RNA–Protein interactions for RNA: ENST00000602878.5

LINC00472-206, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-206ENST00000602878 KDM5DQ9BY66 1539 aa18.07■□□□□ 0.48
LINC00472-206ENST00000602878 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
LINC00472-206ENST00000602878 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
LINC00472-206ENST00000602878 EIF2AK4Q9P2K8 1649 aaKnown RBP18.06■□□□□ 0.48
LINC00472-206ENST00000602878 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
LINC00472-206ENST00000602878 RNF17Q9BXT8 1623 aaKnown RBP18.05■□□□□ 0.48
LINC00472-206ENST00000602878 KIF15Q9NS87 1388 aa18.05■□□□□ 0.48
LINC00472-206ENST00000602878 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
LINC00472-206ENST00000602878 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
LINC00472-206ENST00000602878 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
LINC00472-206ENST00000602878 MYO3AQ8NEV4 1616 aa18.03■□□□□ 0.48
LINC00472-206ENST00000602878 PPARGC1BQ86YN6 1023 aaKnown RBP18.03■□□□□ 0.48
LINC00472-206ENST00000602878 FBXO31Q5XUX0 539 aaPredicted RBP18.02■□□□□ 0.48
LINC00472-206ENST00000602878 CFAP65Q6ZU64 1925 aaKnown RBP18.01■□□□□ 0.47
LINC00472-206ENST00000602878 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
LINC00472-206ENST00000602878 PZPP20742 1482 aa18.01■□□□□ 0.47
LINC00472-206ENST00000602878 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
LINC00472-206ENST00000602878 ILDR1Q86SU0 546 aaPredicted RBP18■□□□□ 0.47
LINC00472-206ENST00000602878 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
LINC00472-206ENST00000602878 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
LINC00472-206ENST00000602878 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
LINC00472-206ENST00000602878 ERBINQ96RT1 1412 aa17.99■□□□□ 0.47
LINC00472-206ENST00000602878 ABCC3O15438 1527 aa17.99■□□□□ 0.47
LINC00472-206ENST00000602878 CAMSAP1Q5T5Y3 1602 aa17.99■□□□□ 0.47
LINC00472-206ENST00000602878 CEP152O94986 1710 aa17.99■□□□□ 0.47
LINC00472-206ENST00000602878 CEP170BQ9Y4F5 1589 aaPredicted RBP17.99■□□□□ 0.47
LINC00472-206ENST00000602878 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
LINC00472-206ENST00000602878 TNRQ92752 1358 aa17.97■□□□□ 0.47
LINC00472-206ENST00000602878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
LINC00472-206ENST00000602878 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
LINC00472-206ENST00000602878 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
LINC00472-206ENST00000602878 PRDM15P57071 1507 aaPredicted RBP17.94■□□□□ 0.46
LINC00472-206ENST00000602878 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
LINC00472-206ENST00000602878 PTPRTO14522 1441 aa17.93■□□□□ 0.46
LINC00472-206ENST00000602878 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
LINC00472-206ENST00000602878 KANK1Q14678 1352 aa17.91■□□□□ 0.46
LINC00472-206ENST00000602878 PLA2R1Q13018 1463 aa17.9■□□□□ 0.46
LINC00472-206ENST00000602878 SPATA31D1Q6ZQQ2 1576 aa17.9■□□□□ 0.46
LINC00472-206ENST00000602878 PKD2Q13563 968 aa17.89■□□□□ 0.45
LINC00472-206ENST00000602878 FBXO41Q8TF61 875 aa17.89■□□□□ 0.45
LINC00472-206ENST00000602878 ERVK-7P63135 1459 aa17.88■□□□□ 0.45
LINC00472-206ENST00000602878 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
LINC00472-206ENST00000602878 ITGAEP38570 1179 aa17.88■□□□□ 0.45
LINC00472-206ENST00000602878 CERKQ8TCT0 537 aa17.88■□□□□ 0.45
LINC00472-206ENST00000602878 ANKRD50Q9ULJ7 1429 aa17.88■□□□□ 0.45
LINC00472-206ENST00000602878 THEMISQ8N1K5 641 aaPredicted RBP17.86■□□□□ 0.45
LINC00472-206ENST00000602878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC00472-206ENST00000602878 ARHGAP31Q2M1Z3 1444 aa17.86■□□□□ 0.45
LINC00472-206ENST00000602878 UGGT1Q9NYU2 1555 aa17.86■□□□□ 0.45
LINC00472-206ENST00000602878 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
LINC00472-206ENST00000602878 POLR1AO95602 1720 aaPredicted RBP17.84■□□□□ 0.45
LINC00472-206ENST00000602878 LMTK2Q8IWU2 1503 aa17.83■□□□□ 0.45
LINC00472-206ENST00000602878 ROCK1Q13464 1354 aa17.83■□□□□ 0.45
LINC00472-206ENST00000602878 ANKLE2Q86XL3 938 aa17.81■□□□□ 0.44
LINC00472-206ENST00000602878 UBR1Q8IWV7 1749 aa17.8■□□□□ 0.44
LINC00472-206ENST00000602878 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
LINC00472-206ENST00000602878 LTBP4Q8N2S1 1624 aa17.79■□□□□ 0.44
LINC00472-206ENST00000602878 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
LINC00472-206ENST00000602878 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
LINC00472-206ENST00000602878 ZNF335Q9H4Z2 1342 aaPredicted RBP17.77■□□□□ 0.44
LINC00472-206ENST00000602878 UNC13BO14795 1591 aa17.77■□□□□ 0.44
LINC00472-206ENST00000602878 TET3O43151 1660 aa17.75■□□□□ 0.43
LINC00472-206ENST00000602878 PIK3C2BO00750 1634 aa17.75■□□□□ 0.43
LINC00472-206ENST00000602878 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
LINC00472-206ENST00000602878 SYNMO15061 1565 aa17.74■□□□□ 0.43
LINC00472-206ENST00000602878 GCC2Q8IWJ2 1684 aa17.74■□□□□ 0.43
LINC00472-206ENST00000602878 NOS1P29475 1434 aa17.73■□□□□ 0.43
LINC00472-206ENST00000602878 IDI1Q13907 227 aa17.73■□□□□ 0.43
LINC00472-206ENST00000602878 MED14O60244 1454 aa17.73■□□□□ 0.43
LINC00472-206ENST00000602878 NPHP4O75161 1426 aaPredicted RBP17.72■□□□□ 0.43
LINC00472-206ENST00000602878 RPRD2Q5VT52 1461 aaKnown RBP17.72■□□□□ 0.43
LINC00472-206ENST00000602878 IQGAP1P46940 1657 aa17.71■□□□□ 0.43
LINC00472-206ENST00000602878 IQGAP3Q86VI3 1631 aa17.71■□□□□ 0.43
LINC00472-206ENST00000602878 NUP155O75694 1391 aa17.7■□□□□ 0.42
LINC00472-206ENST00000602878 SLIT1O75093 1534 aa17.69■□□□□ 0.42
LINC00472-206ENST00000602878 E9PCH4 1651 aa17.69■□□□□ 0.42
LINC00472-206ENST00000602878 KDM5AP29375 1690 aaKnown RBP17.69■□□□□ 0.42
LINC00472-206ENST00000602878 TXNDC2Q86VQ3 553 aa17.69■□□□□ 0.42
LINC00472-206ENST00000602878 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
LINC00472-206ENST00000602878 ARHGAP23Q9P227 1491 aa17.69■□□□□ 0.42
LINC00472-206ENST00000602878 LTKP29376 864 aa17.68■□□□□ 0.42
LINC00472-206ENST00000602878 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
LINC00472-206ENST00000602878 SCAF11Q99590 1463 aaKnown RBP17.68■□□□□ 0.42
LINC00472-206ENST00000602878 EID1Q9Y6B2 187 aa17.67■□□□□ 0.42
LINC00472-206ENST00000602878 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
LINC00472-206ENST00000602878 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
LINC00472-206ENST00000602878 NAIPQ13075 1403 aa17.65■□□□□ 0.42
LINC00472-206ENST00000602878 ADGRB3O60242 1522 aa17.65■□□□□ 0.42
LINC00472-206ENST00000602878 CPS1P31327 1500 aa17.62■□□□□ 0.41
LINC00472-206ENST00000602878 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
LINC00472-206ENST00000602878 CHGAP10645 457 aaKnown RBP17.6■□□□□ 0.41
LINC00472-206ENST00000602878 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
LINC00472-206ENST00000602878 TMEM131LA2VDJ0 1609 aa17.59■□□□□ 0.41
LINC00472-206ENST00000602878 UBAP1LF5GYI3 381 aa17.59■□□□□ 0.41
LINC00472-206ENST00000602878 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
LINC00472-206ENST00000602878 SPHKAPQ2M3C7 1700 aa17.57■□□□□ 0.4
LINC00472-206ENST00000602878 BCANQ96GW7 911 aa17.55■□□□□ 0.4
LINC00472-206ENST00000602878 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
LINC00472-206ENST00000602878 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
LINC00472-206ENST00000602878 HDGFP51858 240 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms