RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 SOCS7O14512 581 aa31.84■■■□□ 2.69
GRAMD1A-214ENST00000603907 FAM50AQ14320 339 aaKnown RBP31.84■■■□□ 2.69
GRAMD1A-214ENST00000603907 INO80Q9ULG1 1556 aaPredicted RBP31.84■■■□□ 2.69
GRAMD1A-214ENST00000603907 PLXNC1O60486 1568 aa31.82■■■□□ 2.68
GRAMD1A-214ENST00000603907 A2MP01023 1474 aa31.82■■■□□ 2.68
GRAMD1A-214ENST00000603907 ZNF142P52746 1687 aaPredicted RBP31.82■■■□□ 2.68
GRAMD1A-214ENST00000603907 DNMT1P26358 1616 aaKnown RBP31.81■■■□□ 2.68
GRAMD1A-214ENST00000603907 MYO3AQ8NEV4 1616 aa31.8■■■□□ 2.68
GRAMD1A-214ENST00000603907 ABCC5O15440 1437 aa31.8■■■□□ 2.68
GRAMD1A-214ENST00000603907 SHANK2Q9UPX8 1470 aa31.79■■■□□ 2.68
GRAMD1A-214ENST00000603907 DAPK1P53355 1430 aa31.79■■■□□ 2.68
GRAMD1A-214ENST00000603907 MAST1Q9Y2H9 1570 aa31.78■■■□□ 2.68
GRAMD1A-214ENST00000603907 NCKAP5LQ9HCH0 1330 aa31.77■■■□□ 2.68
GRAMD1A-214ENST00000603907 PLA2R1Q13018 1463 aa31.77■■■□□ 2.68
GRAMD1A-214ENST00000603907 PKD2Q13563 968 aa31.75■■■□□ 2.67
GRAMD1A-214ENST00000603907 GGT6Q6P531 493 aa31.75■■■□□ 2.67
GRAMD1A-214ENST00000603907 CEP170BQ9Y4F5 1589 aaPredicted RBP31.75■■■□□ 2.67
GRAMD1A-214ENST00000603907 ADGBQ8N7X0 1667 aa31.75■■■□□ 2.67
GRAMD1A-214ENST00000603907 PTPRKQ15262 1439 aa31.74■■■□□ 2.67
GRAMD1A-214ENST00000603907 CROCC2H7BZ55 1655 aa31.73■■■□□ 2.67
GRAMD1A-214ENST00000603907 PPP6R1Q9UPN7 881 aa31.72■■■□□ 2.67
GRAMD1A-214ENST00000603907 ZNF335Q9H4Z2 1342 aaPredicted RBP31.72■■■□□ 2.67
GRAMD1A-214ENST00000603907 UBAP1LF5GYI3 381 aa31.66■■■□□ 2.66
GRAMD1A-214ENST00000603907 ADGRL2O95490 1459 aa31.62■■■□□ 2.65
GRAMD1A-214ENST00000603907 ANKRD30AQ9BXX3 1397 aa31.62■■■□□ 2.65
GRAMD1A-214ENST00000603907 A2ML1A8K2U0 1454 aa31.6■■■□□ 2.65
GRAMD1A-214ENST00000603907 DHX29Q7Z478 1369 aaKnown RBP31.59■■■□□ 2.65
GRAMD1A-214ENST00000603907 ROCK1Q13464 1354 aa31.57■■■□□ 2.64
GRAMD1A-214ENST00000603907 CHIC2Q9UKJ5 165 aa31.57■■■□□ 2.64
GRAMD1A-214ENST00000603907 KIF15Q9NS87 1388 aa31.55■■■□□ 2.64
GRAMD1A-214ENST00000603907 DUOX2Q9NRD8 1548 aa31.54■■■□□ 2.64
GRAMD1A-214ENST00000603907 POLR1AO95602 1720 aaPredicted RBP31.53■■■□□ 2.64
GRAMD1A-214ENST00000603907 ITGAEP38570 1179 aa31.53■■■□□ 2.64
GRAMD1A-214ENST00000603907 RRP7BPQ9NSQ0 103 aa31.5■■■□□ 2.63
GRAMD1A-214ENST00000603907 FAM135AQ9P2D6 1515 aa31.49■■■□□ 2.63
GRAMD1A-214ENST00000603907 TNRQ92752 1358 aa31.48■■■□□ 2.63
GRAMD1A-214ENST00000603907 KDM5DQ9BY66 1539 aa31.48■■■□□ 2.63
GRAMD1A-214ENST00000603907 ERBINQ96RT1 1412 aa31.48■■■□□ 2.63
GRAMD1A-214ENST00000603907 KIF3BO15066 747 aa31.47■■■□□ 2.63
GRAMD1A-214ENST00000603907 PZPP20742 1482 aa31.45■■■□□ 2.62
GRAMD1A-214ENST00000603907 CPS1P31327 1500 aa31.44■■■□□ 2.62
GRAMD1A-214ENST00000603907 EIF2AK4Q9P2K8 1649 aaKnown RBP31.44■■■□□ 2.62
GRAMD1A-214ENST00000603907 NEURL4Q96JN8 1562 aa31.43■■■□□ 2.62
GRAMD1A-214ENST00000603907 FBXO31Q5XUX0 539 aaPredicted RBP31.42■■■□□ 2.62
GRAMD1A-214ENST00000603907 SCAF1Q9H7N4 1312 aaKnown RBP31.41■■■□□ 2.62
GRAMD1A-214ENST00000603907 WASHC2CQ9Y4E1 1318 aa31.41■■■□□ 2.62
GRAMD1A-214ENST00000603907 TOM1O60784 492 aa31.39■■■□□ 2.62
GRAMD1A-214ENST00000603907 ANKRD50Q9ULJ7 1429 aa31.39■■■□□ 2.62
GRAMD1A-214ENST00000603907 ANKLE2Q86XL3 938 aa31.37■■■□□ 2.61
GRAMD1A-214ENST00000603907 THEMISQ8N1K5 641 aaPredicted RBP31.36■■■□□ 2.61
GRAMD1A-214ENST00000603907 NLRP1Q9C000 1473 aa31.35■■■□□ 2.61
GRAMD1A-214ENST00000603907 PIP4K2BP78356 416 aa31.35■■■□□ 2.61
GRAMD1A-214ENST00000603907 HFM1A2PYH4 1435 aa31.33■■■□□ 2.61
GRAMD1A-214ENST00000603907 RNF17Q9BXT8 1623 aaKnown RBP31.32■■■□□ 2.6
GRAMD1A-214ENST00000603907 UGGT1Q9NYU2 1555 aa31.32■■■□□ 2.6
GRAMD1A-214ENST00000603907 HSPA1LP34931 641 aa31.32■■■□□ 2.6
GRAMD1A-214ENST00000603907 NAIPQ13075 1403 aa31.31■■■□□ 2.6
GRAMD1A-214ENST00000603907 DEPDC5O75140 1603 aa31.3■■■□□ 2.6
GRAMD1A-214ENST00000603907 MED1Q15648 1581 aaPredicted RBP31.29■■■□□ 2.6
GRAMD1A-214ENST00000603907 VWDEQ8N2E2 1590 aa31.28■■■□□ 2.6
GRAMD1A-214ENST00000603907 GCC2Q8IWJ2 1684 aa31.28■■■□□ 2.6
GRAMD1A-214ENST00000603907 MED14O60244 1454 aa31.27■■■□□ 2.6
GRAMD1A-214ENST00000603907 NPHP4O75161 1426 aaPredicted RBP31.27■■■□□ 2.6
GRAMD1A-214ENST00000603907 ZC3H13Q5T200 1668 aaKnown RBP31.24■■■□□ 2.59
GRAMD1A-214ENST00000603907 PRDM15P57071 1507 aaPredicted RBP31.24■■■□□ 2.59
GRAMD1A-214ENST00000603907 IQGAP1P46940 1657 aa31.23■■■□□ 2.59
GRAMD1A-214ENST00000603907 TRIM26Q12899 539 aaPredicted RBP31.22■■■□□ 2.59
GRAMD1A-214ENST00000603907 MROH1Q8NDA8 1641 aa31.22■■■□□ 2.59
GRAMD1A-214ENST00000603907 KANK1Q14678 1352 aa31.2■■■□□ 2.59
GRAMD1A-214ENST00000603907 ABCC3O15438 1527 aa31.18■■■□□ 2.58
GRAMD1A-214ENST00000603907 ACIN1Q9UKV3 1341 aaKnown RBP31.17■■■□□ 2.58
GRAMD1A-214ENST00000603907 UNC13BO14795 1591 aa31.17■■■□□ 2.58
GRAMD1A-214ENST00000603907 SETD5Q9C0A6 1442 aa31.15■■■□□ 2.58
GRAMD1A-214ENST00000603907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.13■■■□□ 2.574e-12■■□□□ 12.3
GRAMD1A-214ENST00000603907 ERVK-7P63135 1459 aa31.12■■■□□ 2.57
GRAMD1A-214ENST00000603907 SYNMO15061 1565 aa31.12■■■□□ 2.57
GRAMD1A-214ENST00000603907 ALKQ9UM73 1620 aa31.12■■■□□ 2.57
GRAMD1A-214ENST00000603907 LMTK2Q8IWU2 1503 aa31.1■■■□□ 2.57
GRAMD1A-214ENST00000603907 PHF23Q9BUL5 403 aaPredicted RBP31.1■■■□□ 2.57
GRAMD1A-214ENST00000603907 STRCP1A6NGW2 1772 aa31.1■■■□□ 2.57
GRAMD1A-214ENST00000603907 LRRC7Q96NW7 1537 aa31.08■■■□□ 2.57
GRAMD1A-214ENST00000603907 CEP152O94986 1710 aa31.07■■■□□ 2.56
GRAMD1A-214ENST00000603907 NUP155O75694 1391 aa31.06■■■□□ 2.56
GRAMD1A-214ENST00000603907 CFAP65Q6ZU64 1925 aaKnown RBP31.06■■■□□ 2.56
GRAMD1A-214ENST00000603907 UBR1Q8IWV7 1749 aa31.06■■■□□ 2.56
GRAMD1A-214ENST00000603907 HRCP23327 699 aa31.04■■■□□ 2.56
GRAMD1A-214ENST00000603907 IQGAP3Q86VI3 1631 aa31.03■■■□□ 2.56
GRAMD1A-214ENST00000603907 ARHGAP31Q2M1Z3 1444 aa31.03■■■□□ 2.56
GRAMD1A-214ENST00000603907 RAB3GAP2Q9H2M9 1393 aa31.01■■■□□ 2.55
GRAMD1A-214ENST00000603907 SCAF11Q99590 1463 aaKnown RBP31.01■■■□□ 2.55
GRAMD1A-214ENST00000603907 TET3O43151 1660 aa30.97■■■□□ 2.55
GRAMD1A-214ENST00000603907 TRIM52Q96A61 297 aa30.97■■■□□ 2.55
GRAMD1A-214ENST00000603907 SENP3Q9H4L4 574 aaPredicted RBP30.97■■■□□ 2.55
GRAMD1A-214ENST00000603907 EFCAB6Q5THR3 1501 aa30.96■■■□□ 2.55
GRAMD1A-214ENST00000603907 SLIT1O75093 1534 aa30.94■■■□□ 2.54
GRAMD1A-214ENST00000603907 RPRD2Q5VT52 1461 aaKnown RBP30.94■■■□□ 2.54
GRAMD1A-214ENST00000603907 ARHGAP23Q9P227 1491 aa30.94■■■□□ 2.54
GRAMD1A-214ENST00000603907 TXNDC2Q86VQ3 553 aa30.92■■■□□ 2.54
GRAMD1A-214ENST00000603907 EID1Q9Y6B2 187 aa30.91■■■□□ 2.54
GRAMD1A-214ENST00000603907 LTKP29376 864 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms