RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 FOXD1Q16676 465 aa32.04■■■□□ 2.72
PPFIA3-211ENST00000602848 FRMPD1Q5SYB0 1578 aa32.03■■■□□ 2.72
PPFIA3-211ENST00000602848 IQGAP3Q86VI3 1631 aa32.02■■■□□ 2.72
PPFIA3-211ENST00000602848 DHX29Q7Z478 1369 aaKnown RBP32.02■■■□□ 2.72
PPFIA3-211ENST00000602848 KIDINS220Q9ULH0 1771 aa32■■■□□ 2.71
PPFIA3-211ENST00000602848 RICTORQ6R327 1708 aa32■■■□□ 2.71
PPFIA3-211ENST00000602848 EIF2AK4Q9P2K8 1649 aaKnown RBP32■■■□□ 2.71
PPFIA3-211ENST00000602848 MYT1LQ9UL68 1186 aa31.97■■■□□ 2.71
PPFIA3-211ENST00000602848 RAPGEF3O95398 923 aa31.96■■■□□ 2.71
PPFIA3-211ENST00000602848 HECW2Q9P2P5 1572 aa31.96■■■□□ 2.71
PPFIA3-211ENST00000602848 DEPDC5O75140 1603 aa31.94■■■□□ 2.7
PPFIA3-211ENST00000602848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.9■■■□□ 2.7
PPFIA3-211ENST00000602848 A2MP01023 1474 aa31.89■■■□□ 2.7
PPFIA3-211ENST00000602848 ZMYM4Q5VZL5 1548 aa31.87■■■□□ 2.69
PPFIA3-211ENST00000602848 KANK1Q14678 1352 aa31.87■■■□□ 2.69
PPFIA3-211ENST00000602848 L3MBTL2Q969R5 705 aa31.85■■■□□ 2.69
PPFIA3-211ENST00000602848 VWDEQ8N2E2 1590 aa31.83■■■□□ 2.69
PPFIA3-211ENST00000602848 ATP10AO60312 1499 aa31.83■■■□□ 2.69
PPFIA3-211ENST00000602848 KIF3BO15066 747 aa31.82■■■□□ 2.68
PPFIA3-211ENST00000602848 BCORL1Q5H9F3 1711 aa31.81■■■□□ 2.68
PPFIA3-211ENST00000602848 PRDM15P57071 1507 aaPredicted RBP31.81■■■□□ 2.68
PPFIA3-211ENST00000602848 DIEXFQ68CQ4 756 aaKnown RBP31.78■■■□□ 2.68
PPFIA3-211ENST00000602848 ABCA6Q8N139 1617 aa31.78■■■□□ 2.68
PPFIA3-211ENST00000602848 RNF17Q9BXT8 1623 aaKnown RBP31.77■■■□□ 2.68
PPFIA3-211ENST00000602848 TET3O43151 1660 aa31.76■■■□□ 2.68
PPFIA3-211ENST00000602848 MROH1Q8NDA8 1641 aa31.74■■■□□ 2.67
PPFIA3-211ENST00000602848 DIP2CQ9Y2E4 1556 aa31.73■■■□□ 2.67
PPFIA3-211ENST00000602848 CCDC144AA2RUR9 1427 aa31.73■■■□□ 2.67
PPFIA3-211ENST00000602848 YEATS2Q9ULM3 1422 aa31.73■■■□□ 2.67
PPFIA3-211ENST00000602848 PLA2R1Q13018 1463 aa31.72■■■□□ 2.67
PPFIA3-211ENST00000602848 ARHGEF40Q8TER5 1519 aa31.72■■■□□ 2.67
PPFIA3-211ENST00000602848 LMTK2Q8IWU2 1503 aa31.71■■■□□ 2.67
PPFIA3-211ENST00000602848 E9PCH4 1651 aa31.68■■■□□ 2.66
PPFIA3-211ENST00000602848 PTPRTO14522 1441 aa31.65■■■□□ 2.66
PPFIA3-211ENST00000602848 TRPM2O94759 1503 aa31.61■■■□□ 2.65
PPFIA3-211ENST00000602848 UHRF1BP1Q6BDS2 1440 aa31.61■■■□□ 2.65
PPFIA3-211ENST00000602848 EFCAB6Q5THR3 1501 aa31.59■■■□□ 2.65
PPFIA3-211ENST00000602848 SIGLEC1Q9BZZ2 1709 aa31.59■■■□□ 2.65
PPFIA3-211ENST00000602848 REREQ9P2R6 1566 aa31.59■■■□□ 2.65
PPFIA3-211ENST00000602848 SPHKAPQ2M3C7 1700 aa31.58■■■□□ 2.65
PPFIA3-211ENST00000602848 NBPF8Q3BBV2 869 aa31.57■■■□□ 2.64
PPFIA3-211ENST00000602848 GGT6Q6P531 493 aa31.53■■■□□ 2.64
PPFIA3-211ENST00000602848 AGLP35573 1532 aa31.51■■■□□ 2.63
PPFIA3-211ENST00000602848 EIF4G2P78344 907 aaKnown RBP eCLIP31.5■■■□□ 2.63
PPFIA3-211ENST00000602848 CEP152O94986 1710 aa31.5■■■□□ 2.63
PPFIA3-211ENST00000602848 NEURL4Q96JN8 1562 aa31.5■■■□□ 2.63
PPFIA3-211ENST00000602848 STAC3Q96MF2 364 aa31.49■■■□□ 2.63
PPFIA3-211ENST00000602848 ABCC3O15438 1527 aa31.49■■■□□ 2.63
PPFIA3-211ENST00000602848 ZC3H13Q5T200 1668 aaKnown RBP31.49■■■□□ 2.63
PPFIA3-211ENST00000602848 WASHC2CQ9Y4E1 1318 aa31.48■■■□□ 2.63
PPFIA3-211ENST00000602848 DCAF11Q8TEB1 546 aa31.47■■■□□ 2.63
PPFIA3-211ENST00000602848 PPP6R1Q9UPN7 881 aa31.47■■■□□ 2.63
PPFIA3-211ENST00000602848 SPATA31E1Q6ZUB1 1445 aa31.46■■■□□ 2.63
PPFIA3-211ENST00000602848 ARHGAP31Q2M1Z3 1444 aa31.44■■■□□ 2.62
PPFIA3-211ENST00000602848 RALGAPBQ86X10 1494 aa31.44■■■□□ 2.62
PPFIA3-211ENST00000602848 CLTCL1P53675 1640 aa31.42■■■□□ 2.62
PPFIA3-211ENST00000602848 HSPA5P11021 654 aaKnown RBP31.41■■■□□ 2.62
PPFIA3-211ENST00000602848 CAMSAP1Q5T5Y3 1602 aa31.4■■■□□ 2.62
PPFIA3-211ENST00000602848 NPATQ14207 1427 aa31.4■■■□□ 2.62
PPFIA3-211ENST00000602848 CNTLNQ9NXG0 1405 aa31.39■■■□□ 2.62
PPFIA3-211ENST00000602848 RGL3Q3MIN7 710 aa31.38■■■□□ 2.61
PPFIA3-211ENST00000602848 KDM2AQ9Y2K7 1162 aa31.38■■■□□ 2.61
PPFIA3-211ENST00000602848 PRAG1Q86YV5 1406 aa31.37■■■□□ 2.61
PPFIA3-211ENST00000602848 ZNF326Q5BKZ1 582 aaKnown RBP31.35■■■□□ 2.61
PPFIA3-211ENST00000602848 ARID4BQ4LE39 1312 aaPredicted RBP31.33■■■□□ 2.61
PPFIA3-211ENST00000602848 NOS1P29475 1434 aa31.32■■■□□ 2.6
PPFIA3-211ENST00000602848 HIRIP3Q9BW71 556 aaPredicted RBP31.31■■■□□ 2.6
PPFIA3-211ENST00000602848 KIF1BO60333 1816 aa31.31■■■□□ 2.6
PPFIA3-211ENST00000602848 ADAMTSL3P82987 1691 aa31.3■■■□□ 2.6
PPFIA3-211ENST00000602848 TRPM1Q7Z4N2 1603 aa31.28■■■□□ 2.6
PPFIA3-211ENST00000602848 KDM4FA0A1W2PPD8 638 aa31.27■■■□□ 2.6
PPFIA3-211ENST00000602848 GPRASP1Q5JY77 1395 aa31.25■■■□□ 2.59
PPFIA3-211ENST00000602848 CARD11Q9BXL7 1154 aa31.24■■■□□ 2.59
PPFIA3-211ENST00000602848 USP47Q96K76 1375 aa31.24■■■□□ 2.59
PPFIA3-211ENST00000602848 LAMC1P11047 1609 aa31.24■■■□□ 2.59
PPFIA3-211ENST00000602848 MLECQ14165 292 aa31.23■■■□□ 2.59
PPFIA3-211ENST00000602848 ROCK2O75116 1388 aaKnown RBP31.22■■■□□ 2.59
PPFIA3-211ENST00000602848 MIER1Q8N108 512 aa31.21■■■□□ 2.59
PPFIA3-211ENST00000602848 MADDQ8WXG6 1647 aa31.21■■■□□ 2.59
PPFIA3-211ENST00000602848 UGGT1Q9NYU2 1555 aa31.21■■■□□ 2.59
PPFIA3-211ENST00000602848 ADGRB3O60242 1522 aa31.21■■■□□ 2.59
PPFIA3-211ENST00000602848 DDX10Q13206 875 aaKnown RBP31.2■■■□□ 2.59
PPFIA3-211ENST00000602848 PIK3C2BO00750 1634 aa31.19■■■□□ 2.58
PPFIA3-211ENST00000602848 MYOM2P54296 1465 aa31.19■■■□□ 2.58
PPFIA3-211ENST00000602848 SLC52A1Q9NWF4 448 aa31.19■■■□□ 2.58
PPFIA3-211ENST00000602848 RPGRIP1LQ68CZ1 1315 aa31.18■■■□□ 2.58
PPFIA3-211ENST00000602848 FER1L4A9Z1Z3 1794 aa31.17■■■□□ 2.58
PPFIA3-211ENST00000602848 SYNMO15061 1565 aa31.15■■■□□ 2.58
PPFIA3-211ENST00000602848 POLR1AO95602 1720 aaPredicted RBP31.14■■■□□ 2.58
PPFIA3-211ENST00000602848 PREX1Q8TCU6 1659 aa31.14■■■□□ 2.58
PPFIA3-211ENST00000602848 CFAP65Q6ZU64 1925 aaKnown RBP31.14■■■□□ 2.58
PPFIA3-211ENST00000602848 WASHC2AQ641Q2 1341 aa31.14■■■□□ 2.57
PPFIA3-211ENST00000602848 IFT172Q9UG01 1749 aa31.13■■■□□ 2.57
PPFIA3-211ENST00000602848 KIAA1210Q9ULL0 1709 aa31.12■■■□□ 2.57
PPFIA3-211ENST00000602848 CCDC7Q96M83 1385 aa31.12■■■□□ 2.57
PPFIA3-211ENST00000602848 RIMS1Q86UR5 1692 aaKnown RBP31.12■■■□□ 2.57
PPFIA3-211ENST00000602848 MROH2AA6NES4 1674 aa31.11■■■□□ 2.57
PPFIA3-211ENST00000602848 CLTCQ00610 1675 aaKnown RBP31.1■■■□□ 2.57
PPFIA3-211ENST00000602848 NBPF1Q3BBV0 1214 aa31.08■■■□□ 2.57
PPFIA3-211ENST00000602848 ERVK-7P63135 1459 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms