2J3-219ENST00000608621 ARHGEF5Q12774 1597 aa21.16■□□□□ 0.98
POLR2J3-219ENST00000608621 PLA2R1Q13018 1463 aa21.16■□□□□ 0.98
POLR2J3-219ENST00000608621 ZNF335Q9H4Z2 1342 aaPredicted RBP21.15■□□□□ 0.98
POLR2J3-219ENST00000608621 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
POLR2J3-219ENST00000608621 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
POLR2J3-219ENST00000608621 TNRQ92752 1358 aa21.13■□□□□ 0.97
POLR2J3-219ENST00000608621 MAP3K1Q13233 1512 aa21.12■□□□□ 0.97
POLR2J3-219ENST00000608621 KDM5DQ9BY66 1539 aa21.11■□□□□ 0.97
POLR2J3-219ENST00000608621 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-219ENST00000608621 PZPP20742 1482 aa21.1■□□□□ 0.97
POLR2J3-219ENST00000608621 IQSEC2Q5JU85 1478 aa21.1■□□□□ 0.97
POLR2J3-219ENST00000608621 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
POLR2J3-219ENST00000608621 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
POLR2J3-219ENST00000608621 MIA2Q96PC5 1412 aa21.08■□□□□ 0.97
POLR2J3-219ENST00000608621 THEMISQ8N1K5 641 aaPredicted RBP21.06■□□□□ 0.96
POLR2J3-219ENST00000608621 MAST1Q9Y2H9 1570 aa21.06■□□□□ 0.96
POLR2J3-219ENST00000608621 APLP2Q06481 763 aa21.05■□□□□ 0.96
POLR2J3-219ENST00000608621 UBAP1LF5GYI3 381 aa21.04■□□□□ 0.96
POLR2J3-219ENST00000608621 ANKLE2Q86XL3 938 aa21.04■□□□□ 0.96
POLR2J3-219ENST00000608621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.03■□□□□ 0.96
POLR2J3-219ENST00000608621 DISP3Q9P2K9 1392 aa21.02■□□□□ 0.96
POLR2J3-219ENST00000608621 NLRP1Q9C000 1473 aa21■□□□□ 0.95
POLR2J3-219ENST00000608621 RNF17Q9BXT8 1623 aaKnown RBP21■□□□□ 0.95
POLR2J3-219ENST00000608621 ABCC3O15438 1527 aa20.99■□□□□ 0.95
POLR2J3-219ENST00000608621 UGGT1Q9NYU2 1555 aa20.98■□□□□ 0.95
POLR2J3-219ENST00000608621 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
POLR2J3-219ENST00000608621 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
POLR2J3-219ENST00000608621 NEURL4Q96JN8 1562 aa20.97■□□□□ 0.95
POLR2J3-219ENST00000608621 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
POLR2J3-219ENST00000608621 DUOX2Q9NRD8 1548 aa20.96■□□□□ 0.95
POLR2J3-219ENST00000608621 ABCC5O15440 1437 aa20.95■□□□□ 0.95
POLR2J3-219ENST00000608621 ILDR2Q71H61 639 aa20.95■□□□□ 0.94
POLR2J3-219ENST00000608621 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
POLR2J3-219ENST00000608621 ZC3H13Q5T200 1668 aaKnown RBP20.94■□□□□ 0.94
POLR2J3-219ENST00000608621 KIF15Q9NS87 1388 aa20.94■□□□□ 0.94
POLR2J3-219ENST00000608621 MROH1Q8NDA8 1641 aa20.93■□□□□ 0.94
POLR2J3-219ENST00000608621 SHANK2Q9UPX8 1470 aa20.93■□□□□ 0.94
POLR2J3-219ENST00000608621 SPATA31D1Q6ZQQ2 1576 aa20.93■□□□□ 0.94
POLR2J3-219ENST00000608621 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
POLR2J3-219ENST00000608621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.94
POLR2J3-219ENST00000608621 NPHP4O75161 1426 aaPredicted RBP20.92■□□□□ 0.94
POLR2J3-219ENST00000608621 ERVK-7P63135 1459 aa20.92■□□□□ 0.94
POLR2J3-219ENST00000608621 MED14O60244 1454 aa20.91■□□□□ 0.94
POLR2J3-219ENST00000608621 CEP152O94986 1710 aa20.91■□□□□ 0.94
POLR2J3-219ENST00000608621 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
POLR2J3-219ENST00000608621 CPS1P31327 1500 aa20.89■□□□□ 0.94
POLR2J3-219ENST00000608621 DAPK1P53355 1430 aa20.89■□□□□ 0.94
POLR2J3-219ENST00000608621 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
POLR2J3-219ENST00000608621 TOM1O60784 492 aa20.88■□□□□ 0.93
POLR2J3-219ENST00000608621 DEPDC5O75140 1603 aa20.88■□□□□ 0.93
POLR2J3-219ENST00000608621 ERBINQ96RT1 1412 aa20.87■□□□□ 0.93
POLR2J3-219ENST00000608621 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
POLR2J3-219ENST00000608621 PIP4K2BP78356 416 aa20.87■□□□□ 0.93
POLR2J3-219ENST00000608621 CROCC2H7BZ55 1655 aa20.86■□□□□ 0.93
POLR2J3-219ENST00000608621 VWDEQ8N2E2 1590 aa20.86■□□□□ 0.93
POLR2J3-219ENST00000608621 ARHGAP31Q2M1Z3 1444 aa20.85■□□□□ 0.93
POLR2J3-219ENST00000608621 ANKRD30AQ9BXX3 1397 aa20.84■□□□□ 0.93
POLR2J3-219ENST00000608621 KANK1Q14678 1352 aa20.83■□□□□ 0.92
POLR2J3-219ENST00000608621 PRDM15P57071 1507 aaPredicted RBP20.83■□□□□ 0.92
POLR2J3-219ENST00000608621 IQGAP1P46940 1657 aa20.83■□□□□ 0.92
POLR2J3-219ENST00000608621 LTKP29376 864 aa20.82■□□□□ 0.92
POLR2J3-219ENST00000608621 HSPA1LP34931 641 aa20.82■□□□□ 0.92
POLR2J3-219ENST00000608621 TXNDC2Q86VQ3 553 aa20.82■□□□□ 0.92
POLR2J3-219ENST00000608621 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
POLR2J3-219ENST00000608621 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
POLR2J3-219ENST00000608621 SOCS7O14512 581 aa20.79■□□□□ 0.92
POLR2J3-219ENST00000608621 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
POLR2J3-219ENST00000608621 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
POLR2J3-219ENST00000608621 SCAF11Q99590 1463 aaKnown RBP20.77■□□□□ 0.92
POLR2J3-219ENST00000608621 ARHGAP23Q9P227 1491 aa20.76■□□□□ 0.91
POLR2J3-219ENST00000608621 IDI1Q13907 227 aa20.76■□□□□ 0.91
POLR2J3-219ENST00000608621 STRCP1A6NGW2 1772 aa20.76■□□□□ 0.91
POLR2J3-219ENST00000608621 SLIT1O75093 1534 aa20.75■□□□□ 0.91
POLR2J3-219ENST00000608621 LRRC7Q96NW7 1537 aa20.74■□□□□ 0.91
POLR2J3-219ENST00000608621 PIK3C2BO00750 1634 aa20.73■□□□□ 0.91
POLR2J3-219ENST00000608621 LMTK2Q8IWU2 1503 aa20.73■□□□□ 0.91
POLR2J3-219ENST00000608621 TMEM2Q9UHN6 1383 aa20.72■□□□□ 0.91
POLR2J3-219ENST00000608621 ADGRL2O95490 1459 aa20.71■□□□□ 0.91
POLR2J3-219ENST00000608621 ALKQ9UM73 1620 aa20.71■□□□□ 0.91
POLR2J3-219ENST00000608621 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
POLR2J3-219ENST00000608621 SLC52A1Q9NWF4 448 aa20.67■□□□□ 0.9
POLR2J3-219ENST00000608621 NOS1P29475 1434 aa20.67■□□□□ 0.9
POLR2J3-219ENST00000608621 ANKRD50Q9ULJ7 1429 aa20.67■□□□□ 0.9
POLR2J3-219ENST00000608621 EFCAB6Q5THR3 1501 aa20.66■□□□□ 0.9
POLR2J3-219ENST00000608621 SYNMO15061 1565 aa20.66■□□□□ 0.9
POLR2J3-219ENST00000608621 SLC26A8Q96RN1 970 aa20.64■□□□□ 0.89
POLR2J3-219ENST00000608621 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-219ENST00000608621 KCNA6P17658 529 aa20.61■□□□□ 0.89
POLR2J3-219ENST00000608621 BCANQ96GW7 911 aa20.61■□□□□ 0.89
POLR2J3-219ENST00000608621 MED1Q15648 1581 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-219ENST00000608621 XIRP1Q702N8 1843 aaKnown RBP20.59■□□□□ 0.89
POLR2J3-219ENST00000608621 TET3O43151 1660 aa20.58■□□□□ 0.89
POLR2J3-219ENST00000608621 RPRD2Q5VT52 1461 aaKnown RBP20.58■□□□□ 0.89
POLR2J3-219ENST00000608621 PROSER2Q86WR7 435 aaPredicted RBP20.58■□□□□ 0.89
POLR2J3-219ENST00000608621 ADGRB3O60242 1522 aa20.58■□□□□ 0.88
POLR2J3-219ENST00000608621 TMEM94Q12767 1356 aa20.57■□□□□ 0.88
POLR2J3-219ENST00000608621 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-219ENST00000608621 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-219ENST00000608621 ITGAEP38570 1179 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms