RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
UBE3B-213ENST00000605142 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
UBE3B-213ENST00000605142 DNMT1P26358 1616 aaKnown RBP19.16■□□□□ 0.66
UBE3B-213ENST00000605142 HSPA1LP34931 641 aa19.16■□□□□ 0.66
UBE3B-213ENST00000605142 GGT6Q6P531 493 aa19.16■□□□□ 0.66
UBE3B-213ENST00000605142 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
UBE3B-213ENST00000605142 CCDC141Q6ZP82 1450 aa19.13■□□□□ 0.65
UBE3B-213ENST00000605142 SHANK2Q9UPX8 1470 aa19.13■□□□□ 0.65
UBE3B-213ENST00000605142 MAP3K1Q13233 1512 aa19.13■□□□□ 0.65
UBE3B-213ENST00000605142 FAM135AQ9P2D6 1515 aa19.12■□□□□ 0.65
UBE3B-213ENST00000605142 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
UBE3B-213ENST00000605142 POLR1AO95602 1720 aaPredicted RBP19.11■□□□□ 0.65
UBE3B-213ENST00000605142 LRRC9Q6ZRR7 1453 aa19.11■□□□□ 0.65
UBE3B-213ENST00000605142 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
UBE3B-213ENST00000605142 ARHGEF5Q12774 1597 aa19.09■□□□□ 0.65
UBE3B-213ENST00000605142 PIP4K2BP78356 416 aa19.08■□□□□ 0.64
UBE3B-213ENST00000605142 KANK4Q5T7N3 995 aaPredicted RBP19.08■□□□□ 0.64
UBE3B-213ENST00000605142 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
UBE3B-213ENST00000605142 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
UBE3B-213ENST00000605142 TNRQ92752 1358 aa19.06■□□□□ 0.64
UBE3B-213ENST00000605142 MED14O60244 1454 aa19.06■□□□□ 0.64
UBE3B-213ENST00000605142 PZPP20742 1482 aa19.06■□□□□ 0.64
UBE3B-213ENST00000605142 THEMISQ8N1K5 641 aaPredicted RBP19.05■□□□□ 0.64
UBE3B-213ENST00000605142 KIF3BO15066 747 aa19.04■□□□□ 0.64
UBE3B-213ENST00000605142 VWDEQ8N2E2 1590 aa19.04■□□□□ 0.64
UBE3B-213ENST00000605142 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
UBE3B-213ENST00000605142 NLRP1Q9C000 1473 aa19.03■□□□□ 0.64
UBE3B-213ENST00000605142 APLP2Q06481 763 aa19.02■□□□□ 0.64
UBE3B-213ENST00000605142 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
UBE3B-213ENST00000605142 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
UBE3B-213ENST00000605142 KDM5DQ9BY66 1539 aa19.01■□□□□ 0.63
UBE3B-213ENST00000605142 ALKQ9UM73 1620 aa19.01■□□□□ 0.63
UBE3B-213ENST00000605142 FBXO31Q5XUX0 539 aaPredicted RBP19.01■□□□□ 0.63
UBE3B-213ENST00000605142 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
UBE3B-213ENST00000605142 MIA2Q96PC5 1412 aa19■□□□□ 0.63
UBE3B-213ENST00000605142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.63
UBE3B-213ENST00000605142 NPHP4O75161 1426 aaPredicted RBP18.99■□□□□ 0.63
UBE3B-213ENST00000605142 MYOM3Q5VTT5 1437 aa18.98■□□□□ 0.63
UBE3B-213ENST00000605142 UGGT1Q9NYU2 1555 aa18.98■□□□□ 0.63
UBE3B-213ENST00000605142 RNF17Q9BXT8 1623 aaKnown RBP18.97■□□□□ 0.63
UBE3B-213ENST00000605142 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
UBE3B-213ENST00000605142 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
UBE3B-213ENST00000605142 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
UBE3B-213ENST00000605142 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
UBE3B-213ENST00000605142 IQGAP1P46940 1657 aa18.93■□□□□ 0.62
UBE3B-213ENST00000605142 ABCC3O15438 1527 aa18.93■□□□□ 0.62
UBE3B-213ENST00000605142 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
UBE3B-213ENST00000605142 SYNMO15061 1565 aa18.93■□□□□ 0.62
UBE3B-213ENST00000605142 EIF2AK4Q9P2K8 1649 aaKnown RBP18.91■□□□□ 0.62
UBE3B-213ENST00000605142 STRCP1A6NGW2 1772 aa18.88■□□□□ 0.61
UBE3B-213ENST00000605142 ABCC5O15440 1437 aa18.88■□□□□ 0.61
UBE3B-213ENST00000605142 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
UBE3B-213ENST00000605142 ZC3H13Q5T200 1668 aaKnown RBP18.88■□□□□ 0.61
UBE3B-213ENST00000605142 CEP152O94986 1710 aa18.88■□□□□ 0.61
UBE3B-213ENST00000605142 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
UBE3B-213ENST00000605142 DUOX2Q9NRD8 1548 aa18.85■□□□□ 0.61
UBE3B-213ENST00000605142 CFAP65Q6ZU64 1925 aaKnown RBP18.85■□□□□ 0.61
UBE3B-213ENST00000605142 RGS17Q9UGC6 210 aaPredicted RBP18.85■□□□□ 0.61
UBE3B-213ENST00000605142 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
UBE3B-213ENST00000605142 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.6
UBE3B-213ENST00000605142 KIF15Q9NS87 1388 aa18.82■□□□□ 0.6
UBE3B-213ENST00000605142 DAPK1P53355 1430 aa18.82■□□□□ 0.6
UBE3B-213ENST00000605142 PRDM15P57071 1507 aaPredicted RBP18.81■□□□□ 0.6
UBE3B-213ENST00000605142 FAM135BQ49AJ0 1406 aa18.8■□□□□ 0.6
UBE3B-213ENST00000605142 SCAF11Q99590 1463 aaKnown RBP18.79■□□□□ 0.6
UBE3B-213ENST00000605142 ARHGAP23Q9P227 1491 aa18.78■□□□□ 0.6
UBE3B-213ENST00000605142 ERBINQ96RT1 1412 aa18.78■□□□□ 0.6
UBE3B-213ENST00000605142 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
UBE3B-213ENST00000605142 SLIT1O75093 1534 aa18.78■□□□□ 0.6
UBE3B-213ENST00000605142 UBR1Q8IWV7 1749 aa18.77■□□□□ 0.6
UBE3B-213ENST00000605142 ARHGAP31Q2M1Z3 1444 aa18.75■□□□□ 0.59
UBE3B-213ENST00000605142 XIRP1Q702N8 1843 aaKnown RBP18.74■□□□□ 0.59
UBE3B-213ENST00000605142 LTKP29376 864 aa18.73■□□□□ 0.59
UBE3B-213ENST00000605142 TXNDC2Q86VQ3 553 aa18.73■□□□□ 0.59
UBE3B-213ENST00000605142 CHIC2Q9UKJ5 165 aa18.72■□□□□ 0.59
UBE3B-213ENST00000605142 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
UBE3B-213ENST00000605142 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
UBE3B-213ENST00000605142 LMTK2Q8IWU2 1503 aa18.69■□□□□ 0.58
UBE3B-213ENST00000605142 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
UBE3B-213ENST00000605142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBE3B-213ENST00000605142 PIK3C2BO00750 1634 aa18.69■□□□□ 0.58
UBE3B-213ENST00000605142 ADGRL2O95490 1459 aa18.69■□□□□ 0.58
UBE3B-213ENST00000605142 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
UBE3B-213ENST00000605142 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
UBE3B-213ENST00000605142 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
UBE3B-213ENST00000605142 KCNA6P17658 529 aa18.65■□□□□ 0.58
UBE3B-213ENST00000605142 TMEM94Q12767 1356 aa18.65■□□□□ 0.58
UBE3B-213ENST00000605142 FAM50AQ14320 339 aaKnown RBP18.64■□□□□ 0.57
UBE3B-213ENST00000605142 EFCAB6Q5THR3 1501 aa18.64■□□□□ 0.57
UBE3B-213ENST00000605142 NOS1P29475 1434 aa18.63■□□□□ 0.57
UBE3B-213ENST00000605142 ROBO1Q9Y6N7 1651 aa18.62■□□□□ 0.57
UBE3B-213ENST00000605142 KANK1Q14678 1352 aa18.61■□□□□ 0.57
UBE3B-213ENST00000605142 IDI1Q13907 227 aa18.61■□□□□ 0.57
UBE3B-213ENST00000605142 TET3O43151 1660 aa18.6■□□□□ 0.57
UBE3B-213ENST00000605142 NKTRP30414 1462 aaKnown RBP18.59■□□□□ 0.57
UBE3B-213ENST00000605142 ANKRD50Q9ULJ7 1429 aa18.58■□□□□ 0.57
UBE3B-213ENST00000605142 PROSER2Q86WR7 435 aaPredicted RBP18.58■□□□□ 0.56
UBE3B-213ENST00000605142 JCADQ9P266 1359 aa18.57■□□□□ 0.56
UBE3B-213ENST00000605142 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
UBE3B-213ENST00000605142 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms