RNA–Protein interactions for RNA: ENST00000604589.1

RPS28P1-201, Transcript of ribosomal protein S28 pseudogene 1, humanhuman

BASIC

Gene RPS28P1, Length 187 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P1-201ENST00000604589 CLTCQ00610 1675 aaKnown RBP11.72□□□□□ -0.53
RPS28P1-201ENST00000604589 RNF17Q9BXT8 1623 aaKnown RBP11.72□□□□□ -0.53
RPS28P1-201ENST00000604589 PZPP20742 1482 aa11.72□□□□□ -0.53
RPS28P1-201ENST00000604589 DAPK1P53355 1430 aa11.72□□□□□ -0.53
RPS28P1-201ENST00000604589 ERBINQ96RT1 1412 aa11.72□□□□□ -0.53
RPS28P1-201ENST00000604589 PTPRTO14522 1441 aa11.71□□□□□ -0.53
RPS28P1-201ENST00000604589 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.54
RPS28P1-201ENST00000604589 PLA2R1Q13018 1463 aa11.7□□□□□ -0.54
RPS28P1-201ENST00000604589 NCOA1Q15788 1441 aa11.7□□□□□ -0.54
RPS28P1-201ENST00000604589 KIF15Q9NS87 1388 aa11.7□□□□□ -0.54
RPS28P1-201ENST00000604589 WASHC2CQ9Y4E1 1318 aa11.7□□□□□ -0.54
RPS28P1-201ENST00000604589 CROCC2H7BZ55 1655 aa11.69□□□□□ -0.54
RPS28P1-201ENST00000604589 ZNF142P52746 1687 aaPredicted RBP11.69□□□□□ -0.54
RPS28P1-201ENST00000604589 ZC3H13Q5T200 1668 aaKnown RBP11.69□□□□□ -0.54
RPS28P1-201ENST00000604589 ANKRD30AQ9BXX3 1397 aa11.68□□□□□ -0.54
RPS28P1-201ENST00000604589 MYO3AQ8NEV4 1616 aa11.68□□□□□ -0.54
RPS28P1-201ENST00000604589 ABCC3O15438 1527 aa11.68□□□□□ -0.54
RPS28P1-201ENST00000604589 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
RPS28P1-201ENST00000604589 ADGRL2O95490 1459 aa11.68□□□□□ -0.54
RPS28P1-201ENST00000604589 TNRQ92752 1358 aa11.67□□□□□ -0.54
RPS28P1-201ENST00000604589 CEP170BQ9Y4F5 1589 aaPredicted RBP11.67□□□□□ -0.54
RPS28P1-201ENST00000604589 PRDM15P57071 1507 aaPredicted RBP11.67□□□□□ -0.54
RPS28P1-201ENST00000604589 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
RPS28P1-201ENST00000604589 PKD2Q13563 968 aa11.66□□□□□ -0.54
RPS28P1-201ENST00000604589 ILDR1Q86SU0 546 aaPredicted RBP11.66□□□□□ -0.54
RPS28P1-201ENST00000604589 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
RPS28P1-201ENST00000604589 MROH1Q8NDA8 1641 aa11.66□□□□□ -0.54
RPS28P1-201ENST00000604589 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
RPS28P1-201ENST00000604589 STRCQ7RTU9 1775 aa11.65□□□□□ -0.54
RPS28P1-201ENST00000604589 ARHGAP31Q2M1Z3 1444 aa11.65□□□□□ -0.54
RPS28P1-201ENST00000604589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.55
RPS28P1-201ENST00000604589 SPATA31D1Q6ZQQ2 1576 aa11.63□□□□□ -0.55
RPS28P1-201ENST00000604589 DEPDC5O75140 1603 aa11.63□□□□□ -0.55
RPS28P1-201ENST00000604589 KANK1Q14678 1352 aa11.63□□□□□ -0.55
RPS28P1-201ENST00000604589 LMTK2Q8IWU2 1503 aa11.62□□□□□ -0.55
RPS28P1-201ENST00000604589 RRP7BPQ9NSQ0 103 aa11.62□□□□□ -0.55
RPS28P1-201ENST00000604589 ERVK-7P63135 1459 aa11.62□□□□□ -0.55
RPS28P1-201ENST00000604589 FAM50AQ14320 339 aaKnown RBP11.61□□□□□ -0.55
RPS28P1-201ENST00000604589 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
RPS28P1-201ENST00000604589 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
RPS28P1-201ENST00000604589 ROCK1Q13464 1354 aa11.61□□□□□ -0.55
RPS28P1-201ENST00000604589 VWDEQ8N2E2 1590 aa11.6□□□□□ -0.55
RPS28P1-201ENST00000604589 IQSEC2Q5JU85 1478 aa11.6□□□□□ -0.55
RPS28P1-201ENST00000604589 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
RPS28P1-201ENST00000604589 ANKRD50Q9ULJ7 1429 aa11.6□□□□□ -0.55
RPS28P1-201ENST00000604589 CHIC2Q9UKJ5 165 aa11.58□□□□□ -0.56
RPS28P1-201ENST00000604589 UGGT1Q9NYU2 1555 aa11.58□□□□□ -0.56
RPS28P1-201ENST00000604589 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
RPS28P1-201ENST00000604589 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
RPS28P1-201ENST00000604589 MED14O60244 1454 aa11.56□□□□□ -0.56
RPS28P1-201ENST00000604589 RPRD2Q5VT52 1461 aaKnown RBP11.56□□□□□ -0.56
RPS28P1-201ENST00000604589 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
RPS28P1-201ENST00000604589 EFCAB6Q5THR3 1501 aa11.55□□□□□ -0.56
RPS28P1-201ENST00000604589 CEP152O94986 1710 aa11.55□□□□□ -0.56
RPS28P1-201ENST00000604589 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
RPS28P1-201ENST00000604589 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
RPS28P1-201ENST00000604589 NOS1P29475 1434 aa11.53□□□□□ -0.56
RPS28P1-201ENST00000604589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.53□□□□□ -0.56
RPS28P1-201ENST00000604589 ARHGAP23Q9P227 1491 aa11.52□□□□□ -0.56
RPS28P1-201ENST00000604589 SLIT1O75093 1534 aa11.52□□□□□ -0.57
RPS28P1-201ENST00000604589 UNC13BO14795 1591 aa11.52□□□□□ -0.57
RPS28P1-201ENST00000604589 POLR1AO95602 1720 aaPredicted RBP11.52□□□□□ -0.57
RPS28P1-201ENST00000604589 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.57
RPS28P1-201ENST00000604589 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
RPS28P1-201ENST00000604589 KDM5AP29375 1690 aaKnown RBP11.51□□□□□ -0.57
RPS28P1-201ENST00000604589 CPS1P31327 1500 aa11.5□□□□□ -0.57
RPS28P1-201ENST00000604589 ZNF335Q9H4Z2 1342 aaPredicted RBP11.5□□□□□ -0.57
RPS28P1-201ENST00000604589 TET3O43151 1660 aa11.49□□□□□ -0.57
RPS28P1-201ENST00000604589 UBR1Q8IWV7 1749 aa11.49□□□□□ -0.57
RPS28P1-201ENST00000604589 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
RPS28P1-201ENST00000604589 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
RPS28P1-201ENST00000604589 SYNMO15061 1565 aa11.47□□□□□ -0.57
RPS28P1-201ENST00000604589 EID1Q9Y6B2 187 aa11.47□□□□□ -0.57
RPS28P1-201ENST00000604589 IQGAP1P46940 1657 aa11.46□□□□□ -0.57
RPS28P1-201ENST00000604589 IQGAP3Q86VI3 1631 aa11.46□□□□□ -0.57
RPS28P1-201ENST00000604589 ADGRB3O60242 1522 aa11.46□□□□□ -0.57
RPS28P1-201ENST00000604589 IDI1Q13907 227 aa11.46□□□□□ -0.57
RPS28P1-201ENST00000604589 GCC2Q8IWJ2 1684 aa11.46□□□□□ -0.58
RPS28P1-201ENST00000604589 PIK3C2BO00750 1634 aa11.46□□□□□ -0.58
RPS28P1-201ENST00000604589 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
RPS28P1-201ENST00000604589 NUP155O75694 1391 aa11.44□□□□□ -0.58
RPS28P1-201ENST00000604589 TXNDC2Q86VQ3 553 aa11.44□□□□□ -0.58
RPS28P1-201ENST00000604589 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
RPS28P1-201ENST00000604589 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
RPS28P1-201ENST00000604589 NAIPQ13075 1403 aa11.43□□□□□ -0.58
RPS28P1-201ENST00000604589 LTKP29376 864 aa11.42□□□□□ -0.58
RPS28P1-201ENST00000604589 ITGAEP38570 1179 aa11.42□□□□□ -0.58
RPS28P1-201ENST00000604589 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
RPS28P1-201ENST00000604589 ZFYVE9O95405 1425 aa11.4□□□□□ -0.58
RPS28P1-201ENST00000604589 E9PCH4 1651 aa11.4□□□□□ -0.59
RPS28P1-201ENST00000604589 UBAP1LF5GYI3 381 aa11.39□□□□□ -0.59
RPS28P1-201ENST00000604589 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.39□□□□□ -0.59
RPS28P1-201ENST00000604589 PLEKHG1Q9ULL1 1385 aa11.39□□□□□ -0.59
RPS28P1-201ENST00000604589 CFAP65Q6ZU64 1925 aaKnown RBP11.39□□□□□ -0.59
RPS28P1-201ENST00000604589 ACIN1Q9UKV3 1341 aaKnown RBP11.38□□□□□ -0.59
RPS28P1-201ENST00000604589 TOM1O60784 492 aa11.38□□□□□ -0.59
RPS28P1-201ENST00000604589 LRRC7Q96NW7 1537 aa11.38□□□□□ -0.59
RPS28P1-201ENST00000604589 TMEM131LA2VDJ0 1609 aa11.38□□□□□ -0.59
RPS28P1-201ENST00000604589 RIMS2Q9UQ26 1411 aa11.37□□□□□ -0.59
RPS28P1-201ENST00000604589 NKTRP30414 1462 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms