RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 DUOX2Q9NRD8 1548 aa18.59■□□□□ 0.57
HERPUD2-207ENST00000603731 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.57
HERPUD2-207ENST00000603731 POGZQ7Z3K3 1410 aa18.57■□□□□ 0.56
HERPUD2-207ENST00000603731 STRCQ7RTU9 1775 aa18.55■□□□□ 0.56
HERPUD2-207ENST00000603731 SIGLEC1Q9BZZ2 1709 aa18.55■□□□□ 0.56
HERPUD2-207ENST00000603731 KDM5CP41229 1560 aa18.55■□□□□ 0.56
HERPUD2-207ENST00000603731 KIDINS220Q9ULH0 1771 aa18.54■□□□□ 0.56
HERPUD2-207ENST00000603731 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
HERPUD2-207ENST00000603731 ERBINQ96RT1 1412 aa18.52■□□□□ 0.56
HERPUD2-207ENST00000603731 YEATS2Q9ULM3 1422 aa18.52■□□□□ 0.56
HERPUD2-207ENST00000603731 PREX1Q8TCU6 1659 aa18.52■□□□□ 0.56
HERPUD2-207ENST00000603731 FER1L4A9Z1Z3 1794 aa18.52■□□□□ 0.55
HERPUD2-207ENST00000603731 MPHOSPH9Q99550 1183 aa18.51■□□□□ 0.55
HERPUD2-207ENST00000603731 MLH3Q9UHC1 1453 aa18.51■□□□□ 0.55
HERPUD2-207ENST00000603731 UNC13BO14795 1591 aa18.48■□□□□ 0.55
HERPUD2-207ENST00000603731 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
HERPUD2-207ENST00000603731 NUP155O75694 1391 aa18.47■□□□□ 0.55
HERPUD2-207ENST00000603731 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
HERPUD2-207ENST00000603731 KDM5DQ9BY66 1539 aa18.47■□□□□ 0.55
HERPUD2-207ENST00000603731 PZPP20742 1482 aa18.46■□□□□ 0.54
HERPUD2-207ENST00000603731 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
HERPUD2-207ENST00000603731 MLECQ14165 292 aa18.45■□□□□ 0.54
HERPUD2-207ENST00000603731 DHX29Q7Z478 1369 aaKnown RBP18.44■□□□□ 0.54
HERPUD2-207ENST00000603731 ABCA6Q8N139 1617 aa18.44■□□□□ 0.54
HERPUD2-207ENST00000603731 LTBP4Q8N2S1 1624 aa18.44■□□□□ 0.54
HERPUD2-207ENST00000603731 A2MP01023 1474 aa18.44■□□□□ 0.54
HERPUD2-207ENST00000603731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
HERPUD2-207ENST00000603731 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
HERPUD2-207ENST00000603731 NEUROD1Q13562 356 aa18.41■□□□□ 0.54
HERPUD2-207ENST00000603731 IQGAP3Q86VI3 1631 aa18.41■□□□□ 0.54
HERPUD2-207ENST00000603731 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
HERPUD2-207ENST00000603731 DIP2CQ9Y2E4 1556 aa18.4■□□□□ 0.54
HERPUD2-207ENST00000603731 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.54
HERPUD2-207ENST00000603731 FAM135AQ9P2D6 1515 aa18.39■□□□□ 0.54
HERPUD2-207ENST00000603731 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
HERPUD2-207ENST00000603731 KIF3BO15066 747 aa18.39■□□□□ 0.53
HERPUD2-207ENST00000603731 SIN3AQ96ST3 1273 aa18.39■□□□□ 0.53
HERPUD2-207ENST00000603731 PTPRTO14522 1441 aa18.39■□□□□ 0.53
HERPUD2-207ENST00000603731 CEBPAP49715 358 aaPredicted RBP18.38■□□□□ 0.53
HERPUD2-207ENST00000603731 PKD2Q13563 968 aa18.38■□□□□ 0.53
HERPUD2-207ENST00000603731 KANK1Q14678 1352 aa18.38■□□□□ 0.53
HERPUD2-207ENST00000603731 FOXD1Q16676 465 aa18.37■□□□□ 0.53
HERPUD2-207ENST00000603731 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
HERPUD2-207ENST00000603731 RNF17Q9BXT8 1623 aaKnown RBP18.34■□□□□ 0.53
HERPUD2-207ENST00000603731 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
HERPUD2-207ENST00000603731 ATP10AO60312 1499 aa18.33■□□□□ 0.52
HERPUD2-207ENST00000603731 ANKRD30BQ9BXX2 1392 aa18.32■□□□□ 0.52
HERPUD2-207ENST00000603731 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
HERPUD2-207ENST00000603731 TONSLQ96HA7 1378 aa18.31■□□□□ 0.52
HERPUD2-207ENST00000603731 TET3O43151 1660 aa18.3■□□□□ 0.52
HERPUD2-207ENST00000603731 MROH1Q8NDA8 1641 aa18.3■□□□□ 0.52
HERPUD2-207ENST00000603731 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
HERPUD2-207ENST00000603731 VWDEQ8N2E2 1590 aa18.29■□□□□ 0.52
HERPUD2-207ENST00000603731 CEP152O94986 1710 aa18.29■□□□□ 0.52
HERPUD2-207ENST00000603731 SETD1BQ9UPS6 1966 aaKnown RBP18.28■□□□□ 0.52
HERPUD2-207ENST00000603731 GGT6Q6P531 493 aa18.28■□□□□ 0.52
HERPUD2-207ENST00000603731 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
HERPUD2-207ENST00000603731 UBAP1LF5GYI3 381 aa18.27■□□□□ 0.52
HERPUD2-207ENST00000603731 E9PCH4 1651 aa18.26■□□□□ 0.51
HERPUD2-207ENST00000603731 RPRD2Q5VT52 1461 aaKnown RBP18.25■□□□□ 0.51
HERPUD2-207ENST00000603731 AGLP35573 1532 aa18.23■□□□□ 0.51
HERPUD2-207ENST00000603731 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
HERPUD2-207ENST00000603731 SPHKAPQ2M3C7 1700 aa18.22■□□□□ 0.51
HERPUD2-207ENST00000603731 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
HERPUD2-207ENST00000603731 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.51
HERPUD2-207ENST00000603731 C3P01024 1663 aa18.2■□□□□ 0.5
HERPUD2-207ENST00000603731 EFCAB6Q5THR3 1501 aa18.19■□□□□ 0.5
HERPUD2-207ENST00000603731 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
HERPUD2-207ENST00000603731 CAMSAP1Q5T5Y3 1602 aa18.19■□□□□ 0.5
HERPUD2-207ENST00000603731 ABCC3O15438 1527 aa18.18■□□□□ 0.5
HERPUD2-207ENST00000603731 CFAP65Q6ZU64 1925 aaKnown RBP18.18■□□□□ 0.5
HERPUD2-207ENST00000603731 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
HERPUD2-207ENST00000603731 ZNF335Q9H4Z2 1342 aaPredicted RBP18.17■□□□□ 0.5
HERPUD2-207ENST00000603731 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
HERPUD2-207ENST00000603731 PLA2R1Q13018 1463 aa18.14■□□□□ 0.5
HERPUD2-207ENST00000603731 TRPM2O94759 1503 aa18.14■□□□□ 0.49
HERPUD2-207ENST00000603731 HSPA1LP34931 641 aa18.14■□□□□ 0.49
HERPUD2-207ENST00000603731 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
HERPUD2-207ENST00000603731 CLTCQ00610 1675 aaKnown RBP18.11■□□□□ 0.49
HERPUD2-207ENST00000603731 KIF1BO60333 1816 aa18.1■□□□□ 0.49
HERPUD2-207ENST00000603731 NPATQ14207 1427 aa18.1■□□□□ 0.49
HERPUD2-207ENST00000603731 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
HERPUD2-207ENST00000603731 CLTCL1P53675 1640 aa18.09■□□□□ 0.49
HERPUD2-207ENST00000603731 ARHGAP31Q2M1Z3 1444 aa18.08■□□□□ 0.49
HERPUD2-207ENST00000603731 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
HERPUD2-207ENST00000603731 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
HERPUD2-207ENST00000603731 NCKAP5LQ9HCH0 1330 aa18.07■□□□□ 0.48
HERPUD2-207ENST00000603731 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
HERPUD2-207ENST00000603731 ZNF316A6NFI3 1004 aaPredicted RBP18.05■□□□□ 0.48
HERPUD2-207ENST00000603731 RGL3Q3MIN7 710 aa18.05■□□□□ 0.48
HERPUD2-207ENST00000603731 PIP4K2BP78356 416 aa18.04■□□□□ 0.48
HERPUD2-207ENST00000603731 NOS1P29475 1434 aa18.02■□□□□ 0.48
HERPUD2-207ENST00000603731 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.48
HERPUD2-207ENST00000603731 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.48
HERPUD2-207ENST00000603731 UGGT1Q9NYU2 1555 aa18.01■□□□□ 0.47
HERPUD2-207ENST00000603731 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
HERPUD2-207ENST00000603731 NEURL4Q96JN8 1562 aa18■□□□□ 0.47
HERPUD2-207ENST00000603731 SPATA31E1Q6ZUB1 1445 aa17.99■□□□□ 0.47
HERPUD2-207ENST00000603731 SYNMO15061 1565 aa17.99■□□□□ 0.47
HERPUD2-207ENST00000603731 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms