RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 NPM1P06748 294 aaKnown RBP eCLIP21.96■■□□□ 1.11
CTSA-214ENST00000606788 IRX6P78412 446 aaPredicted RBP21.95■■□□□ 1.11
CTSA-214ENST00000606788 SPATA31E1Q6ZUB1 1445 aa21.95■■□□□ 1.1
CTSA-214ENST00000606788 KIF3BO15066 747 aa21.95■■□□□ 1.1
CTSA-214ENST00000606788 ROCK2O75116 1388 aaKnown RBP21.94■■□□□ 1.1
CTSA-214ENST00000606788 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
CTSA-214ENST00000606788 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
CTSA-214ENST00000606788 PLA2R1Q13018 1463 aa21.89■■□□□ 1.09
CTSA-214ENST00000606788 ASXL2Q76L83 1435 aa21.88■■□□□ 1.09
CTSA-214ENST00000606788 WDR7Q9Y4E6 1490 aa21.88■■□□□ 1.09
CTSA-214ENST00000606788 FANCAO15360 1455 aa21.87■■□□□ 1.09
CTSA-214ENST00000606788 UHRF1BP1LA0JNW5 1464 aa21.86■■□□□ 1.09
CTSA-214ENST00000606788 BCORL1Q5H9F3 1711 aa21.85■■□□□ 1.09
CTSA-214ENST00000606788 CYB5RLQ6IPT4 315 aa21.83■■□□□ 1.09
CTSA-214ENST00000606788 CHGAP10645 457 aaKnown RBP21.83■■□□□ 1.08
CTSA-214ENST00000606788 ABCC1P33527 1531 aa21.83■■□□□ 1.08
CTSA-214ENST00000606788 KDM5DQ9BY66 1539 aa21.82■■□□□ 1.08
CTSA-214ENST00000606788 GGT6Q6P531 493 aa21.82■■□□□ 1.08
CTSA-214ENST00000606788 NEFLP07196 543 aa21.81■■□□□ 1.08
CTSA-214ENST00000606788 ADGRL1O94910 1474 aa21.8■■□□□ 1.08
CTSA-214ENST00000606788 DUOX2Q9NRD8 1548 aa21.79■■□□□ 1.08
CTSA-214ENST00000606788 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
CTSA-214ENST00000606788 RALGAPBQ86X10 1494 aa21.78■■□□□ 1.08
CTSA-214ENST00000606788 SALL2Q9Y467 1007 aaPredicted RBP21.77■■□□□ 1.08
CTSA-214ENST00000606788 A2MP01023 1474 aa21.77■■□□□ 1.08
CTSA-214ENST00000606788 KDM5CP41229 1560 aa21.76■■□□□ 1.07
CTSA-214ENST00000606788 UHRF1BP1Q6BDS2 1440 aa21.75■■□□□ 1.07
CTSA-214ENST00000606788 PRAG1Q86YV5 1406 aa21.75■■□□□ 1.07
CTSA-214ENST00000606788 DHX29Q7Z478 1369 aaKnown RBP21.74■■□□□ 1.07
CTSA-214ENST00000606788 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
CTSA-214ENST00000606788 ERBINQ96RT1 1412 aa21.74■■□□□ 1.07
CTSA-214ENST00000606788 CC2D1BQ5T0F9 858 aaKnown RBP21.73■■□□□ 1.07
CTSA-214ENST00000606788 PLXNC1O60486 1568 aa21.72■■□□□ 1.07
CTSA-214ENST00000606788 TMC1Q8TDI8 760 aa21.71■■□□□ 1.07
CTSA-214ENST00000606788 NUTM2DQ5VT03 806 aaPredicted RBP21.71■■□□□ 1.07
CTSA-214ENST00000606788 UNC13BO14795 1591 aa21.71■■□□□ 1.07
CTSA-214ENST00000606788 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.06
CTSA-214ENST00000606788 CD109Q6YHK3 1445 aa21.68■■□□□ 1.06
CTSA-214ENST00000606788 DISP3Q9P2K9 1392 aa21.67■■□□□ 1.06
CTSA-214ENST00000606788 ATP7AQ04656 1500 aa21.67■■□□□ 1.06
CTSA-214ENST00000606788 KANK1Q14678 1352 aa21.67■■□□□ 1.06
CTSA-214ENST00000606788 IQGAP3Q86VI3 1631 aa21.66■■□□□ 1.06
CTSA-214ENST00000606788 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
CTSA-214ENST00000606788 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
CTSA-214ENST00000606788 PANK3Q9H999 370 aa21.63■■□□□ 1.05
CTSA-214ENST00000606788 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
CTSA-214ENST00000606788 TESK2Q96S53 571 aa21.63■■□□□ 1.05
CTSA-214ENST00000606788 ATP10AO60312 1499 aa21.62■■□□□ 1.05
CTSA-214ENST00000606788 RTEL1-TNFRSF6BF6WH68 1400 aa21.6■■□□□ 1.05
CTSA-214ENST00000606788 ABCA9Q8IUA7 1624 aa21.6■■□□□ 1.05
CTSA-214ENST00000606788 E9PCH4 1651 aa21.59■■□□□ 1.05
CTSA-214ENST00000606788 ADGRF5Q8IZF2 1346 aa21.59■■□□□ 1.05
CTSA-214ENST00000606788 TMF1P82094 1093 aa21.58■■□□□ 1.04
CTSA-214ENST00000606788 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.04
CTSA-214ENST00000606788 WASHC2CQ9Y4E1 1318 aa21.57■■□□□ 1.04
CTSA-214ENST00000606788 TRPM1Q7Z4N2 1603 aa21.57■■□□□ 1.04
CTSA-214ENST00000606788 PNISRQ8TF01 805 aaKnown RBP21.54■■□□□ 1.04
CTSA-214ENST00000606788 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
CTSA-214ENST00000606788 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
CTSA-214ENST00000606788 POLR1AO95602 1720 aaPredicted RBP21.53■■□□□ 1.04
CTSA-214ENST00000606788 TMEM132EQ6IEE7 984 aa21.52■■□□□ 1.04
CTSA-214ENST00000606788 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
CTSA-214ENST00000606788 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
CTSA-214ENST00000606788 CLTCL1P53675 1640 aa21.51■■□□□ 1.03
CTSA-214ENST00000606788 INO80Q9ULG1 1556 aaPredicted RBP21.51■■□□□ 1.03
CTSA-214ENST00000606788 ZNF518AQ6AHZ1 1483 aa21.5■■□□□ 1.03
CTSA-214ENST00000606788 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
CTSA-214ENST00000606788 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
CTSA-214ENST00000606788 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
CTSA-214ENST00000606788 PER1O15534 1290 aaPredicted RBP21.49■■□□□ 1.03
CTSA-214ENST00000606788 TRAK1Q9UPV9 953 aa21.49■■□□□ 1.03
CTSA-214ENST00000606788 GPRASP1Q5JY77 1395 aa21.49■■□□□ 1.03
CTSA-214ENST00000606788 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
CTSA-214ENST00000606788 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
CTSA-214ENST00000606788 MLECQ14165 292 aa21.48■■□□□ 1.03
CTSA-214ENST00000606788 SAFB2Q14151 953 aaKnown RBP eCLIP21.48■■□□□ 1.03
CTSA-214ENST00000606788 POGZQ7Z3K3 1410 aa21.45■■□□□ 1.03
CTSA-214ENST00000606788 RALBP1Q15311 655 aa21.45■■□□□ 1.02
CTSA-214ENST00000606788 PRDM15P57071 1507 aaPredicted RBP21.45■■□□□ 1.02
CTSA-214ENST00000606788 B4GALNT3Q6L9W6 998 aa21.44■■□□□ 1.02
CTSA-214ENST00000606788 TRPM2O94759 1503 aa21.44■■□□□ 1.02
CTSA-214ENST00000606788 PTPRTO14522 1441 aa21.44■■□□□ 1.02
CTSA-214ENST00000606788 COL17A1Q9UMD9 1497 aaPredicted RBP21.43■■□□□ 1.02
CTSA-214ENST00000606788 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
CTSA-214ENST00000606788 SPHKAPQ2M3C7 1700 aa21.43■■□□□ 1.02
CTSA-214ENST00000606788 NLRP13Q86W25 1043 aa21.42■■□□□ 1.02
CTSA-214ENST00000606788 NOS1P29475 1434 aa21.41■■□□□ 1.02
CTSA-214ENST00000606788 MROH1Q8NDA8 1641 aa21.41■■□□□ 1.02
CTSA-214ENST00000606788 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
CTSA-214ENST00000606788 TET3O43151 1660 aa21.4■■□□□ 1.02
CTSA-214ENST00000606788 NPATQ14207 1427 aa21.4■■□□□ 1.02
CTSA-214ENST00000606788 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
CTSA-214ENST00000606788 CEP152O94986 1710 aa21.39■■□□□ 1.02
CTSA-214ENST00000606788 STK26Q9P289 416 aa21.39■■□□□ 1.01
CTSA-214ENST00000606788 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
CTSA-214ENST00000606788 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
CTSA-214ENST00000606788 MADDQ8WXG6 1647 aa21.37■■□□□ 1.01
CTSA-214ENST00000606788 PPRC1Q5VV67 1664 aaKnown RBP21.37■■□□□ 1.01
CTSA-214ENST00000606788 CDCA7LQ96GN5 454 aa21.36■■□□□ 1.01
CTSA-214ENST00000606788 EIF2AK4Q9P2K8 1649 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms