RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
SBNO1-203ENST00000602398 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
SBNO1-203ENST00000602398 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
SBNO1-203ENST00000602398 THOC2Q8NI27 1593 aaKnown RBP11.87□□□□□ -0.51
SBNO1-203ENST00000602398 ATP10BO94823 1461 aa11.87□□□□□ -0.51
SBNO1-203ENST00000602398 PRAM1Q96QH2 718 aa11.87□□□□□ -0.51
SBNO1-203ENST00000602398 WAPLQ7Z5K2 1190 aa11.86□□□□□ -0.51
SBNO1-203ENST00000602398 SLC12A5Q9H2X9 1139 aa11.86□□□□□ -0.51
SBNO1-203ENST00000602398 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
SBNO1-203ENST00000602398 TCERG1O14776 1098 aaKnown RBP11.86□□□□□ -0.51
SBNO1-203ENST00000602398 AMPHP49418 695 aa11.85□□□□□ -0.51
SBNO1-203ENST00000602398 DAPK1P53355 1430 aa11.85□□□□□ -0.51
SBNO1-203ENST00000602398 IDI1Q13907 227 aa11.85□□□□□ -0.51
SBNO1-203ENST00000602398 EFCAB5A4FU69 1503 aa11.85□□□□□ -0.51
SBNO1-203ENST00000602398 HSPA2P54652 639 aa11.85□□□□□ -0.51
SBNO1-203ENST00000602398 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
SBNO1-203ENST00000602398 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
SBNO1-203ENST00000602398 BCL2L13Q9BXK5 485 aa11.84□□□□□ -0.51
SBNO1-203ENST00000602398 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
SBNO1-203ENST00000602398 ZNF428Q96B54 188 aa11.84□□□□□ -0.51
SBNO1-203ENST00000602398 ASXL2Q76L83 1435 aa11.84□□□□□ -0.51
SBNO1-203ENST00000602398 APBB1O00213 710 aa11.83□□□□□ -0.52
SBNO1-203ENST00000602398 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
SBNO1-203ENST00000602398 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
SBNO1-203ENST00000602398 CLUAP1Q96AJ1 413 aa11.82□□□□□ -0.52
SBNO1-203ENST00000602398 TERF2IPQ9NYB0 399 aa11.82□□□□□ -0.52
SBNO1-203ENST00000602398 ABCC5O15440 1437 aa11.82□□□□□ -0.52
SBNO1-203ENST00000602398 NAIPQ13075 1403 aa11.82□□□□□ -0.52
SBNO1-203ENST00000602398 PSME1Q06323 249 aa11.82□□□□□ -0.52
SBNO1-203ENST00000602398 PTPRKQ15262 1439 aa11.82□□□□□ -0.52
SBNO1-203ENST00000602398 PROSER2Q86WR7 435 aaPredicted RBP11.82□□□□□ -0.52
SBNO1-203ENST00000602398 KTN1Q86UP2 1357 aaKnown RBP11.81□□□□□ -0.52
SBNO1-203ENST00000602398 ESCO1Q5FWF5 840 aa11.81□□□□□ -0.52
SBNO1-203ENST00000602398 KIF7Q2M1P5 1343 aa11.81□□□□□ -0.52
SBNO1-203ENST00000602398 NUP153P49790 1475 aaKnown RBP11.81□□□□□ -0.52
SBNO1-203ENST00000602398 PLEKHH2Q8IVE3 1493 aa11.81□□□□□ -0.52
SBNO1-203ENST00000602398 HMOX1P09601 288 aa11.81□□□□□ -0.52
SBNO1-203ENST00000602398 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
SBNO1-203ENST00000602398 HECW1Q76N89 1606 aa11.8□□□□□ -0.52
SBNO1-203ENST00000602398 FANCAO15360 1455 aa11.8□□□□□ -0.52
SBNO1-203ENST00000602398 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
SBNO1-203ENST00000602398 RGS3P49796 1198 aa11.79□□□□□ -0.52
SBNO1-203ENST00000602398 NECTIN2Q92692 538 aa11.79□□□□□ -0.52
SBNO1-203ENST00000602398 CUL7Q14999 1698 aa11.79□□□□□ -0.52
SBNO1-203ENST00000602398 EHBP1L1Q8N3D4 1523 aa11.79□□□□□ -0.52
SBNO1-203ENST00000602398 FBLN1P23142 703 aa11.79□□□□□ -0.52
SBNO1-203ENST00000602398 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
SBNO1-203ENST00000602398 CAMSAP2Q08AD1 1489 aa11.79□□□□□ -0.52
SBNO1-203ENST00000602398 C11orf95C9JLR9 678 aaPredicted RBP11.78□□□□□ -0.52
SBNO1-203ENST00000602398 ADGRF5Q8IZF2 1346 aa11.78□□□□□ -0.52
SBNO1-203ENST00000602398 NPHP1O15259 732 aa11.78□□□□□ -0.52
SBNO1-203ENST00000602398 PRKRIP1Q9H875 184 aaPredicted RBP11.78□□□□□ -0.52
SBNO1-203ENST00000602398 CABP1Q9NZU7 370 aa11.78□□□□□ -0.52
SBNO1-203ENST00000602398 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
SBNO1-203ENST00000602398 NLRP6P59044 892 aa11.77□□□□□ -0.53
SBNO1-203ENST00000602398 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
SBNO1-203ENST00000602398 CCDC184Q52MB2 194 aa11.77□□□□□ -0.53
SBNO1-203ENST00000602398 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.76□□□□□ -0.53
SBNO1-203ENST00000602398 NUTM2BA6NNL0 878 aaPredicted RBP11.76□□□□□ -0.53
SBNO1-203ENST00000602398 NUTM2EB1AL46 878 aaPredicted RBP11.76□□□□□ -0.53
SBNO1-203ENST00000602398 NUTM2AQ8IVF1 878 aaPredicted RBP11.76□□□□□ -0.53
SBNO1-203ENST00000602398 NGEFQ8N5V2 710 aa11.76□□□□□ -0.53
SBNO1-203ENST00000602398 RTF1Q92541 710 aaKnown RBP11.76□□□□□ -0.53
SBNO1-203ENST00000602398 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
SBNO1-203ENST00000602398 MIA2Q96PC5 1412 aa11.76□□□□□ -0.53
SBNO1-203ENST00000602398 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
SBNO1-203ENST00000602398 PLIN1O60240 522 aa11.76□□□□□ -0.53
SBNO1-203ENST00000602398 ATF3P18847 181 aa11.76□□□□□ -0.53
SBNO1-203ENST00000602398 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
SBNO1-203ENST00000602398 HFM1A2PYH4 1435 aa11.75□□□□□ -0.53
SBNO1-203ENST00000602398 APAF1O14727 1248 aa11.75□□□□□ -0.53
SBNO1-203ENST00000602398 NCOA1Q15788 1441 aa11.75□□□□□ -0.53
SBNO1-203ENST00000602398 COG3Q96JB2 828 aa11.75□□□□□ -0.53
SBNO1-203ENST00000602398 THEMISQ8N1K5 641 aaPredicted RBP11.74□□□□□ -0.53
SBNO1-203ENST00000602398 EIF3AQ14152 1382 aaKnown RBP11.74□□□□□ -0.53
SBNO1-203ENST00000602398 WDR62O43379 1518 aa11.74□□□□□ -0.53
SBNO1-203ENST00000602398 AKNAQ7Z591 1439 aa11.73□□□□□ -0.53
SBNO1-203ENST00000602398 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
SBNO1-203ENST00000602398 ERBINQ96RT1 1412 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 EVA1CP58658 441 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 NLRP13Q86W25 1043 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 FOXO3O43524 673 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 ADAMTS12P58397 1594 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 DISP1Q96F81 1524 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 CCDC141Q6ZP82 1450 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
SBNO1-203ENST00000602398 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
SBNO1-203ENST00000602398 KIAA1107Q9UPP5 1409 aa11.71□□□□□ -0.53
SBNO1-203ENST00000602398 STRN4Q9NRL3 753 aa11.71□□□□□ -0.53
SBNO1-203ENST00000602398 MTHFSP49914 203 aa11.71□□□□□ -0.54
SBNO1-203ENST00000602398 ZC3H6P61129 1189 aaKnown RBP11.71□□□□□ -0.54
SBNO1-203ENST00000602398 RRS1Q15050 365 aaKnown RBP11.71□□□□□ -0.54
SBNO1-203ENST00000602398 SLC4A10Q6U841 1118 aa11.7□□□□□ -0.54
SBNO1-203ENST00000602398 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
SBNO1-203ENST00000602398 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.69□□□□□ -0.54
SBNO1-203ENST00000602398 NLRP2Q9NX02 1062 aa11.69□□□□□ -0.54
SBNO1-203ENST00000602398 CGNL1Q0VF96 1302 aa11.69□□□□□ -0.54
SBNO1-203ENST00000602398 DENND4BO75064 1496 aaPredicted RBP11.68□□□□□ -0.54
SBNO1-203ENST00000602398 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms