RNA–Protein interactions for RNA: ENST00000606885.1

AP002856.2-202, humanhuman

TSL 1 (best) BASIC

Gene AP002856.2, Length 755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-202ENST00000606885 CDK11AQ9UQ88 783 aaPredicted RBP15.24■□□□□ 0.03
AP002856.2-202ENST00000606885 DEPDC5O75140 1603 aa15.24■□□□□ 0.03
AP002856.2-202ENST00000606885 KIDINS220Q9ULH0 1771 aa15.24■□□□□ 0.03
AP002856.2-202ENST00000606885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
AP002856.2-202ENST00000606885 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
AP002856.2-202ENST00000606885 STRCP1A6NGW2 1772 aa15.21■□□□□ 0.03
AP002856.2-202ENST00000606885 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
AP002856.2-202ENST00000606885 RXRBP28702 533 aa15.2■□□□□ 0.02
AP002856.2-202ENST00000606885 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
AP002856.2-202ENST00000606885 IQGAP1P46940 1657 aa15.19■□□□□ 0.02
AP002856.2-202ENST00000606885 CDK13Q14004 1512 aaKnown RBP15.19■□□□□ 0.02
AP002856.2-202ENST00000606885 GGT6Q6P531 493 aa15.18■□□□□ 0.02
AP002856.2-202ENST00000606885 TNRQ92752 1358 aa15.18■□□□□ 0.02
AP002856.2-202ENST00000606885 ABCC1P33527 1531 aa15.17■□□□□ 0.02
AP002856.2-202ENST00000606885 JCADQ9P266 1359 aa15.17■□□□□ 0.02
AP002856.2-202ENST00000606885 KIF14Q15058 1648 aa15.16■□□□□ 0.02
AP002856.2-202ENST00000606885 FAM135AQ9P2D6 1515 aa15.15■□□□□ 0.02
AP002856.2-202ENST00000606885 ITSN2Q9NZM3 1697 aa15.14■□□□□ 0.01
AP002856.2-202ENST00000606885 MEX3CQ5U5Q3 659 aaKnown RBP15.13■□□□□ 0.01
AP002856.2-202ENST00000606885 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
AP002856.2-202ENST00000606885 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
AP002856.2-202ENST00000606885 NLRP1Q9C000 1473 aa15.12■□□□□ 0.01
AP002856.2-202ENST00000606885 SPAG9O60271 1321 aaKnown RBP15.12■□□□□ 0.01
AP002856.2-202ENST00000606885 SPATA31A6Q5VVP1 1343 aa15.12■□□□□ 0.01
AP002856.2-202ENST00000606885 UGGT1Q9NYU2 1555 aa15.11■□□□□ 0.01
AP002856.2-202ENST00000606885 CLIP1P30622 1438 aa15.11■□□□□ 0.01
AP002856.2-202ENST00000606885 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
AP002856.2-202ENST00000606885 TROQ12816 1431 aaPredicted RBP15.1■□□□□ 0.01
AP002856.2-202ENST00000606885 PLXNC1O60486 1568 aa15.1■□□□□ 0.01
AP002856.2-202ENST00000606885 A2MP01023 1474 aa15.09■□□□□ 0.01
AP002856.2-202ENST00000606885 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
AP002856.2-202ENST00000606885 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
AP002856.2-202ENST00000606885 FBXO31Q5XUX0 539 aaPredicted RBP15.09■□□□□ 0.01
AP002856.2-202ENST00000606885 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
AP002856.2-202ENST00000606885 SAMD9LQ8IVG5 1584 aa15.09■□□□□ 0.01
AP002856.2-202ENST00000606885 LRRC9Q6ZRR7 1453 aa15.08■□□□□ 0.01
AP002856.2-202ENST00000606885 RNF39Q9H2S5 420 aa15.08■□□□□ 0
AP002856.2-202ENST00000606885 MIA2Q96PC5 1412 aa15.07■□□□□ 0
AP002856.2-202ENST00000606885 IFFO2Q5TF58 517 aa15.06■□□□□ 0
AP002856.2-202ENST00000606885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 0
AP002856.2-202ENST00000606885 PZPP20742 1482 aa15.06■□□□□ 0
AP002856.2-202ENST00000606885 SETBP1Q9Y6X0 1596 aa15.05■□□□□ -0
AP002856.2-202ENST00000606885 PHLPP1O60346 1717 aa15.05■□□□□ -0
AP002856.2-202ENST00000606885 PREX2Q70Z35 1606 aa15.04■□□□□ -0
AP002856.2-202ENST00000606885 FGD6Q6ZV73 1430 aa15.04■□□□□ -0
AP002856.2-202ENST00000606885 ATP1B4Q9UN42 357 aaPredicted RBP15.04■□□□□ -0
AP002856.2-202ENST00000606885 ATP7AQ04656 1500 aa15.03■□□□□ -0
AP002856.2-202ENST00000606885 ZC3H13Q5T200 1668 aaKnown RBP15.03■□□□□ -0
AP002856.2-202ENST00000606885 NUTM2BA6NNL0 878 aaPredicted RBP15.02■□□□□ -0
AP002856.2-202ENST00000606885 NUTM2EB1AL46 878 aaPredicted RBP15.02■□□□□ -0
AP002856.2-202ENST00000606885 NUTM2DQ5VT03 806 aaPredicted RBP15.02■□□□□ -0
AP002856.2-202ENST00000606885 NUTM2AQ8IVF1 878 aaPredicted RBP15.02■□□□□ -0
AP002856.2-202ENST00000606885 LRP6O75581 1613 aa15.02□□□□□ -0.01
AP002856.2-202ENST00000606885 TMEM94Q12767 1356 aa15□□□□□ -0.01
AP002856.2-202ENST00000606885 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
AP002856.2-202ENST00000606885 SLAIN2Q9P270 581 aa14.99□□□□□ -0.01
AP002856.2-202ENST00000606885 RBM6P78332 1123 aaKnown RBP14.98□□□□□ -0.01
AP002856.2-202ENST00000606885 CCDC125Q86Z20 511 aa14.98□□□□□ -0.01
AP002856.2-202ENST00000606885 SCAF11Q99590 1463 aaKnown RBP14.96□□□□□ -0.01
AP002856.2-202ENST00000606885 RGS12O14924 1447 aa14.96□□□□□ -0.01
AP002856.2-202ENST00000606885 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
AP002856.2-202ENST00000606885 INO80Q9ULG1 1556 aaPredicted RBP14.96□□□□□ -0.01
AP002856.2-202ENST00000606885 ADGBQ8N7X0 1667 aa14.96□□□□□ -0.01
AP002856.2-202ENST00000606885 COL16A1Q07092 1604 aaPredicted RBP14.95□□□□□ -0.02
AP002856.2-202ENST00000606885 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
AP002856.2-202ENST00000606885 HNRNPMP52272 730 aaKnown RBP eCLIP14.95□□□□□ -0.02
AP002856.2-202ENST00000606885 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
AP002856.2-202ENST00000606885 AFF2P51816 1311 aa14.94□□□□□ -0.02
AP002856.2-202ENST00000606885 KIAA1107Q9UPP5 1409 aa14.94□□□□□ -0.02
AP002856.2-202ENST00000606885 SYCP2Q9BX26 1530 aa14.94□□□□□ -0.02
AP002856.2-202ENST00000606885 PROSER2Q86WR7 435 aaPredicted RBP14.94□□□□□ -0.02
AP002856.2-202ENST00000606885 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
AP002856.2-202ENST00000606885 KCNA6P17658 529 aa14.93□□□□□ -0.02
AP002856.2-202ENST00000606885 NGLY1Q96IV0 654 aa14.93□□□□□ -0.02
AP002856.2-202ENST00000606885 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
AP002856.2-202ENST00000606885 MSH6P52701 1360 aa14.93□□□□□ -0.02
AP002856.2-202ENST00000606885 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
AP002856.2-202ENST00000606885 EP400Q96L91 3159 aa14.92□□□□□ -0.02
AP002856.2-202ENST00000606885 LRP5O75197 1615 aa14.92□□□□□ -0.02
AP002856.2-202ENST00000606885 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
AP002856.2-202ENST00000606885 SHPRHQ149N8 1683 aa14.91□□□□□ -0.02
AP002856.2-202ENST00000606885 PLEKHH2Q8IVE3 1493 aa14.91□□□□□ -0.02
AP002856.2-202ENST00000606885 DHX29Q7Z478 1369 aaKnown RBP14.9□□□□□ -0.02
AP002856.2-202ENST00000606885 CDC42BPAQ5VT25 1732 aa14.9□□□□□ -0.02
AP002856.2-202ENST00000606885 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
AP002856.2-202ENST00000606885 ABCC3O15438 1527 aa14.89□□□□□ -0.03
AP002856.2-202ENST00000606885 KIF3BO15066 747 aa14.89□□□□□ -0.03
AP002856.2-202ENST00000606885 LTKP29376 864 aa14.89□□□□□ -0.03
AP002856.2-202ENST00000606885 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
AP002856.2-202ENST00000606885 PRDM15P57071 1507 aaPredicted RBP14.87□□□□□ -0.03
AP002856.2-202ENST00000606885 ARHGAP23Q9P227 1491 aa14.86□□□□□ -0.03
AP002856.2-202ENST00000606885 SLIT1O75093 1534 aa14.86□□□□□ -0.03
AP002856.2-202ENST00000606885 YY1P25490 414 aa14.85□□□□□ -0.03
AP002856.2-202ENST00000606885 TIAM1Q13009 1591 aa14.85□□□□□ -0.03
AP002856.2-202ENST00000606885 RTEL1-TNFRSF6BF6WH68 1400 aa14.84□□□□□ -0.03
AP002856.2-202ENST00000606885 UBR1Q8IWV7 1749 aa14.83□□□□□ -0.03
AP002856.2-202ENST00000606885 NKTRP30414 1462 aaKnown RBP14.83□□□□□ -0.03
AP002856.2-202ENST00000606885 AHDC1Q5TGY3 1603 aaPredicted RBP14.83□□□□□ -0.04
AP002856.2-202ENST00000606885 NWD1Q149M9 1564 aa14.81□□□□□ -0.04
AP002856.2-202ENST00000606885 C8orf37Q96NL8 207 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms