RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.69	■■■□□ 2.98
NECAB3-222	ENST00000607805	KDM5D	Q9BY66	1539 aa		33.69	■■■□□ 2.98
NECAB3-222	ENST00000607805	PZP	P20742	1482 aa		33.66	■■■□□ 2.98
NECAB3-222	ENST00000607805	KIF3B	O15066	747 aa		33.65	■■■□□ 2.98
NECAB3-222	ENST00000607805	LRRC9	Q6ZRR7	1453 aa		33.62	■■■□□ 2.97
NECAB3-222	ENST00000607805	DISP3	Q9P2K9	1392 aa		33.61	■■■□□ 2.97
NECAB3-222	ENST00000607805	NEURL4	Q96JN8	1562 aa		33.61	■■■□□ 2.97
NECAB3-222	ENST00000607805	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.6	■■■□□ 2.97
NECAB3-222	ENST00000607805	VPS8	Q8N3P4	1428 aa		33.6	■■■□□ 2.97
NECAB3-222	ENST00000607805	TNR	Q92752	1358 aa		33.6	■■■□□ 2.97
NECAB3-222	ENST00000607805	MAST1	Q9Y2H9	1570 aa		33.59	■■■□□ 2.97
NECAB3-222	ENST00000607805	RNF17	Q9BXT8	1623 aa	Known RBP	33.58	■■■□□ 2.97
NECAB3-222	ENST00000607805	SPATA31D1	Q6ZQQ2	1576 aa		33.57	■■■□□ 2.96
NECAB3-222	ENST00000607805	ILDR2	Q71H61	639 aa		33.56	■■■□□ 2.96
NECAB3-222	ENST00000607805	WASHC2C	Q9Y4E1	1318 aa		33.53	■■■□□ 2.96
NECAB3-222	ENST00000607805	MAP3K1	Q13233	1512 aa		33.53	■■■□□ 2.96
NECAB3-222	ENST00000607805	TSPY4	P0CV99	314 aa		33.51	■■■□□ 2.95
NECAB3-222	ENST00000607805	TSPY10	P0CW01	314 aa		33.51	■■■□□ 2.95
NECAB3-222	ENST00000607805	MIA2	Q96PC5	1412 aa		33.51	■■■□□ 2.95
NECAB3-222	ENST00000607805	ZC3H13	Q5T200	1668 aa	Known RBP	33.51	■■■□□ 2.95
NECAB3-222	ENST00000607805	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.5	■■■□□ 2.95
NECAB3-222	ENST00000607805	NLRP1	Q9C000	1473 aa		33.49	■■■□□ 2.95
NECAB3-222	ENST00000607805	CFAP65	Q6ZU64	1925 aa	Known RBP	33.47	■■■□□ 2.95
NECAB3-222	ENST00000607805	MROH1	Q8NDA8	1641 aa		33.47	■■■□□ 2.95
NECAB3-222	ENST00000607805	LOC105371045	A0A1W2PR82	267 aa		33.47	■■■□□ 2.95
NECAB3-222	ENST00000607805	UBAP1L	F5GYI3	381 aa		33.47	■■■□□ 2.95
NECAB3-222	ENST00000607805	DEPDC5	O75140	1603 aa		33.46	■■■□□ 2.95
NECAB3-222	ENST00000607805	ABCC3	O15438	1527 aa		33.46	■■■□□ 2.95
NECAB3-222	ENST00000607805	UGGT1	Q9NYU2	1555 aa		33.44	■■■□□ 2.94
NECAB3-222	ENST00000607805	KANK4	Q5T7N3	995 aa	Predicted RBP	33.44	■■■□□ 2.94
NECAB3-222	ENST00000607805	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.42	■■■□□ 2.94	5e-7	■■■■■ 29.7
NECAB3-222	ENST00000607805	MYOM3	Q5VTT5	1437 aa		33.42	■■■□□ 2.94
NECAB3-222	ENST00000607805	MED14	O60244	1454 aa		33.42	■■■□□ 2.94
NECAB3-222	ENST00000607805	CPS1	P31327	1500 aa		33.42	■■■□□ 2.94
NECAB3-222	ENST00000607805	CEP152	O94986	1710 aa		33.42	■■■□□ 2.94
NECAB3-222	ENST00000607805	SHANK2	Q9UPX8	1470 aa		33.41	■■■□□ 2.94
NECAB3-222	ENST00000607805	VWDE	Q8N2E2	1590 aa		33.41	■■■□□ 2.94
NECAB3-222	ENST00000607805	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.39	■■■□□ 2.94
NECAB3-222	ENST00000607805	ANKLE2	Q86XL3	938 aa		33.37	■■■□□ 2.93
NECAB3-222	ENST00000607805	SOCS7	O14512	581 aa		33.36	■■■□□ 2.93
NECAB3-222	ENST00000607805	IQGAP1	P46940	1657 aa		33.36	■■■□□ 2.93
NECAB3-222	ENST00000607805	CROCC2	H7BZ55	1655 aa		33.35	■■■□□ 2.93
NECAB3-222	ENST00000607805	DUOX2	Q9NRD8	1548 aa		33.33	■■■□□ 2.93
NECAB3-222	ENST00000607805	ERVK-7	P63135	1459 aa		33.33	■■■□□ 2.93
NECAB3-222	ENST00000607805	STRCP1	A6NGW2	1772 aa		33.33	■■■□□ 2.93
NECAB3-222	ENST00000607805	NPHP4	O75161	1426 aa	Predicted RBP	33.32	■■■□□ 2.92
NECAB3-222	ENST00000607805	UBR1	Q8IWV7	1749 aa		33.31	■■■□□ 2.92
NECAB3-222	ENST00000607805	ALK	Q9UM73	1620 aa		33.27	■■■□□ 2.92
NECAB3-222	ENST00000607805	PRDM15	P57071	1507 aa	Predicted RBP	33.26	■■■□□ 2.91
NECAB3-222	ENST00000607805	PTPN23	Q9H3S7	1636 aa		33.24	■■■□□ 2.91
NECAB3-222	ENST00000607805	ABCC5	O15440	1437 aa		33.22	■■■□□ 2.91
NECAB3-222	ENST00000607805	ARHGAP31	Q2M1Z3	1444 aa		33.2	■■■□□ 2.91
NECAB3-222	ENST00000607805	TOM1	O60784	492 aa		33.2	■■■□□ 2.91
NECAB3-222	ENST00000607805	KIF15	Q9NS87	1388 aa		33.19	■■■□□ 2.9
NECAB3-222	ENST00000607805	ERBIN	Q96RT1	1412 aa		33.19	■■■□□ 2.9
NECAB3-222	ENST00000607805	HSPA1L	P34931	641 aa		33.17	■■■□□ 2.9
NECAB3-222	ENST00000607805	SYNM	O15061	1565 aa		33.15	■■■□□ 2.9
NECAB3-222	ENST00000607805	ARHGAP23	Q9P227	1491 aa		33.15	■■■□□ 2.9
NECAB3-222	ENST00000607805	SLIT1	O75093	1534 aa		33.14	■■■□□ 2.9
NECAB3-222	ENST00000607805	LRRC7	Q96NW7	1537 aa		33.13	■■■□□ 2.89
NECAB3-222	ENST00000607805	PIP4K2B	P78356	416 aa		33.13	■■■□□ 2.89
NECAB3-222	ENST00000607805	DAPK1	P53355	1430 aa		33.12	■■■□□ 2.89
NECAB3-222	ENST00000607805	SCAF11	Q99590	1463 aa	Known RBP	33.11	■■■□□ 2.89
NECAB3-222	ENST00000607805	MED1	Q15648	1581 aa	Predicted RBP	33.1	■■■□□ 2.89
NECAB3-222	ENST00000607805	FGD6	Q6ZV73	1430 aa		33.1	■■■□□ 2.89
NECAB3-222	ENST00000607805	XIRP1	Q702N8	1843 aa	Known RBP	33.09	■■■□□ 2.89
NECAB3-222	ENST00000607805	SCAF1	Q9H7N4	1312 aa	Known RBP	33.09	■■■□□ 2.89
NECAB3-222	ENST00000607805	PIK3C2B	O00750	1634 aa		33.09	■■■□□ 2.89
NECAB3-222	ENST00000607805	RRP7BP	Q9NSQ0	103 aa		33.08	■■■□□ 2.89
NECAB3-222	ENST00000607805	KDM5A	P29375	1690 aa	Known RBP	33.07	■■■□□ 2.89
NECAB3-222	ENST00000607805	LTK	P29376	864 aa		33.05	■■■□□ 2.88
NECAB3-222	ENST00000607805	LMTK2	Q8IWU2	1503 aa		33.05	■■■□□ 2.88
NECAB3-222	ENST00000607805	APLP2	Q06481	763 aa		32.99	■■■□□ 2.87
NECAB3-222	ENST00000607805	TXNDC2	Q86VQ3	553 aa		32.98	■■■□□ 2.87
NECAB3-222	ENST00000607805	ANKRD30A	Q9BXX3	1397 aa		32.96	■■■□□ 2.87
NECAB3-222	ENST00000607805	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.96	■■■□□ 2.87	2e-7	■■□□□ 11.4
NECAB3-222	ENST00000607805	KANK1	Q14678	1352 aa		32.96	■■■□□ 2.87
NECAB3-222	ENST00000607805	TMEM2	Q9UHN6	1383 aa		32.95	■■■□□ 2.86
NECAB3-222	ENST00000607805	ADGRL2	O95490	1459 aa		32.93	■■■□□ 2.86
NECAB3-222	ENST00000607805	EFCAB6	Q5THR3	1501 aa		32.92	■■■□□ 2.86
NECAB3-222	ENST00000607805	CHIC2	Q9UKJ5	165 aa		32.91	■■■□□ 2.86
NECAB3-222	ENST00000607805	NOS1	P29475	1434 aa		32.9	■■■□□ 2.86
NECAB3-222	ENST00000607805	TET3	O43151	1660 aa		32.89	■■■□□ 2.86
NECAB3-222	ENST00000607805	IDI1	Q13907	227 aa		32.89	■■■□□ 2.86
NECAB3-222	ENST00000607805	EID1	Q9Y6B2	187 aa		32.89	■■■□□ 2.86
NECAB3-222	ENST00000607805	MYO5B	Q9ULV0	1848 aa		32.85	■■■□□ 2.85
NECAB3-222	ENST00000607805	ADGRB3	O60242	1522 aa		32.83	■■■□□ 2.85
NECAB3-222	ENST00000607805	STAG3	Q9UJ98	1225 aa		32.79	■■■□□ 2.84
NECAB3-222	ENST00000607805	RPRD2	Q5VT52	1461 aa	Known RBP	32.77	■■■□□ 2.84
NECAB3-222	ENST00000607805	NWD1	Q149M9	1564 aa		32.75	■■■□□ 2.83
NECAB3-222	ENST00000607805	ANKRD50	Q9ULJ7	1429 aa		32.75	■■■□□ 2.83
NECAB3-222	ENST00000607805	GCC2	Q8IWJ2	1684 aa		32.75	■■■□□ 2.83
NECAB3-222	ENST00000607805	SLC52A1	Q9NWF4	448 aa		32.74	■■■□□ 2.83
NECAB3-222	ENST00000607805	KCNA6	P17658	529 aa		32.73	■■■□□ 2.83
NECAB3-222	ENST00000607805	FAM135B	Q49AJ0	1406 aa		32.72	■■■□□ 2.83
NECAB3-222	ENST00000607805	CHD2	O14647	1828 aa	Known RBP	32.72	■■■□□ 2.83
NECAB3-222	ENST00000607805	TMEM94	Q12767	1356 aa		32.71	■■■□□ 2.83
NECAB3-222	ENST00000607805	SENP3	Q9H4L4	574 aa	Predicted RBP	32.7	■■■□□ 2.83
NECAB3-222	ENST00000607805	UNC13B	O14795	1591 aa		32.7	■■■□□ 2.82
NECAB3-222	ENST00000607805	TMEM131L	A2VDJ0	1609 aa		32.69	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms