RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 ZFRQ96KR1 1074 aaKnown RBP8.13□□□□□ -1.11
SGMS1-207ENST00000602619 RYDENQ9NUL5 291 aaKnown RBP8.13□□□□□ -1.11
SGMS1-207ENST00000602619 KIAA1468Q9P260 1216 aa8.13□□□□□ -1.11
SGMS1-207ENST00000602619 LCE2BO14633 110 aa8.12□□□□□ -1.11
SGMS1-207ENST00000602619 KCNC4Q03721 635 aa8.12□□□□□ -1.11
SGMS1-207ENST00000602619 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
SGMS1-207ENST00000602619 DDX27Q96GQ7 796 aaKnown RBP8.12□□□□□ -1.11
SGMS1-207ENST00000602619 EMILIN3Q9NT22 766 aa8.12□□□□□ -1.11
SGMS1-207ENST00000602619 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
SGMS1-207ENST00000602619 MFSD10Q14728 455 aa8.09□□□□□ -1.11
SGMS1-207ENST00000602619 PHF14O94880 888 aa8.08□□□□□ -1.12
SGMS1-207ENST00000602619 TYW1BQ6NUM6 668 aa8.08□□□□□ -1.12
SGMS1-207ENST00000602619 FBXW7Q969H0 707 aa8.08□□□□□ -1.12
SGMS1-207ENST00000602619 SEPT9Q9UHD8 586 aaPredicted RBP8.08□□□□□ -1.12
SGMS1-207ENST00000602619 ONECUT3O60422 494 aaPredicted RBP8.07□□□□□ -1.12
SGMS1-207ENST00000602619 GFRA3O60609 400 aa8.06□□□□□ -1.12
SGMS1-207ENST00000602619 LAPTM4AQ15012 233 aa8.06□□□□□ -1.12
SGMS1-207ENST00000602619 C6orf132Q5T0Z8 1188 aa8.06□□□□□ -1.12
SGMS1-207ENST00000602619 TRAF7Q6Q0C0 670 aa8.06□□□□□ -1.12
SGMS1-207ENST00000602619 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
SGMS1-207ENST00000602619 RTN4Q9NQC3 1192 aaKnown RBP8.04□□□□□ -1.12
SGMS1-207ENST00000602619 TSR3Q9UJK0 312 aaKnown RBP8.04□□□□□ -1.12
SGMS1-207ENST00000602619 TRIM6-TRIM34B2RNG4 842 aa8.03□□□□□ -1.12
SGMS1-207ENST00000602619 FAM98CQ17RN3 349 aaKnown RBP8.03□□□□□ -1.12
SGMS1-207ENST00000602619 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
SGMS1-207ENST00000602619 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.02□□□□□ -1.13
SGMS1-207ENST00000602619 LRCH3Q96II8 777 aa8□□□□□ -1.13
SGMS1-207ENST00000602619 EPAS1Q99814 870 aa8□□□□□ -1.13
SGMS1-207ENST00000602619 TJAP1Q5JTD0 557 aa7.98□□□□□ -1.13
SGMS1-207ENST00000602619 CADPS2Q86UW7 1296 aa7.98□□□□□ -1.13
SGMS1-207ENST00000602619 RBM33Q96EV2 1170 aaKnown RBP7.98□□□□□ -1.13
SGMS1-207ENST00000602619 PRKD2Q9BZL6 878 aa7.97□□□□□ -1.13
SGMS1-207ENST00000602619 NRG2O14511 850 aaPredicted RBP7.96□□□□□ -1.14
SGMS1-207ENST00000602619 PPP4CP60510 307 aa7.96□□□□□ -1.14
SGMS1-207ENST00000602619 TSKSQ9UJT2 592 aa7.96□□□□□ -1.14
SGMS1-207ENST00000602619 DPYSL4O14531 572 aa7.94□□□□□ -1.14
SGMS1-207ENST00000602619 CAMK2BQ13554 666 aa7.94□□□□□ -1.14
SGMS1-207ENST00000602619 PPP1R18Q6NYC8 613 aa7.94□□□□□ -1.14
SGMS1-207ENST00000602619 DDX12PQ92771 950 aa7.94□□□□□ -1.14
SGMS1-207ENST00000602619 PACS2Q86VP3 889 aa7.93□□□□□ -1.14
SGMS1-207ENST00000602619 TSR1Q2NL82 804 aaKnown RBP7.92□□□□□ -1.14
SGMS1-207ENST00000602619 ZNF787Q6DD87 383 aa7.91□□□□□ -1.14
SGMS1-207ENST00000602619 SAMD7Q7Z3H4 446 aa7.91□□□□□ -1.14
SGMS1-207ENST00000602619 MTRQ99707 1265 aa7.91□□□□□ -1.14
SGMS1-207ENST00000602619 V9GY48 417 aaPredicted RBP7.91□□□□□ -1.14
SGMS1-207ENST00000602619 SMAPO00193 183 aa7.9□□□□□ -1.14
SGMS1-207ENST00000602619 ZNF516Q92618 1163 aa7.9□□□□□ -1.14
SGMS1-207ENST00000602619 IL21Q9HBE4 155 aa7.89□□□□□ -1.15
SGMS1-207ENST00000602619 C3orf80F5H4A9 247 aa7.88□□□□□ -1.15
SGMS1-207ENST00000602619 EN1Q05925 392 aaPredicted RBP7.88□□□□□ -1.15
SGMS1-207ENST00000602619 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.88□□□□□ -1.15
SGMS1-207ENST00000602619 FAM198AQ9UFP1 575 aa7.88□□□□□ -1.15
SGMS1-207ENST00000602619 MAP3K7O43318 606 aa7.87□□□□□ -1.15
SGMS1-207ENST00000602619 NBR1Q14596 966 aa7.87□□□□□ -1.15
SGMS1-207ENST00000602619 ZNF775Q96BV0 537 aaPredicted RBP7.87□□□□□ -1.15
SGMS1-207ENST00000602619 CDCA7LQ96GN5 454 aa7.87□□□□□ -1.15
SGMS1-207ENST00000602619 NKX2-3Q8TAU0 364 aa7.86□□□□□ -1.15
SGMS1-207ENST00000602619 PDZRN3Q9UPQ7 1066 aa7.86□□□□□ -1.15
SGMS1-207ENST00000602619 PRSS12P56730 875 aa7.85□□□□□ -1.15
SGMS1-207ENST00000602619 TATDN2Q93075 761 aa7.84□□□□□ -1.15
SGMS1-207ENST00000602619 APLP1P51693 650 aa7.83□□□□□ -1.16
SGMS1-207ENST00000602619 PRIM1P49642 420 aaKnown RBP7.82□□□□□ -1.16
SGMS1-207ENST00000602619 PNMA3Q9UL41 463 aa7.82□□□□□ -1.16
SGMS1-207ENST00000602619 PDIA6Q15084 440 aa7.8□□□□□ -1.16
SGMS1-207ENST00000602619 NUDT18Q6ZVK8 323 aa7.79□□□□□ -1.16
SGMS1-207ENST00000602619 RNF40O75150 1001 aa7.78□□□□□ -1.16
SGMS1-207ENST00000602619 CERKQ8TCT0 537 aa7.78□□□□□ -1.16
SGMS1-207ENST00000602619 NBPF26B4DH59 902 aa7.77□□□□□ -1.17
SGMS1-207ENST00000602619 HDGFP51858 240 aaKnown RBP7.77□□□□□ -1.17
SGMS1-207ENST00000602619 COPS2P61201 443 aa7.77□□□□□ -1.17
SGMS1-207ENST00000602619 TRIM67Q6ZTA4 783 aa7.77□□□□□ -1.17
SGMS1-207ENST00000602619 GGCXP38435 758 aa7.76□□□□□ -1.17
SGMS1-207ENST00000602619 TMUB1Q9BVT8 246 aa7.76□□□□□ -1.17
SGMS1-207ENST00000602619 SPDYE16A6NNV3 312 aaPredicted RBP7.75□□□□□ -1.17
SGMS1-207ENST00000602619 POTECB2RU33 542 aa7.75□□□□□ -1.17
SGMS1-207ENST00000602619 EMID1Q96A84 441 aaPredicted RBP7.74□□□□□ -1.17
SGMS1-207ENST00000602619 GRXCR2A6NFK2 248 aa7.73□□□□□ -1.17
SGMS1-207ENST00000602619 ZPR1O75312 459 aa7.73□□□□□ -1.17
SGMS1-207ENST00000602619 DCAF8L2P0C7V8 631 aa7.73□□□□□ -1.17
SGMS1-207ENST00000602619 MYT1Q01538 1121 aa7.73□□□□□ -1.17
SGMS1-207ENST00000602619 SWT1Q5T5J6 900 aaKnown RBP7.73□□□□□ -1.17
SGMS1-207ENST00000602619 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
SGMS1-207ENST00000602619 SLC19A1P41440 591 aa7.72□□□□□ -1.17
SGMS1-207ENST00000602619 RNF223E7ERA6 249 aa7.71□□□□□ -1.18
SGMS1-207ENST00000602619 OSBPP22059 807 aa7.71□□□□□ -1.18
SGMS1-207ENST00000602619 PKDCCQ504Y2 493 aa7.7□□□□□ -1.18
SGMS1-207ENST00000602619 TTC13Q8NBP0 860 aa7.7□□□□□ -1.18
SGMS1-207ENST00000602619 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
SGMS1-207ENST00000602619 RBM27Q9P2N5 1060 aaKnown RBP7.7□□□□□ -1.18
SGMS1-207ENST00000602619 DGAT1O75907 488 aa7.69□□□□□ -1.18
SGMS1-207ENST00000602619 SPRYD7Q5W111 196 aa7.69□□□□□ -1.18
SGMS1-207ENST00000602619 SLF2Q8IX21 1173 aa7.69□□□□□ -1.18
SGMS1-207ENST00000602619 NPDC1Q9NQX5 325 aaPredicted RBP7.68□□□□□ -1.18
SGMS1-207ENST00000602619 ZNF598Q86UK7 904 aaKnown RBP7.67□□□□□ -1.18
SGMS1-207ENST00000602619 PRR20EP86478 221 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 PRR20CP86479 221 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 PRR20DP86480 221 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 PRR20BP86481 221 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 PRR20AP86496 221 aa7.66□□□□□ -1.18
SGMS1-207ENST00000602619 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms