RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 ARHGAP35Q9NRY4 1499 aa24.09■■□□□ 1.45
TRIM11-205ENST00000602308 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
TRIM11-205ENST00000602308 CDC42BPAQ5VT25 1732 aa24.09■■□□□ 1.45
TRIM11-205ENST00000602308 EEA1Q15075 1411 aa24.07■■□□□ 1.44
TRIM11-205ENST00000602308 INO80Q9ULG1 1556 aaPredicted RBP24.06■■□□□ 1.44
TRIM11-205ENST00000602308 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
TRIM11-205ENST00000602308 SYNMO15061 1565 aa24.03■■□□□ 1.44
TRIM11-205ENST00000602308 IQGAP1P46940 1657 aa24.02■■□□□ 1.44
TRIM11-205ENST00000602308 UPF1Q92900 1129 aaKnown RBP eCLIP24.02■■□□□ 1.44
TRIM11-205ENST00000602308 PZPP20742 1482 aa24■■□□□ 1.43
TRIM11-205ENST00000602308 UGGT1Q9NYU2 1555 aa24■■□□□ 1.43
TRIM11-205ENST00000602308 KIAA1107Q9UPP5 1409 aa24■■□□□ 1.43
TRIM11-205ENST00000602308 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
TRIM11-205ENST00000602308 FAM135AQ9P2D6 1515 aa23.99■■□□□ 1.43
TRIM11-205ENST00000602308 GPATCH8Q9UKJ3 1502 aaKnown RBP23.99■■□□□ 1.43
TRIM11-205ENST00000602308 SRCAPQ6ZRS2 3230 aa23.99■■□□□ 1.43
TRIM11-205ENST00000602308 FAM135BQ49AJ0 1406 aa23.98■■□□□ 1.43
TRIM11-205ENST00000602308 NLRP1Q9C000 1473 aa23.96■■□□□ 1.43
TRIM11-205ENST00000602308 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
TRIM11-205ENST00000602308 ADGBQ8N7X0 1667 aa23.94■■□□□ 1.42
TRIM11-205ENST00000602308 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
TRIM11-205ENST00000602308 CCDC18Q5T9S5 1454 aa23.91■■□□□ 1.42
TRIM11-205ENST00000602308 PLEKHH2Q8IVE3 1493 aa23.91■■□□□ 1.42
TRIM11-205ENST00000602308 DHX29Q7Z478 1369 aaKnown RBP23.91■■□□□ 1.42
TRIM11-205ENST00000602308 CFDP1Q9UEE9 299 aaPredicted RBP23.9■■□□□ 1.42
TRIM11-205ENST00000602308 KIF3BO15066 747 aa23.89■■□□□ 1.41
TRIM11-205ENST00000602308 KDM5DQ9BY66 1539 aa23.89■■□□□ 1.41
TRIM11-205ENST00000602308 XIRP1Q702N8 1843 aaKnown RBP23.89■■□□□ 1.41
TRIM11-205ENST00000602308 WASHC2CQ9Y4E1 1318 aa23.88■■□□□ 1.41
TRIM11-205ENST00000602308 ZC3H13Q5T200 1668 aaKnown RBP23.87■■□□□ 1.41
TRIM11-205ENST00000602308 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
TRIM11-205ENST00000602308 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
TRIM11-205ENST00000602308 ZNF644Q9H582 1327 aaPredicted RBP23.82■■□□□ 1.4
TRIM11-205ENST00000602308 RTEL1-TNFRSF6BF6WH68 1400 aa23.81■■□□□ 1.4
TRIM11-205ENST00000602308 ROBO1Q9Y6N7 1651 aa23.8■■□□□ 1.4
TRIM11-205ENST00000602308 LTKP29376 864 aa23.79■■□□□ 1.4
TRIM11-205ENST00000602308 MBD5Q9P267 1494 aa23.79■■□□□ 1.4
TRIM11-205ENST00000602308 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
TRIM11-205ENST00000602308 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.4
TRIM11-205ENST00000602308 TMEM94Q12767 1356 aa23.77■■□□□ 1.4
TRIM11-205ENST00000602308 JCADQ9P266 1359 aa23.75■■□□□ 1.39
TRIM11-205ENST00000602308 TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
TRIM11-205ENST00000602308 ZNF772Q68DY9 489 aaPredicted RBP23.71■■□□□ 1.39
TRIM11-205ENST00000602308 RBM33Q96EV2 1170 aaKnown RBP23.71■■□□□ 1.39
TRIM11-205ENST00000602308 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
TRIM11-205ENST00000602308 LRP6O75581 1613 aa23.7■■□□□ 1.38
TRIM11-205ENST00000602308 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
TRIM11-205ENST00000602308 MAP3K1Q13233 1512 aa23.69■■□□□ 1.38
TRIM11-205ENST00000602308 ARHGAP23Q9P227 1491 aa23.68■■□□□ 1.38
TRIM11-205ENST00000602308 ERVK-7P63135 1459 aa23.68■■□□□ 1.38
TRIM11-205ENST00000602308 UBR1Q8IWV7 1749 aa23.67■■□□□ 1.38
TRIM11-205ENST00000602308 LRRC9Q6ZRR7 1453 aa23.66■■□□□ 1.38
TRIM11-205ENST00000602308 FYCO1Q9BQS8 1478 aa23.66■■□□□ 1.38
TRIM11-205ENST00000602308 SLIT1O75093 1534 aa23.65■■□□□ 1.38
TRIM11-205ENST00000602308 PHLPP1O60346 1717 aa23.65■■□□□ 1.38
TRIM11-205ENST00000602308 RXRBP28702 533 aa23.65■■□□□ 1.38
TRIM11-205ENST00000602308 PROSER2Q86WR7 435 aaPredicted RBP23.64■■□□□ 1.37
TRIM11-205ENST00000602308 KCNA6P17658 529 aa23.63■■□□□ 1.37
TRIM11-205ENST00000602308 MEX3CQ5U5Q3 659 aaKnown RBP23.63■■□□□ 1.37
TRIM11-205ENST00000602308 SLAIN2Q9P270 581 aa23.62■■□□□ 1.37
TRIM11-205ENST00000602308 ABCC3O15438 1527 aa23.62■■□□□ 1.37
TRIM11-205ENST00000602308 SPATA31A6Q5VVP1 1343 aa23.6■■□□□ 1.37
TRIM11-205ENST00000602308 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
TRIM11-205ENST00000602308 CDK12Q9NYV4 1490 aaPredicted RBP23.59■■□□□ 1.37
TRIM11-205ENST00000602308 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
TRIM11-205ENST00000602308 TIAM1Q13009 1591 aa23.58■■□□□ 1.37
TRIM11-205ENST00000602308 CCDC141Q6ZP82 1450 aa23.57■■□□□ 1.36
TRIM11-205ENST00000602308 PRDM15P57071 1507 aaPredicted RBP23.56■■□□□ 1.36
TRIM11-205ENST00000602308 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
TRIM11-205ENST00000602308 FGD6Q6ZV73 1430 aa23.55■■□□□ 1.36
TRIM11-205ENST00000602308 MSH6P52701 1360 aa23.54■■□□□ 1.36
TRIM11-205ENST00000602308 SLC26A8Q96RN1 970 aa23.53■■□□□ 1.36
TRIM11-205ENST00000602308 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
TRIM11-205ENST00000602308 CFAP65Q6ZU64 1925 aaKnown RBP23.52■■□□□ 1.36
TRIM11-205ENST00000602308 RSPH4AQ5TD94 716 aa23.5■■□□□ 1.35
TRIM11-205ENST00000602308 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
TRIM11-205ENST00000602308 TET3O43151 1660 aa23.48■■□□□ 1.35
TRIM11-205ENST00000602308 RGS12O14924 1447 aa23.47■■□□□ 1.35
TRIM11-205ENST00000602308 MROH1Q8NDA8 1641 aa23.45■■□□□ 1.34
TRIM11-205ENST00000602308 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.34
TRIM11-205ENST00000602308 AFF2P51816 1311 aa23.45■■□□□ 1.34
TRIM11-205ENST00000602308 NWD1Q149M9 1564 aa23.44■■□□□ 1.34
TRIM11-205ENST00000602308 NUTM2BA6NNL0 878 aaPredicted RBP23.43■■□□□ 1.34
TRIM11-205ENST00000602308 NUTM2EB1AL46 878 aaPredicted RBP23.43■■□□□ 1.34
TRIM11-205ENST00000602308 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
TRIM11-205ENST00000602308 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
TRIM11-205ENST00000602308 NUTM2AQ8IVF1 878 aaPredicted RBP23.43■■□□□ 1.34
TRIM11-205ENST00000602308 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
TRIM11-205ENST00000602308 CEP152O94986 1710 aa23.42■■□□□ 1.34
TRIM11-205ENST00000602308 PIK3C2BO00750 1634 aa23.42■■□□□ 1.34
TRIM11-205ENST00000602308 ZRANB1Q9UGI0 708 aa23.42■■□□□ 1.34
TRIM11-205ENST00000602308 SETBP1Q9Y6X0 1596 aa23.41■■□□□ 1.34
TRIM11-205ENST00000602308 NUTM2DQ5VT03 806 aaPredicted RBP23.41■■□□□ 1.34
TRIM11-205ENST00000602308 STAG3Q9UJ98 1225 aa23.41■■□□□ 1.34
TRIM11-205ENST00000602308 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
TRIM11-205ENST00000602308 AHDC1Q5TGY3 1603 aaPredicted RBP23.38■■□□□ 1.33
TRIM11-205ENST00000602308 RBM6P78332 1123 aaKnown RBP23.38■■□□□ 1.33
TRIM11-205ENST00000602308 ARHGAP31Q2M1Z3 1444 aa23.38■■□□□ 1.33
TRIM11-205ENST00000602308 QTRT2Q9H974 415 aaKnown RBP23.37■■□□□ 1.33
TRIM11-205ENST00000602308 KDM5AP29375 1690 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms