RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 IQGAP3Q86VI3 1631 aa31.03■■■□□ 2.56
USP6NL-204ENST00000606752 HECW2Q9P2P5 1572 aa31.03■■■□□ 2.56
USP6NL-204ENST00000606752 KIF3BO15066 747 aa31.01■■■□□ 2.55
USP6NL-204ENST00000606752 A2MP01023 1474 aa31■■■□□ 2.55
USP6NL-204ENST00000606752 PPRC1Q5VV67 1664 aaKnown RBP30.99■■■□□ 2.55
USP6NL-204ENST00000606752 EIF2AK4Q9P2K8 1649 aaKnown RBP30.98■■■□□ 2.55
USP6NL-204ENST00000606752 RICTORQ6R327 1708 aa30.97■■■□□ 2.55
USP6NL-204ENST00000606752 TSPOAP1O95153 1857 aa30.97■■■□□ 2.55
USP6NL-204ENST00000606752 L3MBTL2Q969R5 705 aa30.96■■■□□ 2.55
USP6NL-204ENST00000606752 KIF13AQ9H1H9 1805 aa30.95■■■□□ 2.55
USP6NL-204ENST00000606752 DEPDC5O75140 1603 aa30.95■■■□□ 2.54
USP6NL-204ENST00000606752 KANK1Q14678 1352 aa30.93■■■□□ 2.54
USP6NL-204ENST00000606752 ABCA6Q8N139 1617 aa30.89■■■□□ 2.54
USP6NL-204ENST00000606752 FRMPD1Q5SYB0 1578 aa30.89■■■□□ 2.53
USP6NL-204ENST00000606752 VWDEQ8N2E2 1590 aa30.87■■■□□ 2.53
USP6NL-204ENST00000606752 PRDM15P57071 1507 aaPredicted RBP30.86■■■□□ 2.53
USP6NL-204ENST00000606752 ZMYM4Q5VZL5 1548 aa30.85■■■□□ 2.53
USP6NL-204ENST00000606752 DIP2CQ9Y2E4 1556 aa30.85■■■□□ 2.53
USP6NL-204ENST00000606752 PLA2R1Q13018 1463 aa30.84■■■□□ 2.53
USP6NL-204ENST00000606752 ATP10AO60312 1499 aa30.83■■■□□ 2.53
USP6NL-204ENST00000606752 MROH1Q8NDA8 1641 aa30.83■■■□□ 2.53
USP6NL-204ENST00000606752 YEATS2Q9ULM3 1422 aa30.82■■■□□ 2.52
USP6NL-204ENST00000606752 CCDC144AA2RUR9 1427 aa30.81■■■□□ 2.52
USP6NL-204ENST00000606752 DNAJC5Q9H3Z4 198 aa30.8■■■□□ 2.52
USP6NL-204ENST00000606752 RNF17Q9BXT8 1623 aaKnown RBP30.8■■■□□ 2.52
USP6NL-204ENST00000606752 BCORL1Q5H9F3 1711 aa30.78■■■□□ 2.52
USP6NL-204ENST00000606752 TET3O43151 1660 aa30.77■■■□□ 2.52
USP6NL-204ENST00000606752 DIEXFQ68CQ4 756 aaKnown RBP30.77■■■□□ 2.52
USP6NL-204ENST00000606752 GGT6Q6P531 493 aa30.76■■■□□ 2.51
USP6NL-204ENST00000606752 E9PCH4 1651 aa30.74■■■□□ 2.51
USP6NL-204ENST00000606752 COL17A1Q9UMD9 1497 aaPredicted RBP30.74■■■□□ 2.51
USP6NL-204ENST00000606752 LMTK2Q8IWU2 1503 aa30.74■■■□□ 2.51
USP6NL-204ENST00000606752 PTPRTO14522 1441 aa30.72■■■□□ 2.51
USP6NL-204ENST00000606752 NBPF8Q3BBV2 869 aa30.7■■■□□ 2.51
USP6NL-204ENST00000606752 WASHC2CQ9Y4E1 1318 aa30.66■■■□□ 2.5
USP6NL-204ENST00000606752 EFCAB6Q5THR3 1501 aa30.66■■■□□ 2.5
USP6NL-204ENST00000606752 TRPM2O94759 1503 aa30.65■■■□□ 2.5
USP6NL-204ENST00000606752 DCAF11Q8TEB1 546 aa30.62■■■□□ 2.49
USP6NL-204ENST00000606752 REREQ9P2R6 1566 aa30.62■■■□□ 2.49
USP6NL-204ENST00000606752 UHRF1BP1Q6BDS2 1440 aa30.62■■■□□ 2.49
USP6NL-204ENST00000606752 TRHP20396 242 aaPredicted RBP30.61■■■□□ 2.49
USP6NL-204ENST00000606752 SPHKAPQ2M3C7 1700 aa30.61■■■□□ 2.49
USP6NL-204ENST00000606752 ABCC3O15438 1527 aa30.6■■■□□ 2.49
USP6NL-204ENST00000606752 CEP152O94986 1710 aa30.6■■■□□ 2.49
USP6NL-204ENST00000606752 RGL3Q3MIN7 710 aa30.6■■■□□ 2.49
USP6NL-204ENST00000606752 KDM2AQ9Y2K7 1162 aa30.58■■■□□ 2.49
USP6NL-204ENST00000606752 AGLP35573 1532 aa30.57■■■□□ 2.48
USP6NL-204ENST00000606752 NPATQ14207 1427 aa30.55■■■□□ 2.48
USP6NL-204ENST00000606752 ZNF326Q5BKZ1 582 aaKnown RBP30.55■■■□□ 2.48
USP6NL-204ENST00000606752 EIF4G2P78344 907 aaKnown RBP eCLIP30.54■■■□□ 2.48
USP6NL-204ENST00000606752 HIRIP3Q9BW71 556 aaPredicted RBP30.54■■■□□ 2.48
USP6NL-204ENST00000606752 SPATA31E1Q6ZUB1 1445 aa30.54■■■□□ 2.48
USP6NL-204ENST00000606752 ARHGEF40Q8TER5 1519 aa30.53■■■□□ 2.48
USP6NL-204ENST00000606752 PPP6R1Q9UPN7 881 aa30.52■■■□□ 2.48
USP6NL-204ENST00000606752 CLTCL1P53675 1640 aa30.5■■■□□ 2.47
USP6NL-204ENST00000606752 HSPA5P11021 654 aaKnown RBP30.5■■■□□ 2.47
USP6NL-204ENST00000606752 ARHGAP31Q2M1Z3 1444 aa30.5■■■□□ 2.47
USP6NL-204ENST00000606752 ZC3H13Q5T200 1668 aaKnown RBP30.49■■■□□ 2.47
USP6NL-204ENST00000606752 CAMSAP1Q5T5Y3 1602 aa30.47■■■□□ 2.47
USP6NL-204ENST00000606752 CNTLNQ9NXG0 1405 aa30.46■■■□□ 2.47
USP6NL-204ENST00000606752 STAC3Q96MF2 364 aa30.45■■■□□ 2.47
USP6NL-204ENST00000606752 RALGAPBQ86X10 1494 aa30.45■■■□□ 2.46
USP6NL-204ENST00000606752 PRAG1Q86YV5 1406 aa30.44■■■□□ 2.46
USP6NL-204ENST00000606752 NEURL4Q96JN8 1562 aa30.43■■■□□ 2.46
USP6NL-204ENST00000606752 NOS1P29475 1434 aa30.42■■■□□ 2.46
USP6NL-204ENST00000606752 UGGT1Q9NYU2 1555 aa30.4■■■□□ 2.46
USP6NL-204ENST00000606752 SIGLEC1Q9BZZ2 1709 aa30.38■■■□□ 2.45
USP6NL-204ENST00000606752 CARD11Q9BXL7 1154 aa30.36■■■□□ 2.45
USP6NL-204ENST00000606752 CFAP65Q6ZU64 1925 aaKnown RBP30.35■■■□□ 2.45
USP6NL-204ENST00000606752 MLECQ14165 292 aa30.34■■■□□ 2.45
USP6NL-204ENST00000606752 ROCK2O75116 1388 aaKnown RBP30.33■■■□□ 2.45
USP6NL-204ENST00000606752 USP47Q96K76 1375 aa30.33■■■□□ 2.45
USP6NL-204ENST00000606752 KIF1BO60333 1816 aa30.32■■■□□ 2.45
USP6NL-204ENST00000606752 DDX10Q13206 875 aaKnown RBP30.31■■■□□ 2.44
USP6NL-204ENST00000606752 SLC52A1Q9NWF4 448 aa30.3■■■□□ 2.44
USP6NL-204ENST00000606752 ARID4BQ4LE39 1312 aaPredicted RBP30.29■■■□□ 2.44
USP6NL-204ENST00000606752 TRPM1Q7Z4N2 1603 aa30.29■■■□□ 2.44
USP6NL-204ENST00000606752 CHGAP10645 457 aaKnown RBP30.29■■■□□ 2.44
USP6NL-204ENST00000606752 SYNMO15061 1565 aa30.28■■■□□ 2.44
USP6NL-204ENST00000606752 GPRASP1Q5JY77 1395 aa30.28■■■□□ 2.44
USP6NL-204ENST00000606752 MIER1Q8N108 512 aa30.28■■■□□ 2.44
USP6NL-204ENST00000606752 ADGRB3O60242 1522 aa30.27■■■□□ 2.44
USP6NL-204ENST00000606752 NBPF1Q3BBV0 1214 aa30.27■■■□□ 2.44
USP6NL-204ENST00000606752 ESF1Q9H501 851 aaKnown RBP30.25■■■□□ 2.43
USP6NL-204ENST00000606752 PIK3C2BO00750 1634 aa30.25■■■□□ 2.43
USP6NL-204ENST00000606752 IDI1Q13907 227 aa30.24■■■□□ 2.43
USP6NL-204ENST00000606752 WASHC2AQ641Q2 1341 aa30.24■■■□□ 2.43
USP6NL-204ENST00000606752 FBXO31Q5XUX0 539 aaPredicted RBP30.24■■■□□ 2.43
USP6NL-204ENST00000606752 RPGRIP1LQ68CZ1 1315 aa30.23■■■□□ 2.43
USP6NL-204ENST00000606752 CLTCQ00610 1675 aaKnown RBP30.23■■■□□ 2.43
USP6NL-204ENST00000606752 MADDQ8WXG6 1647 aa30.23■■■□□ 2.43
USP6NL-204ENST00000606752 PREX1Q8TCU6 1659 aa30.22■■■□□ 2.43
USP6NL-204ENST00000606752 MYOM2P54296 1465 aa30.22■■■□□ 2.43
USP6NL-204ENST00000606752 ERVK-7P63135 1459 aa30.21■■■□□ 2.43
USP6NL-204ENST00000606752 MROH2AA6NES4 1674 aa30.21■■■□□ 2.43
USP6NL-204ENST00000606752 C11orf95C9JLR9 678 aaPredicted RBP30.19■■■□□ 2.42
USP6NL-204ENST00000606752 LAMC1P11047 1609 aa30.17■■■□□ 2.42
USP6NL-204ENST00000606752 ZMYM3Q14202 1370 aa30.17■■■□□ 2.42
USP6NL-204ENST00000606752 CCDC7Q96M83 1385 aa30.17■■■□□ 2.42
USP6NL-204ENST00000606752 ADGRF5Q8IZF2 1346 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms