RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 TSPY4P0CV99 314 aa32.73■■■□□ 2.83
PPFIA3-212ENST00000602897 TSPY10P0CW01 314 aa32.73■■■□□ 2.83
PPFIA3-212ENST00000602897 ESF1Q9H501 851 aaKnown RBP32.69■■■□□ 2.82
PPFIA3-212ENST00000602897 NCOA1Q15788 1441 aa32.69■■■□□ 2.82
PPFIA3-212ENST00000602897 PLXNC1O60486 1568 aa32.69■■■□□ 2.82
PPFIA3-212ENST00000602897 ANKRD30AQ9BXX3 1397 aa32.68■■■□□ 2.82
PPFIA3-212ENST00000602897 CEBPAP49715 358 aaPredicted RBP32.63■■■□□ 2.81
PPFIA3-212ENST00000602897 DHX29Q7Z478 1369 aaKnown RBP32.63■■■□□ 2.81
PPFIA3-212ENST00000602897 GGT6Q6P531 493 aa32.59■■■□□ 2.81
PPFIA3-212ENST00000602897 MAST1Q9Y2H9 1570 aa32.57■■■□□ 2.8
PPFIA3-212ENST00000602897 CNTLNQ9NXG0 1405 aa32.57■■■□□ 2.8
PPFIA3-212ENST00000602897 KIF3BO15066 747 aa32.53■■■□□ 2.8
PPFIA3-212ENST00000602897 LMTK3Q96Q04 1460 aa32.52■■■□□ 2.8
PPFIA3-212ENST00000602897 TIMELESSQ9UNS1 1208 aa32.5■■■□□ 2.79
PPFIA3-212ENST00000602897 PPP6R1Q9UPN7 881 aa32.49■■■□□ 2.79
PPFIA3-212ENST00000602897 TRIM52Q96A61 297 aa32.48■■■□□ 2.79
PPFIA3-212ENST00000602897 C3P01024 1663 aa32.47■■■□□ 2.79
PPFIA3-212ENST00000602897 ANKRD50Q9ULJ7 1429 aa32.47■■■□□ 2.79
PPFIA3-212ENST00000602897 ZMYM3Q14202 1370 aa32.46■■■□□ 2.79
PPFIA3-212ENST00000602897 KIF15Q9NS87 1388 aa32.43■■■□□ 2.78
PPFIA3-212ENST00000602897 MROH2AA6NES4 1674 aa32.42■■■□□ 2.78
PPFIA3-212ENST00000602897 CLTCQ00610 1675 aaKnown RBP32.42■■■□□ 2.78
PPFIA3-212ENST00000602897 HSPA2P54652 639 aa32.41■■■□□ 2.78
PPFIA3-212ENST00000602897 MPHOSPH9Q99550 1183 aa32.4■■■□□ 2.78
PPFIA3-212ENST00000602897 DUOX2Q9NRD8 1548 aa32.37■■■□□ 2.77
PPFIA3-212ENST00000602897 PREX1Q8TCU6 1659 aa32.37■■■□□ 2.77
PPFIA3-212ENST00000602897 UHRF1BP1Q6BDS2 1440 aa32.36■■■□□ 2.77
PPFIA3-212ENST00000602897 WASHC2CQ9Y4E1 1318 aa32.35■■■□□ 2.77
PPFIA3-212ENST00000602897 SETD1BQ9UPS6 1966 aaKnown RBP32.34■■■□□ 2.77
PPFIA3-212ENST00000602897 NPATQ14207 1427 aa32.34■■■□□ 2.77
PPFIA3-212ENST00000602897 KDM5DQ9BY66 1539 aa32.31■■■□□ 2.76
PPFIA3-212ENST00000602897 EIF2AK4Q9P2K8 1649 aaKnown RBP32.31■■■□□ 2.76
PPFIA3-212ENST00000602897 SIN3AQ96ST3 1273 aa32.3■■■□□ 2.76
PPFIA3-212ENST00000602897 FAM135AQ9P2D6 1515 aa32.3■■■□□ 2.76
PPFIA3-212ENST00000602897 RNF17Q9BXT8 1623 aaKnown RBP32.28■■■□□ 2.76
PPFIA3-212ENST00000602897 ERBINQ96RT1 1412 aa32.28■■■□□ 2.76
PPFIA3-212ENST00000602897 PZPP20742 1482 aa32.27■■■□□ 2.76
PPFIA3-212ENST00000602897 SLC4A1APQ9BWU0 796 aaKnown RBP32.26■■■□□ 2.76
PPFIA3-212ENST00000602897 NEUROD1Q13562 356 aa32.25■■■□□ 2.75
PPFIA3-212ENST00000602897 MROH1Q8NDA8 1641 aa32.2■■■□□ 2.74
PPFIA3-212ENST00000602897 NUP155O75694 1391 aa32.19■■■□□ 2.74
PPFIA3-212ENST00000602897 FBXO31Q5XUX0 539 aaPredicted RBP32.19■■■□□ 2.74
PPFIA3-212ENST00000602897 ANKRD30BQ9BXX2 1392 aa32.19■■■□□ 2.74
PPFIA3-212ENST00000602897 ABCC3O15438 1527 aa32.18■■■□□ 2.74
PPFIA3-212ENST00000602897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.17■■■□□ 2.74
PPFIA3-212ENST00000602897 TONSLQ96HA7 1378 aa32.16■■■□□ 2.74
PPFIA3-212ENST00000602897 UNC13BO14795 1591 aa32.15■■■□□ 2.74
PPFIA3-212ENST00000602897 ZNF316A6NFI3 1004 aaPredicted RBP32.15■■■□□ 2.74
PPFIA3-212ENST00000602897 ZC3H13Q5T200 1668 aaKnown RBP32.14■■■□□ 2.74
PPFIA3-212ENST00000602897 PRDM15P57071 1507 aaPredicted RBP32.13■■■□□ 2.73
PPFIA3-212ENST00000602897 TNRQ92752 1358 aa32.12■■■□□ 2.73
PPFIA3-212ENST00000602897 MYO3AQ8NEV4 1616 aa32.12■■■□□ 2.73
PPFIA3-212ENST00000602897 PPP1R15AO75807 674 aaPredicted RBP32.11■■■□□ 2.73
PPFIA3-212ENST00000602897 KANK1Q14678 1352 aa32.1■■■□□ 2.73
PPFIA3-212ENST00000602897 DEPDC5O75140 1603 aa32.09■■■□□ 2.73
PPFIA3-212ENST00000602897 PKD2Q13563 968 aa32.08■■■□□ 2.73
PPFIA3-212ENST00000602897 CEP152O94986 1710 aa32.07■■■□□ 2.72
PPFIA3-212ENST00000602897 CEP170BQ9Y4F5 1589 aaPredicted RBP32.07■■■□□ 2.72
PPFIA3-212ENST00000602897 RPRD2Q5VT52 1461 aaKnown RBP32.05■■■□□ 2.72
PPFIA3-212ENST00000602897 CAMSAP1Q5T5Y3 1602 aa32.04■■■□□ 2.72
PPFIA3-212ENST00000602897 ZNF142P52746 1687 aaPredicted RBP32.04■■■□□ 2.72
PPFIA3-212ENST00000602897 FOXD1Q16676 465 aa32.04■■■□□ 2.72
PPFIA3-212ENST00000602897 DMRT2Q9Y5R5 561 aa32.04■■■□□ 2.72
PPFIA3-212ENST00000602897 A2ML1A8K2U0 1454 aa32.03■■■□□ 2.72
PPFIA3-212ENST00000602897 IQGAP3Q86VI3 1631 aa32.02■■■□□ 2.72
PPFIA3-212ENST00000602897 STRCQ7RTU9 1775 aa32.02■■■□□ 2.72
PPFIA3-212ENST00000602897 ERVK-7P63135 1459 aa31.99■■■□□ 2.71
PPFIA3-212ENST00000602897 ARHGAP31Q2M1Z3 1444 aa31.99■■■□□ 2.71
PPFIA3-212ENST00000602897 SPATA31D1Q6ZQQ2 1576 aa31.98■■■□□ 2.71
PPFIA3-212ENST00000602897 VWDEQ8N2E2 1590 aa31.97■■■□□ 2.71
PPFIA3-212ENST00000602897 NLRP1Q9C000 1473 aa31.96■■■□□ 2.71
PPFIA3-212ENST00000602897 LMTK2Q8IWU2 1503 aa31.95■■■□□ 2.71
PPFIA3-212ENST00000602897 PLA2R1Q13018 1463 aa31.93■■■□□ 2.7
PPFIA3-212ENST00000602897 NCKAP5LQ9HCH0 1330 aa31.92■■■□□ 2.7
PPFIA3-212ENST00000602897 PTPRTO14522 1441 aa31.91■■■□□ 2.7
PPFIA3-212ENST00000602897 CFAP65Q6ZU64 1925 aaKnown RBP31.89■■■□□ 2.7
PPFIA3-212ENST00000602897 THEMISQ8N1K5 641 aaPredicted RBP31.89■■■□□ 2.7
PPFIA3-212ENST00000602897 UGGT1Q9NYU2 1555 aa31.87■■■□□ 2.69
PPFIA3-212ENST00000602897 EFCAB6Q5THR3 1501 aa31.85■■■□□ 2.69
PPFIA3-212ENST00000602897 L3MBTL2Q969R5 705 aa31.85■■■□□ 2.69
PPFIA3-212ENST00000602897 DIEXFQ68CQ4 756 aaKnown RBP31.78■■■□□ 2.68
PPFIA3-212ENST00000602897 ANKLE2Q86XL3 938 aa31.78■■■□□ 2.68
PPFIA3-212ENST00000602897 TET3O43151 1660 aa31.77■■■□□ 2.68
PPFIA3-212ENST00000602897 NOS1P29475 1434 aa31.76■■■□□ 2.67
PPFIA3-212ENST00000602897 ILDR1Q86SU0 546 aaPredicted RBP31.74■■■□□ 2.67
PPFIA3-212ENST00000602897 CCDC144AA2RUR9 1427 aa31.73■■■□□ 2.67
PPFIA3-212ENST00000602897 IDI1Q13907 227 aa31.73■■■□□ 2.67
PPFIA3-212ENST00000602897 CERKQ8TCT0 537 aa31.73■■■□□ 2.67
PPFIA3-212ENST00000602897 STAG3Q9UJ98 1225 aa31.72■■■□□ 2.67
PPFIA3-212ENST00000602897 SYNMO15061 1565 aa31.71■■■□□ 2.67
PPFIA3-212ENST00000602897 UBR1Q8IWV7 1749 aa31.7■■■□□ 2.67
PPFIA3-212ENST00000602897 SLC52A1Q9NWF4 448 aa31.69■■■□□ 2.66
PPFIA3-212ENST00000602897 POLR1AO95602 1720 aaPredicted RBP31.69■■■□□ 2.66
PPFIA3-212ENST00000602897 PIK3C2BO00750 1634 aa31.69■■■□□ 2.66
PPFIA3-212ENST00000602897 NEURL4Q96JN8 1562 aa31.68■■■□□ 2.66
PPFIA3-212ENST00000602897 E9PCH4 1651 aa31.68■■■□□ 2.66
PPFIA3-212ENST00000602897 FBXO41Q8TF61 875 aa31.65■■■□□ 2.66
PPFIA3-212ENST00000602897 ZNF335Q9H4Z2 1342 aaPredicted RBP31.64■■■□□ 2.66
PPFIA3-212ENST00000602897 NPHP4O75161 1426 aaPredicted RBP31.63■■■□□ 2.65
PPFIA3-212ENST00000602897 MED14O60244 1454 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms