RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 DISP3Q9P2K9 1392 aa28.81■■■□□ 2.2
CCDC12-213ENST00000605875 FBXO31Q5XUX0 539 aaPredicted RBP28.78■■■□□ 2.2
CCDC12-213ENST00000605875 DNMT1P26358 1616 aaKnown RBP28.78■■■□□ 2.2
CCDC12-213ENST00000605875 TSPY4P0CV99 314 aa28.77■■■□□ 2.2
CCDC12-213ENST00000605875 TSPY10P0CW01 314 aa28.77■■■□□ 2.2
CCDC12-213ENST00000605875 KDM5DQ9BY66 1539 aa28.77■■■□□ 2.2
CCDC12-213ENST00000605875 ARHGEF5Q12774 1597 aa28.76■■■□□ 2.19
CCDC12-213ENST00000605875 WASHC2CQ9Y4E1 1318 aa28.76■■■□□ 2.19
CCDC12-213ENST00000605875 TNRQ92752 1358 aa28.75■■■□□ 2.19
CCDC12-213ENST00000605875 FAM135AQ9P2D6 1515 aa28.75■■■□□ 2.19
CCDC12-213ENST00000605875 LRRC9Q6ZRR7 1453 aa28.75■■■□□ 2.19
CCDC12-213ENST00000605875 PZPP20742 1482 aa28.73■■■□□ 2.19
CCDC12-213ENST00000605875 MAP3K1Q13233 1512 aa28.71■■■□□ 2.19
CCDC12-213ENST00000605875 UBAP1LF5GYI3 381 aa28.7■■■□□ 2.18
CCDC12-213ENST00000605875 ILDR2Q71H61 639 aa28.68■■■□□ 2.18
CCDC12-213ENST00000605875 POLR1AO95602 1720 aaPredicted RBP28.67■■■□□ 2.18
CCDC12-213ENST00000605875 MIA2Q96PC5 1412 aa28.65■■■□□ 2.18
CCDC12-213ENST00000605875 SPATA31D1Q6ZQQ2 1576 aa28.65■■■□□ 2.18
CCDC12-213ENST00000605875 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
CCDC12-213ENST00000605875 NEURL4Q96JN8 1562 aa28.62■■■□□ 2.17
CCDC12-213ENST00000605875 MAST1Q9Y2H9 1570 aa28.62■■■□□ 2.17
CCDC12-213ENST00000605875 THEMISQ8N1K5 641 aaPredicted RBP28.62■■■□□ 2.17
CCDC12-213ENST00000605875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.62■■■□□ 2.17
CCDC12-213ENST00000605875 NLRP1Q9C000 1473 aa28.61■■■□□ 2.17
CCDC12-213ENST00000605875 ANKLE2Q86XL3 938 aa28.61■■■□□ 2.17
CCDC12-213ENST00000605875 RNF17Q9BXT8 1623 aaKnown RBP28.6■■■□□ 2.17
CCDC12-213ENST00000605875 UGGT1Q9NYU2 1555 aa28.58■■■□□ 2.17
CCDC12-213ENST00000605875 MYOM3Q5VTT5 1437 aa28.57■■■□□ 2.16
CCDC12-213ENST00000605875 ZC3H13Q5T200 1668 aaKnown RBP28.55■■■□□ 2.16
CCDC12-213ENST00000605875 EIF2AK4Q9P2K8 1649 aaKnown RBP28.55■■■□□ 2.16
CCDC12-213ENST00000605875 ABCC3O15438 1527 aa28.55■■■□□ 2.16
CCDC12-213ENST00000605875 CPS1P31327 1500 aa28.54■■■□□ 2.16
CCDC12-213ENST00000605875 SHANK2Q9UPX8 1470 aa28.54■■■□□ 2.16
CCDC12-213ENST00000605875 SOCS7O14512 581 aa28.53■■■□□ 2.16
CCDC12-213ENST00000605875 NPHP4O75161 1426 aaPredicted RBP28.51■■■□□ 2.15
CCDC12-213ENST00000605875 DEPDC5O75140 1603 aa28.51■■■□□ 2.15
CCDC12-213ENST00000605875 MED14O60244 1454 aa28.5■■■□□ 2.15
CCDC12-213ENST00000605875 MROH1Q8NDA8 1641 aa28.49■■■□□ 2.15
CCDC12-213ENST00000605875 DUOX2Q9NRD8 1548 aa28.48■■■□□ 2.15
CCDC12-213ENST00000605875 ERVK-7P63135 1459 aa28.47■■■□□ 2.15
CCDC12-213ENST00000605875 SCAF1Q9H7N4 1312 aaKnown RBP28.47■■■□□ 2.15
CCDC12-213ENST00000605875 CEP152O94986 1710 aa28.47■■■□□ 2.15
CCDC12-213ENST00000605875 VWDEQ8N2E2 1590 aa28.47■■■□□ 2.15
CCDC12-213ENST00000605875 TOM1O60784 492 aa28.47■■■□□ 2.15
CCDC12-213ENST00000605875 CFAP65Q6ZU64 1925 aaKnown RBP28.47■■■□□ 2.15
CCDC12-213ENST00000605875 PIP4K2BP78356 416 aa28.46■■■□□ 2.15
CCDC12-213ENST00000605875 APLP2Q06481 763 aa28.46■■■□□ 2.15
CCDC12-213ENST00000605875 IQGAP1P46940 1657 aa28.44■■■□□ 2.14
CCDC12-213ENST00000605875 KIF15Q9NS87 1388 aa28.4■■■□□ 2.14
CCDC12-213ENST00000605875 HSPA1LP34931 641 aa28.4■■■□□ 2.14
CCDC12-213ENST00000605875 ABCC5O15440 1437 aa28.4■■■□□ 2.14
CCDC12-213ENST00000605875 RRP7BPQ9NSQ0 103 aa28.39■■■□□ 2.14
CCDC12-213ENST00000605875 PTPN23Q9H3S7 1636 aa28.39■■■□□ 2.13
CCDC12-213ENST00000605875 CROCC2H7BZ55 1655 aa28.38■■■□□ 2.13
CCDC12-213ENST00000605875 UBR1Q8IWV7 1749 aa28.37■■■□□ 2.13
CCDC12-213ENST00000605875 ERBINQ96RT1 1412 aa28.36■■■□□ 2.13
CCDC12-213ENST00000605875 PRDM15P57071 1507 aaPredicted RBP28.35■■■□□ 2.13
CCDC12-213ENST00000605875 STRCP1A6NGW2 1772 aa28.34■■■□□ 2.13
CCDC12-213ENST00000605875 ARHGAP31Q2M1Z3 1444 aa28.34■■■□□ 2.13
CCDC12-213ENST00000605875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.33■■■□□ 2.137e-8■■■■□ 24.8
CCDC12-213ENST00000605875 DAPK1P53355 1430 aa28.33■■■□□ 2.13
CCDC12-213ENST00000605875 FGD6Q6ZV73 1430 aa28.32■■■□□ 2.12
CCDC12-213ENST00000605875 SCAF11Q99590 1463 aaKnown RBP28.3■■■□□ 2.12
CCDC12-213ENST00000605875 ALKQ9UM73 1620 aa28.29■■■□□ 2.12
CCDC12-213ENST00000605875 LRRC7Q96NW7 1537 aa28.28■■■□□ 2.12
CCDC12-213ENST00000605875 TXNDC2Q86VQ3 553 aa28.28■■■□□ 2.12
CCDC12-213ENST00000605875 KANK1Q14678 1352 aa28.27■■■□□ 2.12
CCDC12-213ENST00000605875 LTKP29376 864 aa28.27■■■□□ 2.12
CCDC12-213ENST00000605875 CHIC2Q9UKJ5 165 aa28.27■■■□□ 2.12
CCDC12-213ENST00000605875 SLIT1O75093 1534 aa28.27■■■□□ 2.12
CCDC12-213ENST00000605875 ARHGAP23Q9P227 1491 aa28.27■■■□□ 2.12
CCDC12-213ENST00000605875 SYNMO15061 1565 aa28.25■■■□□ 2.11
CCDC12-213ENST00000605875 ANKRD30AQ9BXX3 1397 aa28.24■■■□□ 2.11
CCDC12-213ENST00000605875 MED1Q15648 1581 aaPredicted RBP28.24■■■□□ 2.11
CCDC12-213ENST00000605875 EID1Q9Y6B2 187 aa28.23■■■□□ 2.11
CCDC12-213ENST00000605875 PIK3C2BO00750 1634 aa28.22■■■□□ 2.11
CCDC12-213ENST00000605875 STAG3Q9UJ98 1225 aa28.22■■■□□ 2.11
CCDC12-213ENST00000605875 LMTK2Q8IWU2 1503 aa28.18■■■□□ 2.1
CCDC12-213ENST00000605875 TMEM2Q9UHN6 1383 aa28.17■■■□□ 2.1
CCDC12-213ENST00000605875 SENP3Q9H4L4 574 aaPredicted RBP28.17■■■□□ 2.1
CCDC12-213ENST00000605875 IDI1Q13907 227 aa28.15■■■□□ 2.1
CCDC12-213ENST00000605875 KDM5AP29375 1690 aaKnown RBP28.13■■■□□ 2.09
CCDC12-213ENST00000605875 EFCAB6Q5THR3 1501 aa28.13■■■□□ 2.09
CCDC12-213ENST00000605875 XIRP1Q702N8 1843 aaKnown RBP28.11■■■□□ 2.09
CCDC12-213ENST00000605875 ADGRL2O95490 1459 aa28.1■■■□□ 2.09
CCDC12-213ENST00000605875 FAM50AQ14320 339 aaKnown RBP28.1■■■□□ 2.09
CCDC12-213ENST00000605875 PHF23Q9BUL5 403 aaPredicted RBP28.09■■■□□ 2.09
CCDC12-213ENST00000605875 NOS1P29475 1434 aa28.08■■■□□ 2.09
CCDC12-213ENST00000605875 SLC52A1Q9NWF4 448 aa28.03■■■□□ 2.08
CCDC12-213ENST00000605875 ADGRB3O60242 1522 aa28.02■■■□□ 2.08
CCDC12-213ENST00000605875 ANKRD50Q9ULJ7 1429 aa28.02■■■□□ 2.08
CCDC12-213ENST00000605875 KCNA6P17658 529 aa28.02■■■□□ 2.08
CCDC12-213ENST00000605875 SLC26A8Q96RN1 970 aa28.02■■■□□ 2.08
CCDC12-213ENST00000605875 TET3O43151 1660 aa28.02■■■□□ 2.08
CCDC12-213ENST00000605875 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
CCDC12-213ENST00000605875 RPRD2Q5VT52 1461 aaKnown RBP27.98■■■□□ 2.07
CCDC12-213ENST00000605875 PROSER2Q86WR7 435 aaPredicted RBP27.98■■■□□ 2.07
CCDC12-213ENST00000605875 BCANQ96GW7 911 aa27.97■■■□□ 2.07
CCDC12-213ENST00000605875 FAM135BQ49AJ0 1406 aa27.95■■■□□ 2.07
CCDC12-213ENST00000605875 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms